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Moc11g25690 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc11g25690
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionRibonuclease H
Genome locationchr11:18803085..18805840
RNA-Seq ExpressionMoc11g25690
SyntenyMoc11g25690
Gene Ontology termsGO:0006807 - nitrogen compound metabolic process (biological process)
GO:0043170 - macromolecule metabolic process (biological process)
GO:0044238 - primary metabolic process (biological process)
GO:0016787 - hydrolase activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022149378.1 uncharacterized protein LOC111017809 [Momordica charantia]3.1e-2252.5Show/hide
Query:  MVEFMVVEAKSAYKVIFGRPIIHNLKVVPSTLHQMMKYPTPKGVGIIRGEQKTSRECYAVALK--PTCNTITRG---LNLKETGSIDERGRREL---AED
        M EF+V++ +SAY  IFGRP+IH+L+ VPSTLHQ +KY TP GVGI+RGEQ+ SRECYA ALK    C    +     +L+    + + G+RE     E+
Subjt:  MVEFMVVEAKSAYKVIFGRPIIHNLKVVPSTLHQMMKYPTPKGVGIIRGEQKTSRECYAVALK--PTCNTITRG---LNLKETGSIDERGRREL---AED

Query:  LELVPLLSLEKHGSSSTKLG
        LELVPLLS E+  S  TKLG
Subjt:  LELVPLLSLEKHGSSSTKLG
XP_022149985.1 uncharacterized protein LOC111018267 [Momordica charantia]2.8e-2355Show/hide
Query:  MVEFMVVEAKSAYKVIFGRPIIHNLKVVPSTLHQMMKYPTPKGVGIIRGEQKTSRECYAVALK-PTCNTITRGLN----LKETGSIDERGRRELA---ED
        M EF+V+  +SAY  IFGRPIIH+ + VPSTLHQ++KY TP GVG IRGEQKTSRECYA  LK  +   +    N    LK    + + G+RE +   E+
Subjt:  MVEFMVVEAKSAYKVIFGRPIIHNLKVVPSTLHQMMKYPTPKGVGIIRGEQKTSRECYAVALK-PTCNTITRGLN----LKETGSIDERGRRELA---ED

Query:  LELVPLLSLEKHGSSSTKLG
        LELVPLLSLE+  S  TKLG
Subjt:  LELVPLLSLEKHGSSSTKLG
XP_022156048.1 uncharacterized protein LOC111023016 [Momordica charantia]1.3e-2393.65Show/hide
Query:  VMENKNDLKRDKELKSEIIDWGRPARDVTGRSKERPNAGAENEESDWRRTNRAERARSRPLLG
        VMENKND KRDKELKSEIIDWGRPARDVTGR KERPNAGA+NEESDWRRTNRAERARSRP+LG
Subjt:  VMENKNDLKRDKELKSEIIDWGRPARDVTGRSKERPNAGAENEESDWRRTNRAERARSRPLLG
XP_022158219.1 protein NYNRIN-like [Momordica charantia]5.0e-2051.72Show/hide
Query:  MVEFMVVEAKSAYKVIFGRPIIHNLKVVPSTLHQMMKYPTPKGVGIIRGEQKTSRECYAVALK--PTCNTITRGLNLKETGSIDERGRRELA---EDLEL
        M EF+V++ +SAY  IFGRPIIH+ +VVPSTLHQ++KY TP GVG +RGEQ  SRECYA ALK    C         +      +  RRE +   E+LEL
Subjt:  MVEFMVVEAKSAYKVIFGRPIIHNLKVVPSTLHQMMKYPTPKGVGIIRGEQKTSRECYAVALK--PTCNTITRGLNLKETGSIDERGRRELA---EDLEL

Query:  VPLLSLEKHGSSSTKL
        VPLLSLEK   + ++L
Subjt:  VPLLSLEKHGSSSTKL
XP_022158414.1 uncharacterized protein LOC111024904 [Momordica charantia]1.3e-2050Show/hide
Query:  MVEFMVVEAKSAYKVIFGRPIIHNLKVVPSTLHQMMKYPTPKGVGIIRGEQKTSRECYAVALKPTC-----NTITRGLNLKETGSIDERGRREL---AED
        M EF+V++ +SAY  IFGRPIIH+ + VPSTLHQ++KY TP  VG++RGEQKTSRECYA ALK +          RG   +    + + G+R+     E+
Subjt:  MVEFMVVEAKSAYKVIFGRPIIHNLKVVPSTLHQMMKYPTPKGVGIIRGEQKTSRECYAVALKPTC-----NTITRGLNLKETGSIDERGRREL---AED

Query:  LELVPLLSLEKHGS
        LELVPLLS E+  +
Subjt:  LELVPLLSLEKHGS
TrEMBL top hitse value%identityAlignment
A0A6J1D6M1 Ribonuclease H1.5e-2252.5Show/hide
Query:  MVEFMVVEAKSAYKVIFGRPIIHNLKVVPSTLHQMMKYPTPKGVGIIRGEQKTSRECYAVALK--PTCNTITRG---LNLKETGSIDERGRREL---AED
        M EF+V++ +SAY  IFGRP+IH+L+ VPSTLHQ +KY TP GVGI+RGEQ+ SRECYA ALK    C    +     +L+    + + G+RE     E+
Subjt:  MVEFMVVEAKSAYKVIFGRPIIHNLKVVPSTLHQMMKYPTPKGVGIIRGEQKTSRECYAVALK--PTCNTITRG---LNLKETGSIDERGRREL---AED

Query:  LELVPLLSLEKHGSSSTKLG
        LELVPLLS E+  S  TKLG
Subjt:  LELVPLLSLEKHGSSSTKLG
A0A6J1D787 uncharacterized protein LOC1110182671.4e-2355Show/hide
Query:  MVEFMVVEAKSAYKVIFGRPIIHNLKVVPSTLHQMMKYPTPKGVGIIRGEQKTSRECYAVALK-PTCNTITRGLN----LKETGSIDERGRRELA---ED
        M EF+V+  +SAY  IFGRPIIH+ + VPSTLHQ++KY TP GVG IRGEQKTSRECYA  LK  +   +    N    LK    + + G+RE +   E+
Subjt:  MVEFMVVEAKSAYKVIFGRPIIHNLKVVPSTLHQMMKYPTPKGVGIIRGEQKTSRECYAVALK-PTCNTITRGLN----LKETGSIDERGRRELA---ED

Query:  LELVPLLSLEKHGSSSTKLG
        LELVPLLSLE+  S  TKLG
Subjt:  LELVPLLSLEKHGSSSTKLG
A0A6J1DPJ5 uncharacterized protein LOC1110230166.1e-2493.65Show/hide
Query:  VMENKNDLKRDKELKSEIIDWGRPARDVTGRSKERPNAGAENEESDWRRTNRAERARSRPLLG
        VMENKND KRDKELKSEIIDWGRPARDVTGR KERPNAGA+NEESDWRRTNRAERARSRP+LG
Subjt:  VMENKNDLKRDKELKSEIIDWGRPARDVTGRSKERPNAGAENEESDWRRTNRAERARSRPLLG
A0A6J1DYS0 Ribonuclease H2.4e-2051.72Show/hide
Query:  MVEFMVVEAKSAYKVIFGRPIIHNLKVVPSTLHQMMKYPTPKGVGIIRGEQKTSRECYAVALK--PTCNTITRGLNLKETGSIDERGRRELA---EDLEL
        M EF+V++ +SAY  IFGRPIIH+ +VVPSTLHQ++KY TP GVG +RGEQ  SRECYA ALK    C         +      +  RRE +   E+LEL
Subjt:  MVEFMVVEAKSAYKVIFGRPIIHNLKVVPSTLHQMMKYPTPKGVGIIRGEQKTSRECYAVALK--PTCNTITRGLNLKETGSIDERGRRELA---EDLEL

Query:  VPLLSLEKHGSSSTKL
        VPLLSLEK   + ++L
Subjt:  VPLLSLEKHGSSSTKL
A0A6J1DZB9 uncharacterized protein LOC1110249046.3e-2150Show/hide
Query:  MVEFMVVEAKSAYKVIFGRPIIHNLKVVPSTLHQMMKYPTPKGVGIIRGEQKTSRECYAVALKPTC-----NTITRGLNLKETGSIDERGRREL---AED
        M EF+V++ +SAY  IFGRPIIH+ + VPSTLHQ++KY TP  VG++RGEQKTSRECYA ALK +          RG   +    + + G+R+     E+
Subjt:  MVEFMVVEAKSAYKVIFGRPIIHNLKVVPSTLHQMMKYPTPKGVGIIRGEQKTSRECYAVALKPTC-----NTITRGLNLKETGSIDERGRREL---AED

Query:  LELVPLLSLEKHGS
        LELVPLLS E+  +
Subjt:  LELVPLLSLEKHGS
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTAGAGTTCATGGTGGTCGAGGCTAAGTCAGCATACAAAGTAATATTCGGTCGACCTATCATCCACAACCTGAAAGTTGTTCCATCTACACTGCACCAGATG
ATGAAGTACCCAACCCCCAAGGGAGTTGGGATAATACGAGGCGAGCAAAAGACCTCCAGGGAGTGCTATGCAGTAGCCCTTAAACCAACTTGCAACACCATCACT
AGGGGCCTCAATCTCAAAGAAACTGGATCAATCGACGAGCGAGGTCGCAGAGAACTTGCGGAAGACTTGGAACTCGTCCCATTACTCAGCCTAGAGAAACATGGG
AGCAGCAGCACGAAGCTTGGGCTAATCTGTCTAAGCTCAGATTCCAAACTAACTTGGGCGTCGGATTGTCCTACCTGTTCTTGTAGATTTCTTACTATAAGAATA
GACTTTGTTTGTATGACTTCTGTTATGGAGAACAAAAACGACCTGAAACGGGACAAGGAGTTGAAATCTGAGATCATTGATTGGGGGAGACCGGCCCGTGACGTA
ACGGGCCGGTCCAAAGAGCGACCTAATGCCGGGGCAGAGAACGAGGAAAGCGACTGGCGGAGAACTAACCGGGCCGAGAGGGCTCGGTCCCGACCCCTGCTCGGT
ATCGGTTCCCTTATCATCGAGTTTGGTGTGTGCGAGAAGAAGAGCCGGAGGGTCGAAATCCACGTATCAACAATTGGCGCCGTTTGTGGGGAACGATACAGTAAA
GCGAGCTGTGTCGAAGTGAAATCTCGATCTGAGGTGAAATTTCGATCCGAGGCGTGTAGAGTACAGCGGCTGACAATTTAG
mRNA sequenceShow/hide mRNA sequence
ATGGTAGAGTTCATGGTGGTCGAGGCTAAGTCAGCATACAAAGTAATATTCGGTCGACCTATCATCCACAACCTGAAAGTTGTTCCATCTACACTGCACCAGATG
ATGAAGTACCCAACCCCCAAGGGAGTTGGGATAATACGAGGCGAGCAAAAGACCTCCAGGGAGTGCTATGCAGTAGCCCTTAAACCAACTTGCAACACCATCACT
AGGGGCCTCAATCTCAAAGAAACTGGATCAATCGACGAGCGAGGTCGCAGAGAACTTGCGGAAGACTTGGAACTCGTCCCATTACTCAGCCTAGAGAAACATGGG
AGCAGCAGCACGAAGCTTGGGCTAATCTGTCTAAGCTCAGATTCCAAACTAACTTGGGCGTCGGATTGTCCTACCTGTTCTTGTAGATTTCTTACTATAAGAATA
GACTTTGTTTGTATGACTTCTGTTATGGAGAACAAAAACGACCTGAAACGGGACAAGGAGTTGAAATCTGAGATCATTGATTGGGGGAGACCGGCCCGTGACGTA
ACGGGCCGGTCCAAAGAGCGACCTAATGCCGGGGCAGAGAACGAGGAAAGCGACTGGCGGAGAACTAACCGGGCCGAGAGGGCTCGGTCCCGACCCCTGCTCGGT
ATCGGTTCCCTTATCATCGAGTTTGGTGTGTGCGAGAAGAAGAGCCGGAGGGTCGAAATCCACGTATCAACAATTGGCGCCGTTTGTGGGGAACGATACAGTAAA
GCGAGCTGTGTCGAAGTGAAATCTCGATCTGAGGTGAAATTTCGATCCGAGGCGTGTAGAGTACAGCGGCTGACAATTTAG
Protein sequenceShow/hide protein sequence
MVEFMVVEAKSAYKVIFGRPIIHNLKVVPSTLHQMMKYPTPKGVGIIRGEQKTSRECYAVALKPTCNTITRGLNLKETGSIDERGRRELAEDLELVPLLSLEKHG
SSSTKLGLICLSSDSKLTWASDCPTCSCRFLTIRIDFVCMTSVMENKNDLKRDKELKSEIIDWGRPARDVTGRSKERPNAGAENEESDWRRTNRAERARSRPLLG
IGSLIIEFGVCEKKSRRVEIHVSTIGAVCGERYSKASCVEVKSRSEVKFRSEACRVQRLTI