; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Moc11g25740 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc11g25740
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionRibonuclease H
Genome locationchr11:18816031..18822901
RNA-Seq ExpressionMoc11g25740
SyntenyMoc11g25740
Gene Ontology termsGO:0090502 - RNA phosphodiester bond hydrolysis, endonucleolytic (biological process)
GO:0003676 - nucleic acid binding (molecular function)
GO:0004523 - RNA-DNA hybrid ribonuclease activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022158042.1 uncharacterized protein LOC111024621 [Momordica charantia]3.5e-0876.19Show/hide
Query:  RAVDGSGEICSSPDQLPNPATFDRGEMAEELESIPFTSDERR
        RAVDG GEICSSPDQLP+P  FDRGE  +E+ESIP TSD+RR
Subjt:  RAVDGSGEICSSPDQLPNPATFDRGEMAEELESIPFTSDERR
XP_022159204.1 uncharacterized protein LOC111025623 [Momordica charantia]5.2e-0485.29Show/hide
Query:  RYIQVTNILILSDSQLIVSQVKEEFQTREPQMAR
        RYI V NILILSDSQLIVSQVKEEFQ REP+MA+
Subjt:  RYIQVTNILILSDSQLIVSQVKEEFQTREPQMAR
TrEMBL top hitse value%identityAlignment
A0A6J1DVC6 Ribonuclease H7.3e-0440Show/hide
Query:  PSEETIQAKNRDEAQIRGRAVDGS--------GEICSSPD----QLPNPATFDRGEMAEELESIPFTSDERRYIQVTNILILSDSQLIVSQVKEEFQTRE
        P   +I+ +  +E Q+    VDGS        G +  SPD    +      F       E E++       RY+ V NILILSDSQLIV QVKEEFQ RE
Subjt:  PSEETIQAKNRDEAQIRGRAVDGS--------GEICSSPD----QLPNPATFDRGEMAEELESIPFTSDERRYIQVTNILILSDSQLIVSQVKEEFQTRE

Query:  PQMAR
        P+MA+
Subjt:  PQMAR
A0A6J1DW49 uncharacterized protein LOC1110246211.7e-0876.19Show/hide
Query:  RAVDGSGEICSSPDQLPNPATFDRGEMAEELESIPFTSDERR
        RAVDG GEICSSPDQLP+P  FDRGE  +E+ESIP TSD+RR
Subjt:  RAVDGSGEICSSPDQLPNPATFDRGEMAEELESIPFTSDERR
A0A6J1E1Q5 uncharacterized protein LOC1110256232.5e-0485.29Show/hide
Query:  RYIQVTNILILSDSQLIVSQVKEEFQTREPQMAR
        RYI V NILILSDSQLIVSQVKEEFQ REP+MA+
Subjt:  RYIQVTNILILSDSQLIVSQVKEEFQTREPQMAR
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTAGAAGATTGGGCTACATCAGAAAGGACAACCAGGATCATCAACAAACAGAGTCGGACCAAGACATCAAGAAGGGGAATCGGGTCCATTGACAAGCAGAGCCGGCA
CAGGGCACGGAGGCCGACCCACCAAGAGGACGACCCCACTTCGACGCCGACCCCTTTGGCCCTCGGCGCTCTCTTCTTCCCTCCCAGTCCTTGTTTCAAGCGTATGATGT
TCTGGCCCCAAAGTCAAGCTCCTGTACCCTTTCCTCTATCGACGCTGCAAGTATTTGGTCCCGAAATATTCAAGTTGGTGCGTGGAGCGGAGAGAACCGGTCTACCAGAA
TTCCAGCATCAACATTTGGTGCCGTCTGAGGAAACGATACAAGCCAAGAATCGAGACGAAGCCCAAATCCGAGGAAGGGCAGTCGACGGCTCGGGAGAGATATGTTCGAG
CCCTGATCAGCTACCAAATCCGGCCACCTTCGACAGGGGAGAGATGGCAGAAGAGCTGGAATCCATCCCCTTTACATCCGATGAACGACGGTATATCCAAGTCACGAACA
TATTAATACTTAGTGATTCACAGTTGATTGTGAGTCAGGTGAAAGAGGAATTCCAAACCAGAGAACCACAGATGGCGAGGTGCTACAACAAGCACGATCCCGAGACCCAA
GAGGATAGCGAGGAAGATCCGGTGCTGGTGTTCGAGGGGAATTCACTAAAGAAACGTTCTTCAAAGGGGGCTTTGTGCGTAAATGTCTACACTGGTGAAGAAACTCAAGA
AGGGACAGACCAAGAAGCAAGACAGAAAAAGGCTCAGCATGGTCAAAACAAAGGCAGGCAAATAAGTTTTGAGAGTGGGAGCAACTGTTATGTAAGGAGCAATATGGTAG
AAGATTGGGCTGCATCAGGAAGGATAATCGGGACCATCGACAAACAGAGTCAAACCAAGACATCAAGAAGAGCAATCGGGTCCATTGACAAACAGAGCCGGCCCAAGGCA
CGGAGGTCTGCCCACCAAGGGGCCGACCCCACCTTGGCGCCGATGCCTTCGGCCCTCAGCGCTCTCCTCTTCCCTCTTGGTCCTTGTTTCAAGCGTATGACATTCTGGTC
CTAA
mRNA sequenceShow/hide mRNA sequence
ATGGTAGAAGATTGGGCTACATCAGAAAGGACAACCAGGATCATCAACAAACAGAGTCGGACCAAGACATCAAGAAGGGGAATCGGGTCCATTGACAAGCAGAGCCGGCA
CAGGGCACGGAGGCCGACCCACCAAGAGGACGACCCCACTTCGACGCCGACCCCTTTGGCCCTCGGCGCTCTCTTCTTCCCTCCCAGTCCTTGTTTCAAGCGTATGATGT
TCTGGCCCCAAAGTCAAGCTCCTGTACCCTTTCCTCTATCGACGCTGCAAGTATTTGGTCCCGAAATATTCAAGTTGGTGCGTGGAGCGGAGAGAACCGGTCTACCAGAA
TTCCAGCATCAACATTTGGTGCCGTCTGAGGAAACGATACAAGCCAAGAATCGAGACGAAGCCCAAATCCGAGGAAGGGCAGTCGACGGCTCGGGAGAGATATGTTCGAG
CCCTGATCAGCTACCAAATCCGGCCACCTTCGACAGGGGAGAGATGGCAGAAGAGCTGGAATCCATCCCCTTTACATCCGATGAACGACGGTATATCCAAGTCACGAACA
TATTAATACTTAGTGATTCACAGTTGATTGTGAGTCAGGTGAAAGAGGAATTCCAAACCAGAGAACCACAGATGGCGAGGTGCTACAACAAGCACGATCCCGAGACCCAA
GAGGATAGCGAGGAAGATCCGGTGCTGGTGTTCGAGGGGAATTCACTAAAGAAACGTTCTTCAAAGGGGGCTTTGTGCGTAAATGTCTACACTGGTGAAGAAACTCAAGA
AGGGACAGACCAAGAAGCAAGACAGAAAAAGGCTCAGCATGGTCAAAACAAAGGCAGGCAAATAAGTTTTGAGAGTGGGAGCAACTGTTATGTAAGGAGCAATATGGTAG
AAGATTGGGCTGCATCAGGAAGGATAATCGGGACCATCGACAAACAGAGTCAAACCAAGACATCAAGAAGAGCAATCGGGTCCATTGACAAACAGAGCCGGCCCAAGGCA
CGGAGGTCTGCCCACCAAGGGGCCGACCCCACCTTGGCGCCGATGCCTTCGGCCCTCAGCGCTCTCCTCTTCCCTCTTGGTCCTTGTTTCAAGCGTATGACATTCTGGTC
CTAA
Protein sequenceShow/hide protein sequence
MVEDWATSERTTRIINKQSRTKTSRRGIGSIDKQSRHRARRPTHQEDDPTSTPTPLALGALFFPPSPCFKRMMFWPQSQAPVPFPLSTLQVFGPEIFKLVRGAERTGLPE
FQHQHLVPSEETIQAKNRDEAQIRGRAVDGSGEICSSPDQLPNPATFDRGEMAEELESIPFTSDERRYIQVTNILILSDSQLIVSQVKEEFQTREPQMARCYNKHDPETQ
EDSEEDPVLVFEGNSLKKRSSKGALCVNVYTGEETQEGTDQEARQKKAQHGQNKGRQISFESGSNCYVRSNMVEDWAASGRIIGTIDKQSQTKTSRRAIGSIDKQSRPKA
RRSAHQGADPTLAPMPSALSALLFPLGPCFKRMTFWS