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Moc11g25840 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc11g25840
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionNuclear antigen LANA-1
Genome locationchr11:18926002..18926549
RNA-Seq ExpressionMoc11g25840
SyntenyMoc11g25840
Gene Ontology termsGO:0016020 - membrane (cellular component)
GO:0005488 - binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
AIU39518.1 nuclear antigen LANA-1 [Equid gammaherpesvirus 2]2.8e-0761.76Show/hide
Query:  KPKVEVQVKIGRKP---LGCD-GLGPDPGLGPDPGLGPDPGLGPDPGLGPDPWLGPDPWHGPRPSSGP
        KPK +   K G  P    G D G GPDPG GPDPG GPDPG GPDPG GPDP  GPDP  GP P  GP
Subjt:  KPKVEVQVKIGRKP---LGCD-GLGPDPGLGPDPGLGPDPGLGPDPGLGPDPWLGPDPWHGPRPSSGP

GCC46945.1 hypothetical protein [Chiloscyllium punctatum]1.3e-0756.52Show/hide
Query:  PKVEVQVKIGRKP-LGCD-GLGPDPGLGPDPGLGPDPGLGPDPGLGPDPWLGPDPWHGPRPSSGPSSSI
        P VE    +   P LG D GLGPDPG+G DPG+G DPG+G DPGLGPDP +G DP  GP P  GP   +
Subjt:  PKVEVQVKIGRKP-LGCD-GLGPDPGLGPDPGLGPDPGLGPDPGLGPDPWLGPDPWHGPRPSSGPSSSI

KAF6727836.1 SPT2-like protein [Oryzias melastigma]9.0e-0663.04Show/hide
Query:  GLGPDPGLGPDPGLGPDPGLGPDPGLGPDPWLGPDPWHGPRPSSGP
        G+GP PG+GP PG+GP PG+GP PG+GP P +GP P  GPRP  GP
Subjt:  GLGPDPGLGPDPGLGPDPGLGPDPGLGPDPWLGPDPWHGPRPSSGP

XP_024137383.1 protein SPT2 homolog [Oryzias melastigma]6.9e-0663.04Show/hide
Query:  GLGPDPGLGPDPGLGPDPGLGPDPGLGPDPWLGPDPWHGPRPSSGP
        G+GP PG+GP PG+GP PG+GP PG+GP P +GP P  GPRP  GP
Subjt:  GLGPDPGLGPDPGLGPDPGLGPDPGLGPDPWLGPDPWHGPRPSSGP

YP_009118179.1 nuclear antigen LANA-1 [Equid gammaherpesvirus 2]8.1e-0773.91Show/hide
Query:  GLGPDPGLGPDPGLGPDPGLGPDPGLGPDPWLGPDPWHGPRPSSGP
        G GPDPG GPDPG GPDPG GPDPG GPDP  GPDP  GP P  GP
Subjt:  GLGPDPGLGPDPGLGPDPGLGPDPGLGPDPWLGPDPWHGPRPSSGP

TrEMBL top hitse value%identityAlignment
A0A0B4Q5L6 Nuclear antigen LANA-11.4e-0761.76Show/hide
Query:  KPKVEVQVKIGRKP---LGCD-GLGPDPGLGPDPGLGPDPGLGPDPGLGPDPWLGPDPWHGPRPSSGP
        KPK +   K G  P    G D G GPDPG GPDPG GPDPG GPDPG GPDP  GPDP  GP P  GP
Subjt:  KPKVEVQVKIGRKP---LGCD-GLGPDPGLGPDPGLGPDPGLGPDPGLGPDPWLGPDPWHGPRPSSGP

A0A0B5GR27 Nuclear antigen LANA-13.9e-0773.91Show/hide
Query:  GLGPDPGLGPDPGLGPDPGLGPDPGLGPDPWLGPDPWHGPRPSSGP
        G GPDPG GPDPG GPDPG GPDPG GPDP  GPDP  GP P  GP
Subjt:  GLGPDPGLGPDPGLGPDPGLGPDPGLGPDPWLGPDPWHGPRPSSGP

A0A3B3CHD1 Protein SPT2 homolog3.3e-0663.04Show/hide
Query:  GLGPDPGLGPDPGLGPDPGLGPDPGLGPDPWLGPDPWHGPRPSSGP
        G+GP PG+GP PG+GP PG+GP PG+GP P +GP P  GPRP  GP
Subjt:  GLGPDPGLGPDPGLGPDPGLGPDPGLGPDPWLGPDPWHGPRPSSGP

A0A3B3U8N3 Uncharacterized protein3.3e-0670.45Show/hide
Query:  GPDPGLGPDPGLGPDPGLGPDPGLGPDPWLGPDPWHGPRPSSGP
        GPDPG GPDP  GPDPG GPDPG GPD   GPDP +GP P +GP
Subjt:  GPDPGLGPDPGLGPDPGLGPDPGLGPDPWLGPDPWHGPRPSSGP

A0A401TWB1 Uncharacterized protein (Fragment)6.1e-0856.52Show/hide
Query:  PKVEVQVKIGRKP-LGCD-GLGPDPGLGPDPGLGPDPGLGPDPGLGPDPWLGPDPWHGPRPSSGPSSSI
        P VE    +   P LG D GLGPDPG+G DPG+G DPG+G DPGLGPDP +G DP  GP P  GP   +
Subjt:  PKVEVQVKIGRKP-LGCD-GLGPDPGLGPDPGLGPDPGLGPDPGLGPDPWLGPDPWHGPRPSSGPSSSI

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCAAGAGATTGTATATCTTTGGGAATGTTTGACTTTATCTTTTAAGAACATTGAGAAGCATGGAACTGATAAGCACTATCCGTACCTGTTAGCAAACAGGTCT
TCTGCTAGTTGCAGGGATATCCTAACAACAGAATCACCTTTCTACCGTATGTTAGCAATATTTCGCCAAGCAAGCTCTACTCCAAGAGTGCTCCATATGTCTCTC
TCAATTTTACTTTATGTTATGCAATGGAAACCGAAAGTCGAGGTACAGGTGAAGATTGGAAGGAAGCCACTGGGCTGCGATGGGCTCGGTCCCGACCCGGGGCTC
GGTCCCGACCCGGGGCTCGGTCCCGACCCGGGGCTCGGTCCCGACCCGGGGCTCGGTCCCGACCCGTGGCTCGGCCCCGACCCGTGGCACGGCCCACGGCCCTCC
AGCGGCCCTTCATCTTCGATCCACGGTTTCGCCCAGGCCCGCCAACGAAATTAG
mRNA sequenceShow/hide mRNA sequence
ATGCAAGAGATTGTATATCTTTGGGAATGTTTGACTTTATCTTTTAAGAACATTGAGAAGCATGGAACTGATAAGCACTATCCGTACCTGTTAGCAAACAGGTCT
TCTGCTAGTTGCAGGGATATCCTAACAACAGAATCACCTTTCTACCGTATGTTAGCAATATTTCGCCAAGCAAGCTCTACTCCAAGAGTGCTCCATATGTCTCTC
TCAATTTTACTTTATGTTATGCAATGGAAACCGAAAGTCGAGGTACAGGTGAAGATTGGAAGGAAGCCACTGGGCTGCGATGGGCTCGGTCCCGACCCGGGGCTC
GGTCCCGACCCGGGGCTCGGTCCCGACCCGGGGCTCGGTCCCGACCCGGGGCTCGGTCCCGACCCGTGGCTCGGCCCCGACCCGTGGCACGGCCCACGGCCCTCC
AGCGGCCCTTCATCTTCGATCCACGGTTTCGCCCAGGCCCGCCAACGAAATTAG
Protein sequenceShow/hide protein sequence
MQEIVYLWECLTLSFKNIEKHGTDKHYPYLLANRSSASCRDILTTESPFYRMLAIFRQASSTPRVLHMSLSILLYVMQWKPKVEVQVKIGRKPLGCDGLGPDPGL
GPDPGLGPDPGLGPDPGLGPDPWLGPDPWHGPRPSSGPSSSIHGFAQARQRN