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Moc11g26190 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc11g26190
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionLINE-1 retrotransposable element ORF2 protein
Genome locationchr11:19275633..19276526
RNA-Seq ExpressionMoc11g26190
SyntenyMoc11g26190
Gene Ontology termsGO:0110165 - cellular anatomical structure (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
CAN77052.1 hypothetical protein VITISV_002154 [Vitis vinifera]7.7e-2436.36Show/hide
Query:  FGRLQIIP-KRAFYIKGNLGI------GKGVRRLARYFSA------QKFTQEEEALWRRVIESLYGTEPHGWLTKKPKGRAIGKPWFEIAKHSIIFLKFL
        F  L ++P KR   ++ NL        G GVR LA    A       +F  E E LW++VI   YG E  GW T+  +GR     W  I K  +     L
Subjt:  FGRLQIIP-KRAFYIKGNLGI------GKGVRRLARYFSA------QKFTQEEEALWRRVIESLYGTEPHGWLTKKPKGRAIGKPWFEIAKHSIIFLKFL

Query:  SFKVNHGNRVRFWLDRWTGNSTLAQEFPDIFAVSIKKEATVSDGWNDEPL--VWDLGIRRSLLDREIDSWVVLMSKLDVIRL-GEGIDKVVWSLDSSRGF
        +F+V +G RVRFW D+W G+  L + FP +F +S  K+A VS+ WN + +   W     R+L D EI+     M K+   R+  E  DK+VW+   S  F
Subjt:  SFKVNHGNRVRFWLDRWTGNSTLAQEFPDIFAVSIKKEATVSDGWNDEPL--VWDLGIRRSLLDREIDSWVVLMSKLDVIRL-GEGIDKVVWSLDSSRGF

Query:  TVKSVLNIM
        +VKS+ +IM
Subjt:  TVKSVLNIM

RVW92361.1 LINE-1 retrotransposable element ORF2 protein [Vitis vinifera]1.0e-2337.91Show/hide
Query:  GKGVRRLARYFSA------QKFTQEEEALWRRVIESLYGTEPHGWLTKKPKGRAIGKPWFEIAKHSIIFLKFLSFKVNHGNRVRFWLDRWTGNSTLAQEF
        G GVR LA    A       +F  E E LW++VI   YG E  GW T+  +GR     W  I K  +     L+F+V +G RVRFW D+W G+  L + F
Subjt:  GKGVRRLARYFSA------QKFTQEEEALWRRVIESLYGTEPHGWLTKKPKGRAIGKPWFEIAKHSIIFLKFLSFKVNHGNRVRFWLDRWTGNSTLAQEF

Query:  PDIFAVSIKKEATVSDGWNDEPL--VWDLGIRRSLLDREIDSWVVLMSKLDVIRL-GEGIDKVVWSLDSSRGFTVKSVLNIM
        P +FA+S  K+A VS+ WN + +   W+    R+L D EI+     M K+   R+  E  DK+VW+   S  F+VKS+ +I+
Subjt:  PDIFAVSIKKEATVSDGWNDEPL--VWDLGIRRSLLDREIDSWVVLMSKLDVIRL-GEGIDKVVWSLDSSRGFTVKSVLNIM

RVX19776.1 putative ribonuclease H protein [Vitis vinifera]7.7e-2436.36Show/hide
Query:  FGRLQIIP-KRAFYIKGNLGI------GKGVRRLARYFSA------QKFTQEEEALWRRVIESLYGTEPHGWLTKKPKGRAIGKPWFEIAKHSIIFLKFL
        F  L ++P KR   ++ NL        G GVR LA    A       +F  E E LW++VI   YG E  GW T+  +GR     W  I K  +     L
Subjt:  FGRLQIIP-KRAFYIKGNLGI------GKGVRRLARYFSA------QKFTQEEEALWRRVIESLYGTEPHGWLTKKPKGRAIGKPWFEIAKHSIIFLKFL

Query:  SFKVNHGNRVRFWLDRWTGNSTLAQEFPDIFAVSIKKEATVSDGWNDEPL--VWDLGIRRSLLDREIDSWVVLMSKLDVIRL-GEGIDKVVWSLDSSRGF
        +F+V +G RVRFW D+W G+  L + FP +F +S  K+A VS+ WN + +   W     R+L D EI+     M K+   R+  E  DK+VW+   S  F
Subjt:  SFKVNHGNRVRFWLDRWTGNSTLAQEFPDIFAVSIKKEATVSDGWNDEPL--VWDLGIRRSLLDREIDSWVVLMSKLDVIRL-GEGIDKVVWSLDSSRGF

Query:  TVKSVLNIM
        +VKS+ +IM
Subjt:  TVKSVLNIM

XP_022149391.1 uncharacterized protein LOC111017819 [Momordica charantia]2.2e-3144.83Show/hide
Query:  KFTQEEEALWRRVIESLYGTEPHGWLTKKPKGRAIGKPWFEIAKHSIIFLKFLSFKVNHGNRVRFWLDRWTGNSTLAQEFPDIFAVSIKKEATVSDGWND
        +F+QE EALWR+VI S+YG +PHGWL K  KG+                          G+R+RFWLD+W G +TLA++FPD++A+S+KKEA V+D W++
Subjt:  KFTQEEEALWRRVIESLYGTEPHGWLTKKPKGRAIGKPWFEIAKHSIIFLKFLSFKVNHGNRVRFWLDRWTGNSTLAQEFPDIFAVSIKKEATVSDGWND

Query:  EPLVWDLGIRRSLLDREIDSWVVLMSKLDVIRLGEGIDKVVWSLD
            WDLG RR L DRE++ W  ++ +L+V  L E  D VVW L+
Subjt:  EPLVWDLGIRRSLLDREIDSWVVLMSKLDVIRLGEGIDKVVWSLD

XP_022158566.1 uncharacterized protein LOC111025019 [Momordica charantia]8.2e-3451.45Show/hide
Query:  GNLGIG----KGVRRLARYFSAQKFTQEEEALWRRVIESLYGTEPHGWLTKKPKGRAIGKPWFEIAKHSIIFLKFLSFKVNHGNRVRFWLDRWTGNSTLA
        G LGIG    K    L ++     FT+EE ALWRRVI S+YG + +GWLTK PKG+A G+PWF+IAK+   F + + FK N G+R+ FW+D+W GN  L 
Subjt:  GNLGIG----KGVRRLARYFSAQKFTQEEEALWRRVIESLYGTEPHGWLTKKPKGRAIGKPWFEIAKHSIIFLKFLSFKVNHGNRVRFWLDRWTGNSTLA

Query:  QEFPDIFAVSIKKEATVSDGWNDEPLVWDLGIRRSLLD
         EFPD+FA+S+K+ A V D WN+E   WDL +RR L D
Subjt:  QEFPDIFAVSIKKEATVSDGWNDEPLVWDLGIRRSLLD

TrEMBL top hitse value%identityAlignment
A0A438JCR4 Putative ribonuclease H protein4.9e-2441.11Show/hide
Query:  GNLGIGKGVRR---LARYFSAQKFTQEEEALWRRVIESLYGTEPHGWLTKKPKGRAIGKPWFEIAKHSIIFLKFLSFKVNHGNRVRFWLDRWTGNSTLAQ
        G LG GK   R   L R +   +F +E   LW +VI S+YGT P+GW        +   PW  IA+    F  F+   V +G R+RFW D W GN TL  
Subjt:  GNLGIGKGVRR---LARYFSAQKFTQEEEALWRRVIESLYGTEPHGWLTKKPKGRAIGKPWFEIAKHSIIFLKFLSFKVNHGNRVRFWLDRWTGNSTLAQ

Query:  EFPDIFAVSIKKEATVSDG-WNDEPLVWDLGIRRSLLDREIDSWVVLMSKLDVIRLG-EGIDKVVWSLDSSRGFTVKSVL
        +F D++ V   K  TVS+   N  PL W+   RR+L D EID    LMS L+ + L     D  VWSL SS  F+VKS L
Subjt:  EFPDIFAVSIKKEATVSDG-WNDEPLVWDLGIRRSLLDREIDSWVVLMSKLDVIRLG-EGIDKVVWSLDSSRGFTVKSVL

A0A438KEX9 Putative ribonuclease H protein3.7e-2436.36Show/hide
Query:  FGRLQIIP-KRAFYIKGNLGI------GKGVRRLARYFSA------QKFTQEEEALWRRVIESLYGTEPHGWLTKKPKGRAIGKPWFEIAKHSIIFLKFL
        F  L ++P KR   ++ NL        G GVR LA    A       +F  E E LW++VI   YG E  GW T+  +GR     W  I K  +     L
Subjt:  FGRLQIIP-KRAFYIKGNLGI------GKGVRRLARYFSA------QKFTQEEEALWRRVIESLYGTEPHGWLTKKPKGRAIGKPWFEIAKHSIIFLKFL

Query:  SFKVNHGNRVRFWLDRWTGNSTLAQEFPDIFAVSIKKEATVSDGWNDEPL--VWDLGIRRSLLDREIDSWVVLMSKLDVIRL-GEGIDKVVWSLDSSRGF
        +F+V +G RVRFW D+W G+  L + FP +F +S  K+A VS+ WN + +   W     R+L D EI+     M K+   R+  E  DK+VW+   S  F
Subjt:  SFKVNHGNRVRFWLDRWTGNSTLAQEFPDIFAVSIKKEATVSDGWNDEPL--VWDLGIRRSLLDREIDSWVVLMSKLDVIRL-GEGIDKVVWSLDSSRGF

Query:  TVKSVLNIM
        +VKS+ +IM
Subjt:  TVKSVLNIM

A0A6J1D884 uncharacterized protein LOC1110178191.1e-3144.83Show/hide
Query:  KFTQEEEALWRRVIESLYGTEPHGWLTKKPKGRAIGKPWFEIAKHSIIFLKFLSFKVNHGNRVRFWLDRWTGNSTLAQEFPDIFAVSIKKEATVSDGWND
        +F+QE EALWR+VI S+YG +PHGWL K  KG+                          G+R+RFWLD+W G +TLA++FPD++A+S+KKEA V+D W++
Subjt:  KFTQEEEALWRRVIESLYGTEPHGWLTKKPKGRAIGKPWFEIAKHSIIFLKFLSFKVNHGNRVRFWLDRWTGNSTLAQEFPDIFAVSIKKEATVSDGWND

Query:  EPLVWDLGIRRSLLDREIDSWVVLMSKLDVIRLGEGIDKVVWSLD
            WDLG RR L DRE++ W  ++ +L+V  L E  D VVW L+
Subjt:  EPLVWDLGIRRSLLDREIDSWVVLMSKLDVIRLGEGIDKVVWSLD

A0A6J1E196 uncharacterized protein LOC1110250194.0e-3451.45Show/hide
Query:  GNLGIG----KGVRRLARYFSAQKFTQEEEALWRRVIESLYGTEPHGWLTKKPKGRAIGKPWFEIAKHSIIFLKFLSFKVNHGNRVRFWLDRWTGNSTLA
        G LGIG    K    L ++     FT+EE ALWRRVI S+YG + +GWLTK PKG+A G+PWF+IAK+   F + + FK N G+R+ FW+D+W GN  L 
Subjt:  GNLGIG----KGVRRLARYFSAQKFTQEEEALWRRVIESLYGTEPHGWLTKKPKGRAIGKPWFEIAKHSIIFLKFLSFKVNHGNRVRFWLDRWTGNSTLA

Query:  QEFPDIFAVSIKKEATVSDGWNDEPLVWDLGIRRSLLD
         EFPD+FA+S+K+ A V D WN+E   WDL +RR L D
Subjt:  QEFPDIFAVSIKKEATVSDGWNDEPLVWDLGIRRSLLD

A5BMA8 Uncharacterized protein3.7e-2436.36Show/hide
Query:  FGRLQIIP-KRAFYIKGNLGI------GKGVRRLARYFSA------QKFTQEEEALWRRVIESLYGTEPHGWLTKKPKGRAIGKPWFEIAKHSIIFLKFL
        F  L ++P KR   ++ NL        G GVR LA    A       +F  E E LW++VI   YG E  GW T+  +GR     W  I K  +     L
Subjt:  FGRLQIIP-KRAFYIKGNLGI------GKGVRRLARYFSA------QKFTQEEEALWRRVIESLYGTEPHGWLTKKPKGRAIGKPWFEIAKHSIIFLKFL

Query:  SFKVNHGNRVRFWLDRWTGNSTLAQEFPDIFAVSIKKEATVSDGWNDEPL--VWDLGIRRSLLDREIDSWVVLMSKLDVIRL-GEGIDKVVWSLDSSRGF
        +F+V +G RVRFW D+W G+  L + FP +F +S  K+A VS+ WN + +   W     R+L D EI+     M K+   R+  E  DK+VW+   S  F
Subjt:  SFKVNHGNRVRFWLDRWTGNSTLAQEFPDIFAVSIKKEATVSDGWNDEPL--VWDLGIRRSLLDREIDSWVVLMSKLDVIRL-GEGIDKVVWSLDSSRGF

Query:  TVKSVLNIM
        +VKS+ +IM
Subjt:  TVKSVLNIM

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAAGACACGTGGCAGAGCTTTGGAAGGCTTCAAATCATACCAAAACGTGCGTTTTACATTAAGGGCAATCTCGGGATTGGGAAAGGCGTCAGGCGCCTAGCTCGATA
TTTTTCTGCACAAAAGTTTACACAGGAGGAAGAAGCCCTTTGGAGAAGAGTGATAGAAAGTCTTTATGGGACTGAACCCCACGGGTGGCTGACCAAAAAGCCCAAAGGAA
GAGCAATTGGCAAACCTTGGTTTGAAATAGCAAAACACAGCATCATTTTCCTCAAGTTTCTCTCTTTTAAAGTTAATCATGGTAACAGAGTTCGCTTTTGGTTGGATAGG
TGGACAGGGAATTCCACGCTTGCTCAAGAGTTCCCGGATATTTTTGCTGTGTCGATAAAGAAGGAGGCTACAGTTTCTGATGGCTGGAATGATGAACCACTTGTATGGGA
CCTTGGCATAAGAAGGAGTCTTCTTGACAGAGAGATTGACAGCTGGGTTGTTCTTATGAGCAAATTGGATGTTATTCGACTGGGAGAAGGGATTGACAAGGTGGTTTGGT
CTCTTGATTCTTCCAGAGGTTTTACAGTTAAGTCGGTCCTAAATATCATGTGTGAAGATGCTCTTACTCTGAACCCGCCCTTAATCTCCCTTCTATAG
mRNA sequenceShow/hide mRNA sequence
ATGGAAGACACGTGGCAGAGCTTTGGAAGGCTTCAAATCATACCAAAACGTGCGTTTTACATTAAGGGCAATCTCGGGATTGGGAAAGGCGTCAGGCGCCTAGCTCGATA
TTTTTCTGCACAAAAGTTTACACAGGAGGAAGAAGCCCTTTGGAGAAGAGTGATAGAAAGTCTTTATGGGACTGAACCCCACGGGTGGCTGACCAAAAAGCCCAAAGGAA
GAGCAATTGGCAAACCTTGGTTTGAAATAGCAAAACACAGCATCATTTTCCTCAAGTTTCTCTCTTTTAAAGTTAATCATGGTAACAGAGTTCGCTTTTGGTTGGATAGG
TGGACAGGGAATTCCACGCTTGCTCAAGAGTTCCCGGATATTTTTGCTGTGTCGATAAAGAAGGAGGCTACAGTTTCTGATGGCTGGAATGATGAACCACTTGTATGGGA
CCTTGGCATAAGAAGGAGTCTTCTTGACAGAGAGATTGACAGCTGGGTTGTTCTTATGAGCAAATTGGATGTTATTCGACTGGGAGAAGGGATTGACAAGGTGGTTTGGT
CTCTTGATTCTTCCAGAGGTTTTACAGTTAAGTCGGTCCTAAATATCATGTGTGAAGATGCTCTTACTCTGAACCCGCCCTTAATCTCCCTTCTATAG
Protein sequenceShow/hide protein sequence
MEDTWQSFGRLQIIPKRAFYIKGNLGIGKGVRRLARYFSAQKFTQEEEALWRRVIESLYGTEPHGWLTKKPKGRAIGKPWFEIAKHSIIFLKFLSFKVNHGNRVRFWLDR
WTGNSTLAQEFPDIFAVSIKKEATVSDGWNDEPLVWDLGIRRSLLDREIDSWVVLMSKLDVIRLGEGIDKVVWSLDSSRGFTVKSVLNIMCEDALTLNPPLISLL