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Moc11g26800 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc11g26800
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionReverse transcriptase
Genome locationchr11:19706926..19709223
RNA-Seq ExpressionMoc11g26800
SyntenyMoc11g26800
Gene Ontology termsGO:0016740 - transferase activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
CAB4308921.1 unnamed protein product [Prunus armeniaca]2.8e-0644.93Show/hide
Query:  GWSDDMEKVE--VIDQMNARLLASFYKLEIERALNLMHPTKTSGPNGFPMGFYLKFWKTVGDNTISYCL
        G+ D +E V+  V  +MNARLL  F + E+E+AL  M PTK+S  +G    FY K+W+ VGD+  ++CL
Subjt:  GWSDDMEKVE--VIDQMNARLLASFYKLEIERALNLMHPTKTSGPNGFPMGFYLKFWKTVGDNTISYCL

KAA3467258.1 reverse transcriptase [Gossypium australe]8.1e-0645.61Show/hide
Query:  VIDQMNARLLASFYKLEIERALNLMHPTKTSGPNGFPMGFYLKFWKTVGDNTISYCL
        + D MN  L A++ K EI+ AL  M PTK S P+GFP  F+ K+W  +G++T  +CL
Subjt:  VIDQMNARLLASFYKLEIERALNLMHPTKTSGPNGFPMGFYLKFWKTVGDNTISYCL

OMO59710.1 reverse transcriptase [Corchorus capsularis]1.1e-0533.64Show/hide
Query:  RQKNEIKWLEFEEDGWSDDMEKVE-----------------------------VIDQMNARLLASFYKLEIERALNLMHPTKTSGPNGFPMGFYLKFWKT
        R+KN I+ LE E    SDD  +++                             +  +MN  LLA F   EI  AL  +HPTK  GP+G P+ F+ KFW  
Subjt:  RQKNEIKWLEFEEDGWSDDMEKVE-----------------------------VIDQMNARLLASFYKLEIERALNLMHPTKTSGPNGFPMGFYLKFWKT

Query:  VGDNTISYCL
        VG +  S+CL
Subjt:  VGDNTISYCL

VVA24596.1 PREDICTED: reverse mRNAase [Prunus dulcis]3.3e-0744.93Show/hide
Query:  GWSDDMEKVEVI--DQMNARLLASFYKLEIERALNLMHPTKTSGPNGFPMGFYLKFWKTVGDNTISYCL
        G+ D +E V+++   +MNARLL  F + E+E+AL  M PTK+ G +G P  FY K+W+ VGD+    CL
Subjt:  GWSDDMEKVEVI--DQMNARLLASFYKLEIERALNLMHPTKTSGPNGFPMGFYLKFWKTVGDNTISYCL

XP_021754445.1 uncharacterized protein LOC110719774 [Chenopodium quinoa]5.6e-0745.95Show/hide
Query:  EDGWSD-----DMEKVEVIDQMNARLLASFYKLEIERALNLMHPTKTSGPNGFPMGFYLKFWKTVGDNTISYCL
        EDG +D     D  +  V D+MNA L  +F + E+  AL  MHPTK   P+G P  FY KFW  VGD+ +SY L
Subjt:  EDGWSD-----DMEKVEVIDQMNARLLASFYKLEIERALNLMHPTKTSGPNGFPMGFYLKFWKTVGDNTISYCL

TrEMBL top hitse value%identityAlignment
A0A1R3GNW3 Reverse transcriptase5.1e-0633.64Show/hide
Query:  RQKNEIKWLEFEEDGWSDDMEKVE-----------------------------VIDQMNARLLASFYKLEIERALNLMHPTKTSGPNGFPMGFYLKFWKT
        R+KN I+ LE E    SDD  +++                             +  +MN  LLA F   EI  AL  +HPTK  GP+G P+ F+ KFW  
Subjt:  RQKNEIKWLEFEEDGWSDDMEKVE-----------------------------VIDQMNARLLASFYKLEIERALNLMHPTKTSGPNGFPMGFYLKFWKT

Query:  VGDNTISYCL
        VG +  S+CL
Subjt:  VGDNTISYCL

A0A5B6VDL5 Reverse transcriptase3.9e-0645.61Show/hide
Query:  VIDQMNARLLASFYKLEIERALNLMHPTKTSGPNGFPMGFYLKFWKTVGDNTISYCL
        + D MN  L A++ K EI+ AL  M PTK S P+GFP  F+ K+W  +G++T  +CL
Subjt:  VIDQMNARLLASFYKLEIERALNLMHPTKTSGPNGFPMGFYLKFWKTVGDNTISYCL

A0A5B6VH65 Reverse transcriptase5.1e-0641.1Show/hide
Query:  VIDQMNARLLASFYKLEIERALNLMHPTKTSGPNGFPMGFYLKFWKTVGDNTISYCLKKRYVSSYGQILVGYF
        + D MN  +  SF + +I  A+N + PTK SG +GFP  FY KFW  VG +T  +CL   Y +S    + G F
Subjt:  VIDQMNARLLASFYKLEIERALNLMHPTKTSGPNGFPMGFYLKFWKTVGDNTISYCLKKRYVSSYGQILVGYF

A0A5E4F9P9 PREDICTED: reverse mRNAase1.6e-0744.93Show/hide
Query:  GWSDDMEKVEVI--DQMNARLLASFYKLEIERALNLMHPTKTSGPNGFPMGFYLKFWKTVGDNTISYCL
        G+ D +E V+++   +MNARLL  F + E+E+AL  M PTK+ G +G P  FY K+W+ VGD+    CL
Subjt:  GWSDDMEKVEVI--DQMNARLLASFYKLEIERALNLMHPTKTSGPNGFPMGFYLKFWKTVGDNTISYCL

A0A6J5X7Q9 Uncharacterized protein1.3e-0644.93Show/hide
Query:  GWSDDMEKVE--VIDQMNARLLASFYKLEIERALNLMHPTKTSGPNGFPMGFYLKFWKTVGDNTISYCL
        G+ D +E V+  V  +MNARLL  F + E+E+AL  M PTK+S  +G    FY K+W+ VGD+  ++CL
Subjt:  GWSDDMEKVE--VIDQMNARLLASFYKLEIERALNLMHPTKTSGPNGFPMGFYLKFWKTVGDNTISYCL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATTCGGCTTGGGGCTTGGGAGGAGACCTCAATGAAACTTTGTGGGAAGATGAAAAAGAGGGAGGTTCTAGCAATAGTTCGTCTACAATTGACCTTTTTCATG
AGACAGAAGAATGAGATTAAATGGCTTGAATTTGAAGAGGATGGATGGTCTGACGATATGGAGAAGGTTGAAGTGATAGATCAAATGAATGCTAGATTGTTAGCT
TCTTTCTACAAGCTTGAGATTGAGCGGGCTTTGAATCTGATGCATCCTACCAAGACTTCAGGCCCAAATGGTTTTCCAATGGGTTTTTACCTTAAATTTTGGAAG
ACTGTTGGTGACAATACTATAAGTTATTGCCTTAAGAAGAGATATGTCTCGAGCTATGGCCAGATTTTGGTGGGGTACTTCAGATACGAGAAAACGTATCAACTG
GATTAG
mRNA sequenceShow/hide mRNA sequence
ATGATTCGGCTTGGGGCTTGGGAGGAGACCTCAATGAAACTTTGTGGGAAGATGAAAAAGAGGGAGGTTCTAGCAATAGTTCGTCTACAATTGACCTTTTTCATG
AGACAGAAGAATGAGATTAAATGGCTTGAATTTGAAGAGGATGGATGGTCTGACGATATGGAGAAGGTTGAAGTGATAGATCAAATGAATGCTAGATTGTTAGCT
TCTTTCTACAAGCTTGAGATTGAGCGGGCTTTGAATCTGATGCATCCTACCAAGACTTCAGGCCCAAATGGTTTTCCAATGGGTTTTTACCTTAAATTTTGGAAG
ACTGTTGGTGACAATACTATAAGTTATTGCCTTAAGAAGAGATATGTCTCGAGCTATGGCCAGATTTTGGTGGGGTACTTCAGATACGAGAAAACGTATCAACTG
GATTAG
Protein sequenceShow/hide protein sequence
MIRLGAWEETSMKLCGKMKKREVLAIVRLQLTFFMRQKNEIKWLEFEEDGWSDDMEKVEVIDQMNARLLASFYKLEIERALNLMHPTKTSGPNGFPMGFYLKFWK
TVGDNTISYCLKKRYVSSYGQILVGYFRYEKTYQLD