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Moc11g26840 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc11g26840
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionRibonuclease H
Genome locationchr11:19726616..19728150
RNA-Seq ExpressionMoc11g26840
SyntenyMoc11g26840
Gene Ontology termsGO:0015074 - DNA integration (biological process)
GO:0090502 - RNA phosphodiester bond hydrolysis, endonucleolytic (biological process)
GO:0030430 - host cell cytoplasm (cellular component)
GO:0003676 - nucleic acid binding (molecular function)
GO:0004523 - RNA-DNA hybrid ribonuclease activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022143565.1 uncharacterized protein LOC111013434 [Momordica charantia]3.0e-2267.9Show/hide
Query:  LKKYLSKVLAQLAQFNCYGIDQIPRSENSNADALAKLASAYETDLAKWIPFEILDTPFFLEEDMMEIDLQPPSWMDPIKEY
        ++KYL KV + LA F  Y I QIPRS+NSN+DALAKLASAYETDLA+ +P EILD P  LE DMMEID  PPSWM+PIK++
Subjt:  LKKYLSKVLAQLAQFNCYGIDQIPRSENSNADALAKLASAYETDLAKWIPFEILDTPFFLEEDMMEIDLQPPSWMDPIKEY

XP_022150100.1 uncharacterized protein LOC111018362 [Momordica charantia]1.7e-2267.9Show/hide
Query:  LKKYLSKVLAQLAQFNCYGIDQIPRSENSNADALAKLASAYETDLAKWIPFEILDTPFFLEEDMMEIDLQPPSWMDPIKEY
        ++KYLSKV + LAQF  Y + Q+PRSENSNADALAKLASAYETDLA+ +P EILD+P  LE D+ME+D   PSWMDPI E+
Subjt:  LKKYLSKVLAQLAQFNCYGIDQIPRSENSNADALAKLASAYETDLAKWIPFEILDTPFFLEEDMMEIDLQPPSWMDPIKEY

XP_022151715.1 uncharacterized protein LOC111019628 [Momordica charantia]3.9e-2266.67Show/hide
Query:  LKKYLSKVLAQLAQFNCYGIDQIPRSENSNADALAKLASAYETDLAKWIPFEILDTPFFLEEDMMEIDLQPPSWMDPIKEY
        ++KYLS+V + LAQF  Y + Q+PRSENSNADALAKLASAYETDLA+ +P EILD P  L+ D+MEID+  PSWMDPI E+
Subjt:  LKKYLSKVLAQLAQFNCYGIDQIPRSENSNADALAKLASAYETDLAKWIPFEILDTPFFLEEDMMEIDLQPPSWMDPIKEY

XP_022153142.1 uncharacterized protein LOC111020710 [Momordica charantia]1.9e-2166.67Show/hide
Query:  LKKYLSKVLAQLAQFNCYGIDQIPRSENSNADALAKLASAYETDLAKWIPFEILDTPFFLEEDMMEIDLQPPSWMDPIKEY
        ++KYLSKV + LAQF  Y + Q+PRSENSNADALAKLASAYETDLA+ +P EILDTP  LE D+ME+D    +WMDPI E+
Subjt:  LKKYLSKVLAQLAQFNCYGIDQIPRSENSNADALAKLASAYETDLAKWIPFEILDTPFFLEEDMMEIDLQPPSWMDPIKEY

XP_022159396.1 uncharacterized protein LOC111025810 [Momordica charantia]3.0e-2266.67Show/hide
Query:  LKKYLSKVLAQLAQFNCYGIDQIPRSENSNADALAKLASAYETDLAKWIPFEILDTPFFLEEDMMEIDLQPPSWMDPIKEY
        ++KYLSKV + +AQF  Y + Q+PRSENSNADALAKLASAYETDLA+ +P EILD P  LE D+ME+D   PSWMDPI E+
Subjt:  LKKYLSKVLAQLAQFNCYGIDQIPRSENSNADALAKLASAYETDLAKWIPFEILDTPFFLEEDMMEIDLQPPSWMDPIKEY

TrEMBL top hitse value%identityAlignment
A0A6J1CP53 Ribonuclease H1.4e-2267.9Show/hide
Query:  LKKYLSKVLAQLAQFNCYGIDQIPRSENSNADALAKLASAYETDLAKWIPFEILDTPFFLEEDMMEIDLQPPSWMDPIKEY
        ++KYL KV + LA F  Y I QIPRS+NSN+DALAKLASAYETDLA+ +P EILD P  LE DMMEID  PPSWM+PIK++
Subjt:  LKKYLSKVLAQLAQFNCYGIDQIPRSENSNADALAKLASAYETDLAKWIPFEILDTPFFLEEDMMEIDLQPPSWMDPIKEY

A0A6J1D7J6 Ribonuclease H8.5e-2367.9Show/hide
Query:  LKKYLSKVLAQLAQFNCYGIDQIPRSENSNADALAKLASAYETDLAKWIPFEILDTPFFLEEDMMEIDLQPPSWMDPIKEY
        ++KYLSKV + LAQF  Y + Q+PRSENSNADALAKLASAYETDLA+ +P EILD+P  LE D+ME+D   PSWMDPI E+
Subjt:  LKKYLSKVLAQLAQFNCYGIDQIPRSENSNADALAKLASAYETDLAKWIPFEILDTPFFLEEDMMEIDLQPPSWMDPIKEY

A0A6J1DBZ0 uncharacterized protein LOC1110196281.9e-2266.67Show/hide
Query:  LKKYLSKVLAQLAQFNCYGIDQIPRSENSNADALAKLASAYETDLAKWIPFEILDTPFFLEEDMMEIDLQPPSWMDPIKEY
        ++KYLS+V + LAQF  Y + Q+PRSENSNADALAKLASAYETDLA+ +P EILD P  L+ D+MEID+  PSWMDPI E+
Subjt:  LKKYLSKVLAQLAQFNCYGIDQIPRSENSNADALAKLASAYETDLAKWIPFEILDTPFFLEEDMMEIDLQPPSWMDPIKEY

A0A6J1DI47 Ribonuclease H9.4e-2266.67Show/hide
Query:  LKKYLSKVLAQLAQFNCYGIDQIPRSENSNADALAKLASAYETDLAKWIPFEILDTPFFLEEDMMEIDLQPPSWMDPIKEY
        ++KYLSKV + LAQF  Y + Q+PRSENSNADALAKLASAYETDLA+ +P EILDTP  LE D+ME+D    +WMDPI E+
Subjt:  LKKYLSKVLAQLAQFNCYGIDQIPRSENSNADALAKLASAYETDLAKWIPFEILDTPFFLEEDMMEIDLQPPSWMDPIKEY

A0A6J1E3S9 uncharacterized protein LOC1110258101.1e-2267.9Show/hide
Query:  LKKYLSKVLAQLAQFNCYGIDQIPRSENSNADALAKLASAYETDLAKWIPFEILDTPFFLEEDMMEIDLQPPSWMDPIKEY
        ++KYLSKV + LAQF  Y + Q+PRSENSNADALAKLASAYETDLA+ +P EILD P  LE D+ME+D   PSWMDPI E+
Subjt:  LKKYLSKVLAQLAQFNCYGIDQIPRSENSNADALAKLASAYETDLAKWIPFEILDTPFFLEEDMMEIDLQPPSWMDPIKEY

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCTGACCTGATCTCCGACACTGGTATCGCATTCTATCTCGAACTTGATATTGAGTCCGAACTGGTTACTGACTTGAGCGTCGAAGAGTTCGCCCTCTTGTGTAGGTC
ATCTCTAAGTGAGACGAGTCAGCTATCCCCACGTGTTCGACCTCCTCTAGGCGAAGGACTCCACTTGAAGAAGTACCTTAGCAAGGTCCTCGCACAACTCGCACAATTCA
ATTGCTACGGCATCGATCAAATACCCAGGTCCGAGAACTCTAATGCAGATGCCTTAGCCAAGTTGGCCTCCGCGTACGAGACTGACCTGGCCAAGTGGATCCCATTTGAA
ATTCTAGACACACCTTTCTTTTTGGAGGAAGATATGATGGAGATTGATCTTCAACCCCCATCTTGGATGGATCCGATTAAGGAGTACCCTCTCAGGCAGCACTTCTGTGG
ATTCGAAAGAAGCCAATAA
mRNA sequenceShow/hide mRNA sequence
ATGTCTGACCTGATCTCCGACACTGGTATCGCATTCTATCTCGAACTTGATATTGAGTCCGAACTGGTTACTGACTTGAGCGTCGAAGAGTTCGCCCTCTTGTGTAGGTC
ATCTCTAAGTGAGACGAGTCAGCTATCCCCACGTGTTCGACCTCCTCTAGGCGAAGGACTCCACTTGAAGAAGTACCTTAGCAAGGTCCTCGCACAACTCGCACAATTCA
ATTGCTACGGCATCGATCAAATACCCAGGTCCGAGAACTCTAATGCAGATGCCTTAGCCAAGTTGGCCTCCGCGTACGAGACTGACCTGGCCAAGTGGATCCCATTTGAA
ATTCTAGACACACCTTTCTTTTTGGAGGAAGATATGATGGAGATTGATCTTCAACCCCCATCTTGGATGGATCCGATTAAGGAGTACCCTCTCAGGCAGCACTTCTGTGG
ATTCGAAAGAAGCCAATAA
Protein sequenceShow/hide protein sequence
MSDLISDTGIAFYLELDIESELVTDLSVEEFALLCRSSLSETSQLSPRVRPPLGEGLHLKKYLSKVLAQLAQFNCYGIDQIPRSENSNADALAKLASAYETDLAKWIPFE
ILDTPFFLEEDMMEIDLQPPSWMDPIKEYPLRQHFCGFERSQ