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Moc11g27140 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc11g27140
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionCCHC-type domain-containing protein
Genome locationchr11:19882092..19882634
RNA-Seq ExpressionMoc11g27140
SyntenyMoc11g27140
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022149484.1 uncharacterized protein LOC111017902 [Momordica charantia]8.7e-2738.79Show/hide
Query:  MEDLVDLWKNLTLTGDENEAVCVAKGYPLLTAENVCRCAMGKWLSSRSVNSEAFRTVMKS-------------------------SGESRILNTGPWSFD
        M+++ DLW++   T DENE V + +G P+LTA+NV  C + K  +S+ +++EA R+VMKS                         S +SR+L++GPW+F+
Subjt:  MEDLVDLWKNLTLTGDENEAVCVAKGYPLLTAENVCRCAMGKWLSSRSVNSEAFRTVMKS-------------------------SGESRILNTGPWSFD

Query:  KGLIVLVSPRAEDQLSDLHFMETSFWVQIHNVPFSCLTKEMAVKFGGSLGLVEDADSGSYGSWLG
        K L+VL SP A +Q  D++F   +FW+QIHN+PF C++ EMA   G  LG VE+ +      W G
Subjt:  KGLIVLVSPRAEDQLSDLHFMETSFWVQIHNVPFSCLTKEMAVKFGGSLGLVEDADSGSYGSWLG

XP_022155933.1 uncharacterized protein LOC111022932 [Momordica charantia]9.0e-2436.97Show/hide
Query:  MEDLVDLWKNLTLTGDENEAVCVAKGYPLLTAENVCRCAMGKWLSSRSVNSEAFRTVMKS-------------------------SGESRILNTGPWSFD
        M+++ +LW+N TLT ++ E + +    PL+T ENV R A+GK  +S+ ++ EAFR+VMKS                         + ++R+L +GPWSF+
Subjt:  MEDLVDLWKNLTLTGDENEAVCVAKGYPLLTAENVCRCAMGKWLSSRSVNSEAFRTVMKS-------------------------SGESRILNTGPWSFD

Query:  KGLIVLVSPRAEDQLSDLHFMETSFWVQIHNVPFSCLTKEMAVKFGGSLGLVEDADSGSYGSWLG
          L+VL SP A DQ  D++F   + W+QIH +PF C+ K+MA   G  +G VE+ D      W G
Subjt:  KGLIVLVSPRAEDQLSDLHFMETSFWVQIHNVPFSCLTKEMAVKFGGSLGLVEDADSGSYGSWLG

XP_022156711.1 uncharacterized protein LOC111023555 [Momordica charantia]4.6e-2033.54Show/hide
Query:  MEDLVDLWKNLTLTGDENEAVCVAKGYPLLTAENVCRCAMGKWLSSRSVNSEAFRTVMKS-------------------------SGESRILNTGPWSFD
        M+D+  LW+N TL  +E + + +    P+LT +N+  CA+GK   S+ +  EAF +VMK                          + + R+ + GPW+FD
Subjt:  MEDLVDLWKNLTLTGDENEAVCVAKGYPLLTAENVCRCAMGKWLSSRSVNSEAFRTVMKS-------------------------SGESRILNTGPWSFD

Query:  KGLIVLVSPRAEDQLSDLHFMETSFWVQIHNVPFSCLTKEMAVKFGGSLGLVEDADSGSYGSWL
        K L++LV   A ++  D+     +FWVQIH + F C+TK+MA   G  LG VE+ D  S   W+
Subjt:  KGLIVLVSPRAEDQLSDLHFMETSFWVQIHNVPFSCLTKEMAVKFGGSLGLVEDADSGSYGSWL

XP_022158119.1 uncharacterized protein LOC111024676, partial [Momordica charantia]1.7e-2238.46Show/hide
Query:  MEDLVDLWKNLTLTGDENEAVCVAKGYPLLTAENVCRCAMGKWLSSRSVNSEAFRTVMK------------SSG-------------ESRILNTGPWSFD
        M+++ +LW+N  LT +E E   V    P+LTAEN+  C +GK  +S+ ++++A  +VMK            ++G             + R+L++GPW+FD
Subjt:  MEDLVDLWKNLTLTGDENEAVCVAKGYPLLTAENVCRCAMGKWLSSRSVNSEAFRTVMK------------SSG-------------ESRILNTGPWSFD

Query:  KGLIVLVSPRAEDQLSDLHFMETSFWVQIHNVPFSCLTKEMAVKFGGSLGLVEDAD
        K L VLVSP A D+  D+ F   +FWVQIH +PF  LT++MA   G  LG VE+ D
Subjt:  KGLIVLVSPRAEDQLSDLHFMETSFWVQIHNVPFSCLTKEMAVKFGGSLGLVEDAD

XP_022158861.1 uncharacterized protein LOC111025324 [Momordica charantia]2.6e-2347.37Show/hide
Query:  MEDLVDLWKNLTLTGDENEAVCVAKGYPLLTAENVCRCAMGKWLSSRSVNSEAFRTVMKSSGESRILNTGPWSFDKGLIVLVSPRAEDQLSDLHFMETSF
        M +LVDLWK L L+ ++NE V V     LL+A++V  CA+ K L +R ++++AFR VMKS           W FDK L++LVS  A D+ SDL F   SF
Subjt:  MEDLVDLWKNLTLTGDENEAVCVAKGYPLLTAENVCRCAMGKWLSSRSVNSEAFRTVMKSSGESRILNTGPWSFDKGLIVLVSPRAEDQLSDLHFMETSF

Query:  WVQIHNVPFSCLTKEMAVKFGGSLGLVEDADSG
        WV+IHNVPF  +T+E+AV+    LG VE  D G
Subjt:  WVQIHNVPFSCLTKEMAVKFGGSLGLVEDADSG

TrEMBL top hitse value%identityAlignment
A0A6J1D765 uncharacterized protein LOC1110179024.2e-2738.79Show/hide
Query:  MEDLVDLWKNLTLTGDENEAVCVAKGYPLLTAENVCRCAMGKWLSSRSVNSEAFRTVMKS-------------------------SGESRILNTGPWSFD
        M+++ DLW++   T DENE V + +G P+LTA+NV  C + K  +S+ +++EA R+VMKS                         S +SR+L++GPW+F+
Subjt:  MEDLVDLWKNLTLTGDENEAVCVAKGYPLLTAENVCRCAMGKWLSSRSVNSEAFRTVMKS-------------------------SGESRILNTGPWSFD

Query:  KGLIVLVSPRAEDQLSDLHFMETSFWVQIHNVPFSCLTKEMAVKFGGSLGLVEDADSGSYGSWLG
        K L+VL SP A +Q  D++F   +FW+QIHN+PF C++ EMA   G  LG VE+ +      W G
Subjt:  KGLIVLVSPRAEDQLSDLHFMETSFWVQIHNVPFSCLTKEMAVKFGGSLGLVEDADSGSYGSWLG

A0A6J1DP89 uncharacterized protein LOC1110229324.4e-2436.97Show/hide
Query:  MEDLVDLWKNLTLTGDENEAVCVAKGYPLLTAENVCRCAMGKWLSSRSVNSEAFRTVMKS-------------------------SGESRILNTGPWSFD
        M+++ +LW+N TLT ++ E + +    PL+T ENV R A+GK  +S+ ++ EAFR+VMKS                         + ++R+L +GPWSF+
Subjt:  MEDLVDLWKNLTLTGDENEAVCVAKGYPLLTAENVCRCAMGKWLSSRSVNSEAFRTVMKS-------------------------SGESRILNTGPWSFD

Query:  KGLIVLVSPRAEDQLSDLHFMETSFWVQIHNVPFSCLTKEMAVKFGGSLGLVEDADSGSYGSWLG
          L+VL SP A DQ  D++F   + W+QIH +PF C+ K+MA   G  +G VE+ D      W G
Subjt:  KGLIVLVSPRAEDQLSDLHFMETSFWVQIHNVPFSCLTKEMAVKFGGSLGLVEDADSGSYGSWLG

A0A6J1DVS4 uncharacterized protein LOC1110235552.2e-2033.54Show/hide
Query:  MEDLVDLWKNLTLTGDENEAVCVAKGYPLLTAENVCRCAMGKWLSSRSVNSEAFRTVMKS-------------------------SGESRILNTGPWSFD
        M+D+  LW+N TL  +E + + +    P+LT +N+  CA+GK   S+ +  EAF +VMK                          + + R+ + GPW+FD
Subjt:  MEDLVDLWKNLTLTGDENEAVCVAKGYPLLTAENVCRCAMGKWLSSRSVNSEAFRTVMKS-------------------------SGESRILNTGPWSFD

Query:  KGLIVLVSPRAEDQLSDLHFMETSFWVQIHNVPFSCLTKEMAVKFGGSLGLVEDADSGSYGSWL
        K L++LV   A ++  D+     +FWVQIH + F C+TK+MA   G  LG VE+ D  S   W+
Subjt:  KGLIVLVSPRAEDQLSDLHFMETSFWVQIHNVPFSCLTKEMAVKFGGSLGLVEDADSGSYGSWL

A0A6J1DYG3 uncharacterized protein LOC1110246768.2e-2338.46Show/hide
Query:  MEDLVDLWKNLTLTGDENEAVCVAKGYPLLTAENVCRCAMGKWLSSRSVNSEAFRTVMK------------SSG-------------ESRILNTGPWSFD
        M+++ +LW+N  LT +E E   V    P+LTAEN+  C +GK  +S+ ++++A  +VMK            ++G             + R+L++GPW+FD
Subjt:  MEDLVDLWKNLTLTGDENEAVCVAKGYPLLTAENVCRCAMGKWLSSRSVNSEAFRTVMK------------SSG-------------ESRILNTGPWSFD

Query:  KGLIVLVSPRAEDQLSDLHFMETSFWVQIHNVPFSCLTKEMAVKFGGSLGLVEDAD
        K L VLVSP A D+  D+ F   +FWVQIH +PF  LT++MA   G  LG VE+ D
Subjt:  KGLIVLVSPRAEDQLSDLHFMETSFWVQIHNVPFSCLTKEMAVKFGGSLGLVEDAD

A0A6J1E271 uncharacterized protein LOC1110253241.3e-2347.37Show/hide
Query:  MEDLVDLWKNLTLTGDENEAVCVAKGYPLLTAENVCRCAMGKWLSSRSVNSEAFRTVMKSSGESRILNTGPWSFDKGLIVLVSPRAEDQLSDLHFMETSF
        M +LVDLWK L L+ ++NE V V     LL+A++V  CA+ K L +R ++++AFR VMKS           W FDK L++LVS  A D+ SDL F   SF
Subjt:  MEDLVDLWKNLTLTGDENEAVCVAKGYPLLTAENVCRCAMGKWLSSRSVNSEAFRTVMKSSGESRILNTGPWSFDKGLIVLVSPRAEDQLSDLHFMETSF

Query:  WVQIHNVPFSCLTKEMAVKFGGSLGLVEDADSG
        WV+IHNVPF  +T+E+AV+    LG VE  D G
Subjt:  WVQIHNVPFSCLTKEMAVKFGGSLGLVEDADSG

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGGACTTGGTTGATTTATGGAAGAATTTAACACTAACAGGGGATGAGAATGAGGCTGTTTGTGTGGCTAAAGGGTATCCTTTACTAACAGCAGAAAATGTTTGTCG
TTGTGCGATGGGGAAATGGTTGTCCAGCCGTAGTGTGAATTCTGAAGCTTTTAGGACTGTCATGAAATCTAGCGGAGAAAGTAGAATATTGAATACTGGACCCTGGTCCT
TTGATAAGGGGCTCATTGTCCTCGTGTCCCCTCGTGCTGAGGATCAGCTTTCAGATTTGCATTTTATGGAAACTTCCTTCTGGGTTCAGATTCATAATGTCCCTTTCTCT
TGTCTGACAAAGGAGATGGCTGTGAAGTTCGGTGGCTCTTTGGGACTGGTTGAGGATGCTGACAGTGGGAGTTATGGTTCGTGGCTTGGGGCATTATCGAGTTCGAGTAC
GAATTGA
mRNA sequenceShow/hide mRNA sequence
ATGGAGGACTTGGTTGATTTATGGAAGAATTTAACACTAACAGGGGATGAGAATGAGGCTGTTTGTGTGGCTAAAGGGTATCCTTTACTAACAGCAGAAAATGTTTGTCG
TTGTGCGATGGGGAAATGGTTGTCCAGCCGTAGTGTGAATTCTGAAGCTTTTAGGACTGTCATGAAATCTAGCGGAGAAAGTAGAATATTGAATACTGGACCCTGGTCCT
TTGATAAGGGGCTCATTGTCCTCGTGTCCCCTCGTGCTGAGGATCAGCTTTCAGATTTGCATTTTATGGAAACTTCCTTCTGGGTTCAGATTCATAATGTCCCTTTCTCT
TGTCTGACAAAGGAGATGGCTGTGAAGTTCGGTGGCTCTTTGGGACTGGTTGAGGATGCTGACAGTGGGAGTTATGGTTCGTGGCTTGGGGCATTATCGAGTTCGAGTAC
GAATTGA
Protein sequenceShow/hide protein sequence
MEDLVDLWKNLTLTGDENEAVCVAKGYPLLTAENVCRCAMGKWLSSRSVNSEAFRTVMKSSGESRILNTGPWSFDKGLIVLVSPRAEDQLSDLHFMETSFWVQIHNVPFS
CLTKEMAVKFGGSLGLVEDADSGSYGSWLGALSSSSTN