; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Moc11g28190 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc11g28190
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionReverse transcriptase domain-containing protein
Genome locationchr11:20573040..20578358
RNA-Seq ExpressionMoc11g28190
SyntenyMoc11g28190
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0036886.1 zf-RVT domain-containing protein [Cucumis melo var. makuwa]1.9e-2843.06Show/hide
Query:  AGSLWVACVEAYALRGSCIWTVRPSSRFSWCWWDILGVRDSLRPLLHTVLGDGRLCSVWHDSWLPGGPIHPRCGDRIIYDAASSYMAKVADFLLPDGSWR
        +GSLWVA +EAY L+G  +W V      SWC+  IL  R+ L+  +   +G+G  C VW D WL GG I  + G+R++YDAAS   A+++DF+ P+G W 
Subjt:  AGSLWVACVEAYALRGSCIWTVRPSSRFSWCWWDILGVRDSLRPLLHTVLGDGRLCSVWHDSWLPGGPIHPRCGDRIIYDAASSYMAKVADFLLPDGSWR

Query:  WSRVSVDLLELLPEVMSVQAMVGQEDRLVWTPAVSGLFSVSSAW
        W RVS++L++L   V  V   +   D  VW P   G FS++SAW
Subjt:  WSRVSVDLLELLPEVMSVQAMVGQEDRLVWTPAVSGLFSVSSAW

KAA0042317.1 non-LTR retroelement reverse transcriptase-like protein [Cucumis melo var. makuwa]3.2e-2845.39Show/hide
Query:  SLWVACVEAYALRGSCIWTVRPSSRFSWCWWDILGVRDSLRPLLHTVLGDGRLCSVWHDSWLPGGPIHPRCGDRIIYDAASSYMAKVADFLLPDGSWRWS
        SLWVA VEAY L+   +W V      SWC   IL  RDSL+  +   +GDG  C VW D WL G PI  + G+R++YDAAS   A++++F+ PDG W+W 
Subjt:  SLWVACVEAYALRGSCIWTVRPSSRFSWCWWDILGVRDSLRPLLHTVLGDGRLCSVWHDSWLPGGPIHPRCGDRIIYDAASSYMAKVADFLLPDGSWRWS

Query:  RVSVDLLELLPEVMSVQAMVGQEDRLVWTPAVSGLFSVSSA
        RVS++L++L   V +V+  +   DR VW P   G FS++SA
Subjt:  RVSVDLLELLPEVMSVQAMVGQEDRLVWTPAVSGLFSVSSA

KAA0062318.1 uncharacterized protein E6C27_scaffold154G00690 [Cucumis melo var. makuwa]7.8e-2739.3Show/hide
Query:  AGSLWVACVEAYALRGSCIWTVRPSSRFSWCWWDILGVRDSLRPLLHTVLGDGRLCSVWHDSWLPGGPIHPRCGDRIIYDAASSYMAKVADFLLPDGSWR
        +GSLWVA VEAY L+G  +W V      SWC   IL  R+ L+ L+   +G+G    VW D WLP G I  + G+R++YDAAS   A+++DF+ PDG W 
Subjt:  AGSLWVACVEAYALRGSCIWTVRPSSRFSWCWWDILGVRDSLRPLLHTVLGDGRLCSVWHDSWLPGGPIHPRCGDRIIYDAASSYMAKVADFLLPDGSWR

Query:  WSRVSVDLLELLPEVMSVQAMVGQEDRLVWTPAVSGLFSVSSAWGIFVLVVPQFLIFPCYGLV--GISLNIRLFLGWQFVIAYLRVIVFASGMRW-----
        W RVS++L++L   V  V   +   D  VW P   G FS++SAW     V P+       GL+  G ++    F  W  +   L  I      RW     
Subjt:  WSRVSVDLLELLPEVMSVQAMVGQEDRLVWTPAVSGLFSVSSAWGIFVLVVPQFLIFPCYGLV--GISLNIRLFLGWQFVIAYLRVIVFASGMRW-----

Query:  --CLLLVFFVLVCLIGFHIGLLSLLGFVM
          C+L  F   V LIG  IG LS LGFV+
Subjt:  --CLLLVFFVLVCLIGFHIGLLSLLGFVM

TYJ96685.1 zf-RVT domain-containing protein [Cucumis melo var. makuwa]1.9e-2843.06Show/hide
Query:  AGSLWVACVEAYALRGSCIWTVRPSSRFSWCWWDILGVRDSLRPLLHTVLGDGRLCSVWHDSWLPGGPIHPRCGDRIIYDAASSYMAKVADFLLPDGSWR
        +GSLWVA +EAY L+G  +W V      SWC+  IL  R+ L+  +   +G+G  C VW D WL GG I  + G+R++YDAAS   A+++DF+ P+G W 
Subjt:  AGSLWVACVEAYALRGSCIWTVRPSSRFSWCWWDILGVRDSLRPLLHTVLGDGRLCSVWHDSWLPGGPIHPRCGDRIIYDAASSYMAKVADFLLPDGSWR

Query:  WSRVSVDLLELLPEVMSVQAMVGQEDRLVWTPAVSGLFSVSSAW
        W RVS++L++L   V  V   +   D  VW P   G FS++SAW
Subjt:  WSRVSVDLLELLPEVMSVQAMVGQEDRLVWTPAVSGLFSVSSAW

XP_022158861.1 uncharacterized protein LOC111025324 [Momordica charantia]3.0e-4285.42Show/hide
Query:  GDGRLCSVWHDSWLPGGPIHPRCGDRIIYDAASSYMAKVADFLLPDGSWRWSRVSVDLLELLPEVMSVQAMVGQEDRLVWTPAVSGLFSVSSAWGI
        GDGRLC VWHD WL GGPIHPRCGDR+IYD ASS MAKV DFLLPDGSWRW RVSVDLLELLPEVMSV+ +VG+EDR VWTPAVSGLFSVSS WGI
Subjt:  GDGRLCSVWHDSWLPGGPIHPRCGDRIIYDAASSYMAKVADFLLPDGSWRWSRVSVDLLELLPEVMSVQAMVGQEDRLVWTPAVSGLFSVSSAWGI

TrEMBL top hitse value%identityAlignment
A0A5A7T440 Zf-RVT domain-containing protein9.0e-2943.06Show/hide
Query:  AGSLWVACVEAYALRGSCIWTVRPSSRFSWCWWDILGVRDSLRPLLHTVLGDGRLCSVWHDSWLPGGPIHPRCGDRIIYDAASSYMAKVADFLLPDGSWR
        +GSLWVA +EAY L+G  +W V      SWC+  IL  R+ L+  +   +G+G  C VW D WL GG I  + G+R++YDAAS   A+++DF+ P+G W 
Subjt:  AGSLWVACVEAYALRGSCIWTVRPSSRFSWCWWDILGVRDSLRPLLHTVLGDGRLCSVWHDSWLPGGPIHPRCGDRIIYDAASSYMAKVADFLLPDGSWR

Query:  WSRVSVDLLELLPEVMSVQAMVGQEDRLVWTPAVSGLFSVSSAW
        W RVS++L++L   V  V   +   D  VW P   G FS++SAW
Subjt:  WSRVSVDLLELLPEVMSVQAMVGQEDRLVWTPAVSGLFSVSSAW

A0A5A7TKU4 Non-LTR retroelement reverse transcriptase-like protein1.5e-2845.39Show/hide
Query:  SLWVACVEAYALRGSCIWTVRPSSRFSWCWWDILGVRDSLRPLLHTVLGDGRLCSVWHDSWLPGGPIHPRCGDRIIYDAASSYMAKVADFLLPDGSWRWS
        SLWVA VEAY L+   +W V      SWC   IL  RDSL+  +   +GDG  C VW D WL G PI  + G+R++YDAAS   A++++F+ PDG W+W 
Subjt:  SLWVACVEAYALRGSCIWTVRPSSRFSWCWWDILGVRDSLRPLLHTVLGDGRLCSVWHDSWLPGGPIHPRCGDRIIYDAASSYMAKVADFLLPDGSWRWS

Query:  RVSVDLLELLPEVMSVQAMVGQEDRLVWTPAVSGLFSVSSA
        RVS++L++L   V +V+  +   DR VW P   G FS++SA
Subjt:  RVSVDLLELLPEVMSVQAMVGQEDRLVWTPAVSGLFSVSSA

A0A5A7V3Z0 Reverse transcriptase domain-containing protein3.8e-2739.3Show/hide
Query:  AGSLWVACVEAYALRGSCIWTVRPSSRFSWCWWDILGVRDSLRPLLHTVLGDGRLCSVWHDSWLPGGPIHPRCGDRIIYDAASSYMAKVADFLLPDGSWR
        +GSLWVA VEAY L+G  +W V      SWC   IL  R+ L+ L+   +G+G    VW D WLP G I  + G+R++YDAAS   A+++DF+ PDG W 
Subjt:  AGSLWVACVEAYALRGSCIWTVRPSSRFSWCWWDILGVRDSLRPLLHTVLGDGRLCSVWHDSWLPGGPIHPRCGDRIIYDAASSYMAKVADFLLPDGSWR

Query:  WSRVSVDLLELLPEVMSVQAMVGQEDRLVWTPAVSGLFSVSSAWGIFVLVVPQFLIFPCYGLV--GISLNIRLFLGWQFVIAYLRVIVFASGMRW-----
        W RVS++L++L   V  V   +   D  VW P   G FS++SAW     V P+       GL+  G ++    F  W  +   L  I      RW     
Subjt:  WSRVSVDLLELLPEVMSVQAMVGQEDRLVWTPAVSGLFSVSSAWGIFVLVVPQFLIFPCYGLV--GISLNIRLFLGWQFVIAYLRVIVFASGMRW-----

Query:  --CLLLVFFVLVCLIGFHIGLLSLLGFVM
          C+L  F   V LIG  IG LS LGFV+
Subjt:  --CLLLVFFVLVCLIGFHIGLLSLLGFVM

A0A5D3BDZ6 Zf-RVT domain-containing protein9.0e-2943.06Show/hide
Query:  AGSLWVACVEAYALRGSCIWTVRPSSRFSWCWWDILGVRDSLRPLLHTVLGDGRLCSVWHDSWLPGGPIHPRCGDRIIYDAASSYMAKVADFLLPDGSWR
        +GSLWVA +EAY L+G  +W V      SWC+  IL  R+ L+  +   +G+G  C VW D WL GG I  + G+R++YDAAS   A+++DF+ P+G W 
Subjt:  AGSLWVACVEAYALRGSCIWTVRPSSRFSWCWWDILGVRDSLRPLLHTVLGDGRLCSVWHDSWLPGGPIHPRCGDRIIYDAASSYMAKVADFLLPDGSWR

Query:  WSRVSVDLLELLPEVMSVQAMVGQEDRLVWTPAVSGLFSVSSAW
        W RVS++L++L   V  V   +   D  VW P   G FS++SAW
Subjt:  WSRVSVDLLELLPEVMSVQAMVGQEDRLVWTPAVSGLFSVSSAW

A0A6J1E271 uncharacterized protein LOC1110253241.4e-4285.42Show/hide
Query:  GDGRLCSVWHDSWLPGGPIHPRCGDRIIYDAASSYMAKVADFLLPDGSWRWSRVSVDLLELLPEVMSVQAMVGQEDRLVWTPAVSGLFSVSSAWGI
        GDGRLC VWHD WL GGPIHPRCGDR+IYD ASS MAKV DFLLPDGSWRW RVSVDLLELLPEVMSV+ +VG+EDR VWTPAVSGLFSVSS WGI
Subjt:  GDGRLCSVWHDSWLPGGPIHPRCGDRIIYDAASSYMAKVADFLLPDGSWRWSRVSVDLLELLPEVMSVQAMVGQEDRLVWTPAVSGLFSVSSAWGI

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCGTGCTGGGTCGTTGTGGGTCGCTTGTGTGGAGGCTTATGCTCTACGGGGTTCTTGTATTTGGACTGTCCGGCCTTCATCTCGGTTTTCCTGGTGTTGGTGGGATAT
TCTAGGTGTTCGGGATTCTCTCCGTCCTCTGCTGCATACTGTTCTTGGGGATGGTCGGCTTTGTTCTGTGTGGCACGATTCCTGGTTGCCGGGGGGTCCGATTCACCCGA
GGTGTGGGGATAGGATCATCTATGATGCTGCTAGCTCTTATATGGCTAAGGTTGCTGACTTTTTGCTTCCTGATGGTTCCTGGCGGTGGTCTCGTGTTTCGGTGGATCTT
CTTGAGCTTCTCCCGGAGGTGATGTCGGTGCAAGCCATGGTTGGTCAGGAGGATCGCCTTGTTTGGACTCCCGCGGTGTCTGGCCTTTTTTCGGTATCTAGTGCTTGGGG
AATCTTCGTCCTCGTCGTCCCCCAGTTCCTTATTTTTCCTTGTTATGGTTTAGTGGGAATATCCCTAAACATTCGTTTATTTCTTGGTTGGCAATTCGTGATCGCCTATC
TACGCGTGATCGTCTTCGCTAGTGGAATGCGTTGGTGCCTGCTACTTGTGTTTTTTGTGCTGGTTTGTCTCATCGGGTTTCATATTGGTCTACTGAGCTTACTTGGATTT
GTCATGTTAGTGCTGGGTCGTCTGCTCGGCGGCATGTGTGGCGGGTCATTAAAGCTGAGGTGTATTTTCGTTGCACTACTTGGCCAGGGAGTTGTTGTAGGAGCTCTGAG
CCCATGCTTGTCTCTGCTTGGGGCTTATTTTCGTGATTTCGATTATTCTCCTTACCTTTTGATTTGTTGCCTTGATCTCGGGCTGATCAGGGCAATGGGAAGACGATTTG
ACTTGCTAACGAAAAAAATTGACTCTATTATCTTGATGAACCTATTGGTCAGAAGAGTTTTCCAATCTCCATCACCTCACAAACTCATCATCCTTCAAGTTTATTCAAAA
AGGAACATTGAAAAGGATACGCAAGTCCAAGAGTCTGAACATATCTCTGGAATTGAAATTGACCATAAAAGAATCAGTGATGAATCAAACATTACAATATCTGCTAATGA
TGAGTCAGACCTGGATTTGCCTATTGCTTTAAGGAAGAGAAAACGAACTTGTACTTAG
mRNA sequenceShow/hide mRNA sequence
ATGCGTGCTGGGTCGTTGTGGGTCGCTTGTGTGGAGGCTTATGCTCTACGGGGTTCTTGTATTTGGACTGTCCGGCCTTCATCTCGGTTTTCCTGGTGTTGGTGGGATAT
TCTAGGTGTTCGGGATTCTCTCCGTCCTCTGCTGCATACTGTTCTTGGGGATGGTCGGCTTTGTTCTGTGTGGCACGATTCCTGGTTGCCGGGGGGTCCGATTCACCCGA
GGTGTGGGGATAGGATCATCTATGATGCTGCTAGCTCTTATATGGCTAAGGTTGCTGACTTTTTGCTTCCTGATGGTTCCTGGCGGTGGTCTCGTGTTTCGGTGGATCTT
CTTGAGCTTCTCCCGGAGGTGATGTCGGTGCAAGCCATGGTTGGTCAGGAGGATCGCCTTGTTTGGACTCCCGCGGTGTCTGGCCTTTTTTCGGTATCTAGTGCTTGGGG
AATCTTCGTCCTCGTCGTCCCCCAGTTCCTTATTTTTCCTTGTTATGGTTTAGTGGGAATATCCCTAAACATTCGTTTATTTCTTGGTTGGCAATTCGTGATCGCCTATC
TACGCGTGATCGTCTTCGCTAGTGGAATGCGTTGGTGCCTGCTACTTGTGTTTTTTGTGCTGGTTTGTCTCATCGGGTTTCATATTGGTCTACTGAGCTTACTTGGATTT
GTCATGTTAGTGCTGGGTCGTCTGCTCGGCGGCATGTGTGGCGGGTCATTAAAGCTGAGGTGTATTTTCGTTGCACTACTTGGCCAGGGAGTTGTTGTAGGAGCTCTGAG
CCCATGCTTGTCTCTGCTTGGGGCTTATTTTCGTGATTTCGATTATTCTCCTTACCTTTTGATTTGTTGCCTTGATCTCGGGCTGATCAGGGCAATGGGAAGACGATTTG
ACTTGCTAACGAAAAAAATTGACTCTATTATCTTGATGAACCTATTGGTCAGAAGAGTTTTCCAATCTCCATCACCTCACAAACTCATCATCCTTCAAGTTTATTCAAAA
AGGAACATTGAAAAGGATACGCAAGTCCAAGAGTCTGAACATATCTCTGGAATTGAAATTGACCATAAAAGAATCAGTGATGAATCAAACATTACAATATCTGCTAATGA
TGAGTCAGACCTGGATTTGCCTATTGCTTTAAGGAAGAGAAAACGAACTTGTACTTAG
Protein sequenceShow/hide protein sequence
MRAGSLWVACVEAYALRGSCIWTVRPSSRFSWCWWDILGVRDSLRPLLHTVLGDGRLCSVWHDSWLPGGPIHPRCGDRIIYDAASSYMAKVADFLLPDGSWRWSRVSVDL
LELLPEVMSVQAMVGQEDRLVWTPAVSGLFSVSSAWGIFVLVVPQFLIFPCYGLVGISLNIRLFLGWQFVIAYLRVIVFASGMRWCLLLVFFVLVCLIGFHIGLLSLLGF
VMLVLGRLLGGMCGGSLKLRCIFVALLGQGVVVGALSPCLSLLGAYFRDFDYSPYLLICCLDLGLIRAMGRRFDLLTKKIDSIILMNLLVRRVFQSPSPHKLIILQVYSK
RNIEKDTQVQESEHISGIEIDHKRISDESNITISANDESDLDLPIALRKRKRTCT