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Moc11g28730 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc11g28730
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionRetrovirus-related Pol polyprotein from transposon opus
Genome locationchr11:20940173..20940463
RNA-Seq ExpressionMoc11g28730
SyntenyMoc11g28730
Gene Ontology termsNA
InterPro domainsIPR021109 - Aspartic peptidase domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022142953.1 uncharacterized protein LOC111012947 [Momordica charantia]1.1e-2570.45Show/hide
Query:  SIKKAEGKIEDVLVKVDKLIFPVGFIILNCEADLEVPIILGRPFLATGDTVVNVRKEEITMKVNDKQVTFNVLDAMWLPDAVEECSAI
        SI K EGKIEDVLVKVDK IFP  FIIL+CEAD +VPIILGRPFLATG+T+++V+K E+TM+V+D++VTFN+LDAM  PD  EEC  I
Subjt:  SIKKAEGKIEDVLVKVDKLIFPVGFIILNCEADLEVPIILGRPFLATGDTVVNVRKEEITMKVNDKQVTFNVLDAMWLPDAVEECSAI

XP_022150097.1 uncharacterized protein LOC111018357 [Momordica charantia]3.2e-3078.41Show/hide
Query:  SIKKAEGKIEDVLVKVDKLIFPVGFIILNCEADLEVPIILGRPFLATGDTVVNVRKEEITMKVNDKQVTFNVLDAMWLPDAVEECSAI
        SI+K EGKIEDVL+KVDKL FP  FIIL+CE DL++PIILG PFLATGDT+ NVRK EITMKVND+QVTFNVLDAM LPD +EECS I
Subjt:  SIKKAEGKIEDVLVKVDKLIFPVGFIILNCEADLEVPIILGRPFLATGDTVVNVRKEEITMKVNDKQVTFNVLDAMWLPDAVEECSAI

XP_022150857.1 uncharacterized protein LOC111018901 [Momordica charantia]6.7e-2877.89Show/hide
Query:  SIKKAEGKIEDVLVKVDKLIFPVGFIILNCEADLEVPIILGRPFLATGDTVVNVRKEEITMKVNDKQVTFNVLDAMWLPDAVEECSAIGANLEEL
        SIKK EGKIEDVLVKVDK IFP  FI        EVPIILGRPFLATG TV NVRK EITMKVND+QVTFNVLDAM LPD VEECS IGA +EEL
Subjt:  SIKKAEGKIEDVLVKVDKLIFPVGFIILNCEADLEVPIILGRPFLATGDTVVNVRKEEITMKVNDKQVTFNVLDAMWLPDAVEECSAIGANLEEL

XP_022157244.1 uncharacterized protein LOC111024002 [Momordica charantia]3.5e-2980Show/hide
Query:  SIKKAEGKIEDVLVKVDKLIFPVGFIILNCEADLEVPIILGRPFLATGDTVVNVRKEEITMKVNDKQVTFNVLDAMWLPDAVEECSAIGA
        SIKK EGKIED+LVKVD+LIFP+ FIIL+CEADLEV +IL R FLAT D V NVRK EITMKVND+QVTFNVLDAM LPD VEECS IGA
Subjt:  SIKKAEGKIEDVLVKVDKLIFPVGFIILNCEADLEVPIILGRPFLATGDTVVNVRKEEITMKVNDKQVTFNVLDAMWLPDAVEECSAIGA

XP_022157836.1 uncharacterized protein LOC111024449 [Momordica charantia]4.3e-2769.23Show/hide
Query:  SIKKAEGKIEDVLVKVDKLIFPVGFIILNCEADLEVPIILGRPFLATGDTVVNVRKEEITMKVNDKQVTFNVLDAMWLPDAVEECSAIGAN
        SI K EGKIEDVLVKVDK IFP  FIILNCEAD +VPIILGRPFL+TG+T+++V+K E+TM V+D++VTFN+LDAM  PD +EEC+ I  N
Subjt:  SIKKAEGKIEDVLVKVDKLIFPVGFIILNCEADLEVPIILGRPFLATGDTVVNVRKEEITMKVNDKQVTFNVLDAMWLPDAVEECSAIGAN

TrEMBL top hitse value%identityAlignment
A0A6J1CPJ3 uncharacterized protein LOC1110129475.2e-2670.45Show/hide
Query:  SIKKAEGKIEDVLVKVDKLIFPVGFIILNCEADLEVPIILGRPFLATGDTVVNVRKEEITMKVNDKQVTFNVLDAMWLPDAVEECSAI
        SI K EGKIEDVLVKVDK IFP  FIIL+CEAD +VPIILGRPFLATG+T+++V+K E+TM+V+D++VTFN+LDAM  PD  EEC  I
Subjt:  SIKKAEGKIEDVLVKVDKLIFPVGFIILNCEADLEVPIILGRPFLATGDTVVNVRKEEITMKVNDKQVTFNVLDAMWLPDAVEECSAI

A0A6J1D9S6 uncharacterized protein LOC1110183571.6e-3078.41Show/hide
Query:  SIKKAEGKIEDVLVKVDKLIFPVGFIILNCEADLEVPIILGRPFLATGDTVVNVRKEEITMKVNDKQVTFNVLDAMWLPDAVEECSAI
        SI+K EGKIEDVL+KVDKL FP  FIIL+CE DL++PIILG PFLATGDT+ NVRK EITMKVND+QVTFNVLDAM LPD +EECS I
Subjt:  SIKKAEGKIEDVLVKVDKLIFPVGFIILNCEADLEVPIILGRPFLATGDTVVNVRKEEITMKVNDKQVTFNVLDAMWLPDAVEECSAI

A0A6J1DBX0 uncharacterized protein LOC1110189013.2e-2877.89Show/hide
Query:  SIKKAEGKIEDVLVKVDKLIFPVGFIILNCEADLEVPIILGRPFLATGDTVVNVRKEEITMKVNDKQVTFNVLDAMWLPDAVEECSAIGANLEEL
        SIKK EGKIEDVLVKVDK IFP  FI        EVPIILGRPFLATG TV NVRK EITMKVND+QVTFNVLDAM LPD VEECS IGA +EEL
Subjt:  SIKKAEGKIEDVLVKVDKLIFPVGFIILNCEADLEVPIILGRPFLATGDTVVNVRKEEITMKVNDKQVTFNVLDAMWLPDAVEECSAIGANLEEL

A0A6J1DVY2 uncharacterized protein LOC1110240021.7e-2980Show/hide
Query:  SIKKAEGKIEDVLVKVDKLIFPVGFIILNCEADLEVPIILGRPFLATGDTVVNVRKEEITMKVNDKQVTFNVLDAMWLPDAVEECSAIGA
        SIKK EGKIED+LVKVD+LIFP+ FIIL+CEADLEV +IL R FLAT D V NVRK EITMKVND+QVTFNVLDAM LPD VEECS IGA
Subjt:  SIKKAEGKIEDVLVKVDKLIFPVGFIILNCEADLEVPIILGRPFLATGDTVVNVRKEEITMKVNDKQVTFNVLDAMWLPDAVEECSAIGA

A0A6J1DZC3 uncharacterized protein LOC1110244492.1e-2769.23Show/hide
Query:  SIKKAEGKIEDVLVKVDKLIFPVGFIILNCEADLEVPIILGRPFLATGDTVVNVRKEEITMKVNDKQVTFNVLDAMWLPDAVEECSAIGAN
        SI K EGKIEDVLVKVDK IFP  FIILNCEAD +VPIILGRPFL+TG+T+++V+K E+TM V+D++VTFN+LDAM  PD +EEC+ I  N
Subjt:  SIKKAEGKIEDVLVKVDKLIFPVGFIILNCEADLEVPIILGRPFLATGDTVVNVRKEEITMKVNDKQVTFNVLDAMWLPDAVEECSAIGAN

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCCATTAAGAAAGCGGAAGGAAAAATAGAGGATGTGCTTGTTAAAGTCGATAAATTAATTTTTCCCGTCGGTTTCATAATTTTGAATTGTGAAGCAGATCTTGAGGT
GCCGATCATTCTTGGGAGGCCGTTTTTAGCAACTGGAGACACAGTAGTCAATGTTAGGAAAGAAGAGATCACTATGAAGGTCAATGATAAGCAAGTCACCTTCAACGTCC
TTGATGCGATGTGGCTCCCGGATGCAGTCGAGGAGTGCTCTGCAATAGGGGCAAATTTGGAGGAACTCTAG
mRNA sequenceShow/hide mRNA sequence
ATGTCCATTAAGAAAGCGGAAGGAAAAATAGAGGATGTGCTTGTTAAAGTCGATAAATTAATTTTTCCCGTCGGTTTCATAATTTTGAATTGTGAAGCAGATCTTGAGGT
GCCGATCATTCTTGGGAGGCCGTTTTTAGCAACTGGAGACACAGTAGTCAATGTTAGGAAAGAAGAGATCACTATGAAGGTCAATGATAAGCAAGTCACCTTCAACGTCC
TTGATGCGATGTGGCTCCCGGATGCAGTCGAGGAGTGCTCTGCAATAGGGGCAAATTTGGAGGAACTCTAG
Protein sequenceShow/hide protein sequence
MSIKKAEGKIEDVLVKVDKLIFPVGFIILNCEADLEVPIILGRPFLATGDTVVNVRKEEITMKVNDKQVTFNVLDAMWLPDAVEECSAIGANLEEL