; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Moc11g29850 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc11g29850
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
Descriptionzinc finger protein CONSTANS-LIKE 5
Genome locationchr11:21876877..21886175
RNA-Seq ExpressionMoc11g29850
SyntenyMoc11g29850
Gene Ontology termsGO:0009909 - regulation of flower development (biological process)
GO:0005634 - nucleus (cellular component)
GO:0005515 - protein binding (molecular function)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsIPR010402 - CCT domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8653155.1 hypothetical protein Csa_020132 [Cucumis sativus]1.3e-3175.76Show/hide
Query:  MSEISYPLGQ---TGVDSGLAMSGSGNQATQLCGMDREARVLRYREEKKNQKFEKTIWYTSRKAYAETRPRIKGRFAKQANMLTEVDEMYGLSGSSMCL
        +S+ISYP+GQ   TG DSGL +SGSGNQATQLCGMDREARVLRYRE++KN+KFEKTI Y SRKAYAETRPRIKGRFAK+ +ML+EVDEMYG + S + L
Subjt:  MSEISYPLGQ---TGVDSGLAMSGSGNQATQLCGMDREARVLRYREEKKNQKFEKTIWYTSRKAYAETRPRIKGRFAKQANMLTEVDEMYGLSGSSMCL

XP_008453644.1 PREDICTED: zinc finger protein CONSTANS-LIKE 5-like [Cucumis melo]7.8e-3276.77Show/hide
Query:  MSEISYPLGQ---TGVDSGLAMSGSGNQATQLCGMDREARVLRYREEKKNQKFEKTIWYTSRKAYAETRPRIKGRFAKQANMLTEVDEMYGLSGSSMCL
        MSEISYP+GQ   TG DSGL +SG GNQATQLCGMDREARVLRYRE++KN+KFEKTI Y SRKAYAETRPRIKGRFAK+ +ML+EVDE+YG + SS+ L
Subjt:  MSEISYPLGQ---TGVDSGLAMSGSGNQATQLCGMDREARVLRYREEKKNQKFEKTIWYTSRKAYAETRPRIKGRFAKQANMLTEVDEMYGLSGSSMCL

XP_011656660.1 zinc finger protein CONSTANS-LIKE 5 [Cucumis sativus]1.3e-3175.76Show/hide
Query:  MSEISYPLGQ---TGVDSGLAMSGSGNQATQLCGMDREARVLRYREEKKNQKFEKTIWYTSRKAYAETRPRIKGRFAKQANMLTEVDEMYGLSGSSMCL
        +S+ISYP+GQ   TG DSGL +SGSGNQATQLCGMDREARVLRYRE++KN+KFEKTI Y SRKAYAETRPRIKGRFAK+ +ML+EVDE+YG + SS+ L
Subjt:  MSEISYPLGQ---TGVDSGLAMSGSGNQATQLCGMDREARVLRYREEKKNQKFEKTIWYTSRKAYAETRPRIKGRFAKQANMLTEVDEMYGLSGSSMCL

XP_022134642.1 zinc finger protein CONSTANS-LIKE 5 [Momordica charantia]4.4e-3585.42Show/hide
Query:  MSEISYPLGQTGVDSGLAMSGSGNQATQLCGMDREARVLRYREEKKNQKFEKTIWYTSRKAYAETRPRIKGRFAKQANMLTEVDEMYGLSGSSMCL
        MSEISYP GQT  DSGLAMSGSGNQATQLCGMDREARVLRYRE++KN+KFEKTI Y SRKAYAETRPRIKGRFAK+ +MLTEVDEMYG  GSSM L
Subjt:  MSEISYPLGQTGVDSGLAMSGSGNQATQLCGMDREARVLRYREEKKNQKFEKTIWYTSRKAYAETRPRIKGRFAKQANMLTEVDEMYGLSGSSMCL

XP_038879797.1 zinc finger protein CONSTANS-LIKE 5-like [Benincasa hispida]7.8e-3276.77Show/hide
Query:  MSEISYPLGQT---GVDSGLAMSGSGNQATQLCGMDREARVLRYREEKKNQKFEKTIWYTSRKAYAETRPRIKGRFAKQANMLTEVDEMYGLSGSSMCL
        MS+ISYPLGQT   G DSGL +SGSGNQ TQLCGMDREARVLRYRE++KN+KFEKTI Y SRKAYAETRPRIKGRFAK+ +ML+EVDE+YG + SS+ L
Subjt:  MSEISYPLGQT---GVDSGLAMSGSGNQATQLCGMDREARVLRYREEKKNQKFEKTIWYTSRKAYAETRPRIKGRFAKQANMLTEVDEMYGLSGSSMCL

TrEMBL top hitse value%identityAlignment
A0A0A0LUG1 Zinc finger protein6.5e-3275.76Show/hide
Query:  MSEISYPLGQ---TGVDSGLAMSGSGNQATQLCGMDREARVLRYREEKKNQKFEKTIWYTSRKAYAETRPRIKGRFAKQANMLTEVDEMYGLSGSSMCL
        +S+ISYP+GQ   TG DSGL +SGSGNQATQLCGMDREARVLRYRE++KN+KFEKTI Y SRKAYAETRPRIKGRFAK+ +ML+EVDE+YG + SS+ L
Subjt:  MSEISYPLGQ---TGVDSGLAMSGSGNQATQLCGMDREARVLRYREEKKNQKFEKTIWYTSRKAYAETRPRIKGRFAKQANMLTEVDEMYGLSGSSMCL

A0A1S3BXX9 zinc finger protein CONSTANS-LIKE 5-like3.8e-3276.77Show/hide
Query:  MSEISYPLGQ---TGVDSGLAMSGSGNQATQLCGMDREARVLRYREEKKNQKFEKTIWYTSRKAYAETRPRIKGRFAKQANMLTEVDEMYGLSGSSMCL
        MSEISYP+GQ   TG DSGL +SG GNQATQLCGMDREARVLRYRE++KN+KFEKTI Y SRKAYAETRPRIKGRFAK+ +ML+EVDE+YG + SS+ L
Subjt:  MSEISYPLGQ---TGVDSGLAMSGSGNQATQLCGMDREARVLRYREEKKNQKFEKTIWYTSRKAYAETRPRIKGRFAKQANMLTEVDEMYGLSGSSMCL

A0A5A7UXW5 Zinc finger protein CONSTANS-LIKE 5-like3.8e-3276.77Show/hide
Query:  MSEISYPLGQ---TGVDSGLAMSGSGNQATQLCGMDREARVLRYREEKKNQKFEKTIWYTSRKAYAETRPRIKGRFAKQANMLTEVDEMYGLSGSSMCL
        MSEISYP+GQ   TG DSGL +SG GNQATQLCGMDREARVLRYRE++KN+KFEKTI Y SRKAYAETRPRIKGRFAK+ +ML+EVDE+YG + SS+ L
Subjt:  MSEISYPLGQ---TGVDSGLAMSGSGNQATQLCGMDREARVLRYREEKKNQKFEKTIWYTSRKAYAETRPRIKGRFAKQANMLTEVDEMYGLSGSSMCL

A0A5A7V9V4 Zinc finger protein CONSTANS-LIKE 52.5e-3176.04Show/hide
Query:  MSEISYPLGQTGVDSGLAMSGSGNQATQLCGMDREARVLRYREEKKNQKFEKTIWYTSRKAYAETRPRIKGRFAKQANMLTEVDEMYGLSGSSMCL
        MSEISYP+GQT VDSGL +SGSGNQATQLCG+DREARVLRYRE++KN+KFEKT+ Y SRKAYAETRPRIKGRFAK+ +M++EVDE+YG + S + L
Subjt:  MSEISYPLGQTGVDSGLAMSGSGNQATQLCGMDREARVLRYREEKKNQKFEKTIWYTSRKAYAETRPRIKGRFAKQANMLTEVDEMYGLSGSSMCL

A0A6J1C060 zinc finger protein CONSTANS-LIKE 52.1e-3585.42Show/hide
Query:  MSEISYPLGQTGVDSGLAMSGSGNQATQLCGMDREARVLRYREEKKNQKFEKTIWYTSRKAYAETRPRIKGRFAKQANMLTEVDEMYGLSGSSMCL
        MSEISYP GQT  DSGLAMSGSGNQATQLCGMDREARVLRYRE++KN+KFEKTI Y SRKAYAETRPRIKGRFAK+ +MLTEVDEMYG  GSSM L
Subjt:  MSEISYPLGQTGVDSGLAMSGSGNQATQLCGMDREARVLRYREEKKNQKFEKTIWYTSRKAYAETRPRIKGRFAKQANMLTEVDEMYGLSGSSMCL

SwissProt top hitse value%identityAlignment
O82117 Zinc finger protein CO39.0e-1562.5Show/hide
Query:  MDREARVLRYREEKKNQKFEKTIWYTSRKAYAETRPRIKGRFAKQANMLTEVDEMYGLSGSSMC
        +DREARV RYRE++K ++FEKTI Y SRKAYAETRPRIKGRFAK+++   EVD+ +  +  S C
Subjt:  MDREARVLRYREEKKNQKFEKTIWYTSRKAYAETRPRIKGRFAKQANMLTEVDEMYGLSGSSMC

Q940T9 Zinc finger protein CONSTANS-LIKE 41.2e-1451.06Show/hide
Query:  MSEISYPLGQTGVDSGLAMSGSG---NQATQLCGMDREARVLRYREEKKNQKFEKTIWYTSRKAYAETRPRIKGRFAKQANMLTEVDEMYGLSG
        ++++SYP G      G A SG+     +A  L   +REARV+RYRE++KN+KFEKTI Y SRKAYAE RPRIKGRFAK+ +   E +++ G  G
Subjt:  MSEISYPLGQTGVDSGLAMSGSG---NQATQLCGMDREARVLRYREEKKNQKFEKTIWYTSRKAYAETRPRIKGRFAKQANMLTEVDEMYGLSG

Q96502 Zinc finger protein CONSTANS-LIKE 21.2e-1460.27Show/hide
Query:  MSGSGNQAT-QLCGMDREARVLRYREEKKNQKFEKTIWYTSRKAYAETRPRIKGRFAKQANMLTEVDEMYGLS
        +SG   Q   QL  M+REARVLRYRE+KK +KF+KTI Y SRKAYAE RPRIKGRFAK+     E +E++  S
Subjt:  MSGSGNQAT-QLCGMDREARVLRYREEKKNQKFEKTIWYTSRKAYAETRPRIKGRFAKQANMLTEVDEMYGLS

Q9FDX8 Zinc finger protein HD14.8e-1652.17Show/hide
Query:  SEISYPLGQTGVDSGLAMSGSGNQATQLCGMDREARVLRYREEKKNQKFEKTIWYTSRKAYAETRPRIKGRFAKQANMLTEVDEMYGLSGSS
        S I  P G   + SG ++      +     MDREARVLRYRE+KK +KFEKTI Y +RKAYAE RPRIKGRFAK++++  EVD+M+  +  S
Subjt:  SEISYPLGQTGVDSGLAMSGSGNQATQLCGMDREARVLRYREEKKNQKFEKTIWYTSRKAYAETRPRIKGRFAKQANMLTEVDEMYGLSGSS

Q9FHH8 Zinc finger protein CONSTANS-LIKE 56.9e-1546.94Show/hide
Query:  ISYPLGQTGVDSGLAMSGSGNQAT--------------QLCGMDREARVLRYREEKKNQKFEKTIWYTSRKAYAETRPRIKGRFAKQANMLTEVDEMY
        +S+ +  + ++ G+   G+ N +               Q   MDREARVLRYRE++KN+KFEKTI Y SRKAYAE+RPRIKGRFAK+    TE D+++
Subjt:  ISYPLGQTGVDSGLAMSGSGNQAT--------------QLCGMDREARVLRYREEKKNQKFEKTIWYTSRKAYAETRPRIKGRFAKQANMLTEVDEMY

Arabidopsis top hitse value%identityAlignment
AT2G24790.1 CONSTANS-like 39.3e-1566.67Show/hide
Query:  MSGSGNQATQLCGMDREARVLRYREEKKNQKFEKTIWYTSRKAYAETRPRIKGRFAKQAN
        M+ +   A QL   +REARVLRYRE++KN+KFEKTI Y SRKAYAE RPRIKGRFAK+ +
Subjt:  MSGSGNQATQLCGMDREARVLRYREEKKNQKFEKTIWYTSRKAYAETRPRIKGRFAKQAN

AT3G02380.1 CONSTANS-like 28.4e-1660.27Show/hide
Query:  MSGSGNQAT-QLCGMDREARVLRYREEKKNQKFEKTIWYTSRKAYAETRPRIKGRFAKQANMLTEVDEMYGLS
        +SG   Q   QL  M+REARVLRYRE+KK +KF+KTI Y SRKAYAE RPRIKGRFAK+     E +E++  S
Subjt:  MSGSGNQAT-QLCGMDREARVLRYREEKKNQKFEKTIWYTSRKAYAETRPRIKGRFAKQANMLTEVDEMYGLS

AT5G15850.1 CONSTANS-like 11.6e-1464.52Show/hide
Query:  ATQLCGMDREARVLRYREEKKNQKFEKTIWYTSRKAYAETRPRIKGRFAKQANMLTEVDEMY
        A  L   DREARVLRYRE+KK +KFEKTI Y SRKAYAE RPRIKGRFAK+ ++  E ++ +
Subjt:  ATQLCGMDREARVLRYREEKKNQKFEKTIWYTSRKAYAETRPRIKGRFAKQANMLTEVDEMY

AT5G24930.1 CONSTANS-like 48.4e-1651.06Show/hide
Query:  MSEISYPLGQTGVDSGLAMSGSG---NQATQLCGMDREARVLRYREEKKNQKFEKTIWYTSRKAYAETRPRIKGRFAKQANMLTEVDEMYGLSG
        ++++SYP G      G A SG+     +A  L   +REARV+RYRE++KN+KFEKTI Y SRKAYAE RPRIKGRFAK+ +   E +++ G  G
Subjt:  MSEISYPLGQTGVDSGLAMSGSG---NQATQLCGMDREARVLRYREEKKNQKFEKTIWYTSRKAYAETRPRIKGRFAKQANMLTEVDEMYGLSG

AT5G57660.1 CONSTANS-like 54.9e-1646.94Show/hide
Query:  ISYPLGQTGVDSGLAMSGSGNQAT--------------QLCGMDREARVLRYREEKKNQKFEKTIWYTSRKAYAETRPRIKGRFAKQANMLTEVDEMY
        +S+ +  + ++ G+   G+ N +               Q   MDREARVLRYRE++KN+KFEKTI Y SRKAYAE+RPRIKGRFAK+    TE D+++
Subjt:  ISYPLGQTGVDSGLAMSGSGNQAT--------------QLCGMDREARVLRYREEKKNQKFEKTIWYTSRKAYAETRPRIKGRFAKQANMLTEVDEMY


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCGGAGATATCGTACCCGTTGGGTCAAACCGGGGTGGATTCGGGTTTAGCGATGTCGGGATCCGGTAACCAAGCGACTCAGTTGTGTGGAATGGATCGGGAG
GCGAGAGTGTTGAGGTACAGAGAGGAGAAGAAGAACCAGAAGTTCGAGAAGACAATCTGGTACACTTCAAGAAAAGCTTATGCAGAAACCCGACCCAGAATCAAA
GGCCGGTTTGCAAAACAGGCCAATATGCTAACGGAGGTCGACGAAATGTATGGGTTGAGTGGTTCGTCTATGTGCTTGAGGCATCACAATGGGAGGGCGGGCGAA
GGCATGAAAATGGCGGTGAGTTCCGTTGAATCTGGCGTCGCGTTGGTCAATCTGCCCCCCGCTGTTCAAGACGCCTCCTGCTGCTCGTCACCGTTGCGGCAGAAG
ATGAGTTCACCCCACCTGCTGCTATGGCGCCGCCGTGAAGATTCGTCGCTGCAAGATCTGGAGGAATCAGAGATCACGAAGCTAGGAGATTGTGTACTCCAAGAG
GGGCACCGAAAGCTTACCCGAAGGAGGTTCTTTAAGTTTTGGCAAGAGTTGGAAGAGGGATGTCGAAGATTGTGTACGCCGAAGAGGGATGCTGAAAGCTTGAGG
CGCACAAGACTTGAGGGGCTTGAGACTTGA
mRNA sequenceShow/hide mRNA sequence
ATGTCGGAGATATCGTACCCGTTGGGTCAAACCGGGGTGGATTCGGGTTTAGCGATGTCGGGATCCGGTAACCAAGCGACTCAGTTGTGTGGAATGGATCGGGAG
GCGAGAGTGTTGAGGTACAGAGAGGAGAAGAAGAACCAGAAGTTCGAGAAGACAATCTGGTACACTTCAAGAAAAGCTTATGCAGAAACCCGACCCAGAATCAAA
GGCCGGTTTGCAAAACAGGCCAATATGCTAACGGAGGTCGACGAAATGTATGGGTTGAGTGGTTCGTCTATGTGCTTGAGGCATCACAATGGGAGGGCGGGCGAA
GGCATGAAAATGGCGGTGAGTTCCGTTGAATCTGGCGTCGCGTTGGTCAATCTGCCCCCCGCTGTTCAAGACGCCTCCTGCTGCTCGTCACCGTTGCGGCAGAAG
ATGAGTTCACCCCACCTGCTGCTATGGCGCCGCCGTGAAGATTCGTCGCTGCAAGATCTGGAGGAATCAGAGATCACGAAGCTAGGAGATTGTGTACTCCAAGAG
GGGCACCGAAAGCTTACCCGAAGGAGGTTCTTTAAGTTTTGGCAAGAGTTGGAAGAGGGATGTCGAAGATTGTGTACGCCGAAGAGGGATGCTGAAAGCTTGAGG
CGCACAAGACTTGAGGGGCTTGAGACTTGA
Protein sequenceShow/hide protein sequence
MSEISYPLGQTGVDSGLAMSGSGNQATQLCGMDREARVLRYREEKKNQKFEKTIWYTSRKAYAETRPRIKGRFAKQANMLTEVDEMYGLSGSSMCLRHHNGRAGE
GMKMAVSSVESGVALVNLPPAVQDASCCSSPLRQKMSSPHLLLWRRREDSSLQDLEESEITKLGDCVLQEGHRKLTRRRFFKFWQELEEGCRRLCTPKRDAESLR
RTRLEGLET