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Moc11g30200 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc11g30200
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionRetrotrans_gag domain-containing protein
Genome locationchr11:22066340..22067244
RNA-Seq ExpressionMoc11g30200
SyntenyMoc11g30200
Gene Ontology termsGO:0015074 - DNA integration (biological process)
GO:0090502 - RNA phosphodiester bond hydrolysis, endonucleolytic (biological process)
GO:0030430 - host cell cytoplasm (cellular component)
GO:0003676 - nucleic acid binding (molecular function)
GO:0004523 - RNA-DNA hybrid ribonuclease activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022144467.1 uncharacterized protein LOC111014147 [Momordica charantia]1.6e-1879.31Show/hide
Query:  VLGRPTMHMLKAIQSTYNQSMKFPPPGGIGEIKGEQQVLRECYYTSMRGNDKASTAGG
        +LGRPTMHML+AI STY+QSMKFP PGG+GEIKGEQ+V RECYYTSMR ND+ ST GG
Subjt:  VLGRPTMHMLKAIQSTYNQSMKFPPPGGIGEIKGEQQVLRECYYTSMRGNDKASTAGG

XP_022146774.1 uncharacterized protein LOC111015901 [Momordica charantia]2.4e-1981.36Show/hide
Query:  VLGRPTMHMLKAIQSTYNQSMKFPPPGGIGEIKGEQQVLRECYYTSMRGNDKASTAGGH
        +L RPTMHML+AI STY+QSMKFP PGG+GEIKGEQ+V RECYYTSMRGNDKAST G H
Subjt:  VLGRPTMHMLKAIQSTYNQSMKFPPPGGIGEIKGEQQVLRECYYTSMRGNDKASTAGGH

XP_022150028.1 uncharacterized protein LOC111018300 [Momordica charantia]5.9e-1877.97Show/hide
Query:  VLGRPTMHMLKAIQSTYNQSMKFPPPGGIGEIKGEQQVLRECYYTSMRGNDKASTAGGH
        +LGRPT+HMLKAI STY+QS+ FP  GGIGEIK EQ+V RECYYTSM+GND+ASTAGGH
Subjt:  VLGRPTMHMLKAIQSTYNQSMKFPPPGGIGEIKGEQQVLRECYYTSMRGNDKASTAGGH

XP_022150858.1 uncharacterized protein LOC111018902 [Momordica charantia]3.1e-1981.36Show/hide
Query:  VLGRPTMHMLKAIQSTYNQSMKFPPPGGIGEIKGEQQVLRECYYTSMRGNDKASTAGGH
        +LGRPTMHMLKAI S Y+QS+KFP PGGIGEIKGEQ+V RECYY SM+GNDKASTAG H
Subjt:  VLGRPTMHMLKAIQSTYNQSMKFPPPGGIGEIKGEQQVLRECYYTSMRGNDKASTAGGH

XP_022155902.1 uncharacterized protein LOC111022905 [Momordica charantia]3.5e-1879.31Show/hide
Query:  VLGRPTMHMLKAIQSTYNQSMKFPPPGGIGEIKGEQQVLRECYYTSMRGNDKASTAGG
        +LGR TMHMLKAI STY+QSMKFP PGG+GEIKGEQ+V RECYYTSM+GND+ ST GG
Subjt:  VLGRPTMHMLKAIQSTYNQSMKFPPPGGIGEIKGEQQVLRECYYTSMRGNDKASTAGG

TrEMBL top hitse value%identityAlignment
A0A6J1CTS4 uncharacterized protein LOC1110141477.5e-1979.31Show/hide
Query:  VLGRPTMHMLKAIQSTYNQSMKFPPPGGIGEIKGEQQVLRECYYTSMRGNDKASTAGG
        +LGRPTMHML+AI STY+QSMKFP PGG+GEIKGEQ+V RECYYTSMR ND+ ST GG
Subjt:  VLGRPTMHMLKAIQSTYNQSMKFPPPGGIGEIKGEQQVLRECYYTSMRGNDKASTAGG

A0A6J1CZ14 uncharacterized protein LOC1110159011.2e-1981.36Show/hide
Query:  VLGRPTMHMLKAIQSTYNQSMKFPPPGGIGEIKGEQQVLRECYYTSMRGNDKASTAGGH
        +L RPTMHML+AI STY+QSMKFP PGG+GEIKGEQ+V RECYYTSMRGNDKAST G H
Subjt:  VLGRPTMHMLKAIQSTYNQSMKFPPPGGIGEIKGEQQVLRECYYTSMRGNDKASTAGGH

A0A6J1D8C9 uncharacterized protein LOC1110183002.9e-1877.97Show/hide
Query:  VLGRPTMHMLKAIQSTYNQSMKFPPPGGIGEIKGEQQVLRECYYTSMRGNDKASTAGGH
        +LGRPT+HMLKAI STY+QS+ FP  GGIGEIK EQ+V RECYYTSM+GND+ASTAGGH
Subjt:  VLGRPTMHMLKAIQSTYNQSMKFPPPGGIGEIKGEQQVLRECYYTSMRGNDKASTAGGH

A0A6J1DAK4 uncharacterized protein LOC1110189021.5e-1981.36Show/hide
Query:  VLGRPTMHMLKAIQSTYNQSMKFPPPGGIGEIKGEQQVLRECYYTSMRGNDKASTAGGH
        +LGRPTMHMLKAI S Y+QS+KFP PGGIGEIKGEQ+V RECYY SM+GNDKASTAG H
Subjt:  VLGRPTMHMLKAIQSTYNQSMKFPPPGGIGEIKGEQQVLRECYYTSMRGNDKASTAGGH

A0A6J1DQL9 uncharacterized protein LOC1110229051.7e-1879.31Show/hide
Query:  VLGRPTMHMLKAIQSTYNQSMKFPPPGGIGEIKGEQQVLRECYYTSMRGNDKASTAGG
        +LGR TMHMLKAI STY+QSMKFP PGG+GEIKGEQ+V RECYYTSM+GND+ ST GG
Subjt:  VLGRPTMHMLKAIQSTYNQSMKFPPPGGIGEIKGEQQVLRECYYTSMRGNDKASTAGG

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCGAGTATTCTCGACAACTTTGAGTGGGTTGGCCAGGGTATGCTTTCGATAGTTGAAGCGAGGATCGATCTCGAGCTTCAAGAACCTAGCCAGGGCATTTGTGACCC
AGTTCGTAGAGGGACGAAGTCAAATCCGACCCGTGGCTTATCTTCTAACCATCAAACAGAGGGCAACAGAGAGCCTTCACGACTACGAGAATTCTTCCACTCAAAGAAAG
AACCAGAGGGAAAATGGTCTGACAAGAAGAGGGAGAGATCTGGGGATAAGCCACAGTCGTCGAGGTGGGAGAAAGAGATCGGATTGGCCAGAAGGATCCGCCTCAGAGGA
AGTCCGAGAAATATAACCCAACCACGATCCCACTTGAGATTGCTTCGATCTCAAAGAAGAAGTGGAATGACTCATTCGGAGAGGGTATCTCAAAGAGTATTAGGAAGACC
AACAATGCACATGCTCAAGGCAATACAATCTACATATAACCAGTCTATGAAATTCCCACCACCTGGTGGAATCGGTGAGATCAAAGGAGAGCAACAAGTATTGCGTGAGT
GTTATTACACTTCAATGAGGGGCAACGACAAGGCTTCTACTGCGGGTGGCCATTGA
mRNA sequenceShow/hide mRNA sequence
ATGTCGAGTATTCTCGACAACTTTGAGTGGGTTGGCCAGGGTATGCTTTCGATAGTTGAAGCGAGGATCGATCTCGAGCTTCAAGAACCTAGCCAGGGCATTTGTGACCC
AGTTCGTAGAGGGACGAAGTCAAATCCGACCCGTGGCTTATCTTCTAACCATCAAACAGAGGGCAACAGAGAGCCTTCACGACTACGAGAATTCTTCCACTCAAAGAAAG
AACCAGAGGGAAAATGGTCTGACAAGAAGAGGGAGAGATCTGGGGATAAGCCACAGTCGTCGAGGTGGGAGAAAGAGATCGGATTGGCCAGAAGGATCCGCCTCAGAGGA
AGTCCGAGAAATATAACCCAACCACGATCCCACTTGAGATTGCTTCGATCTCAAAGAAGAAGTGGAATGACTCATTCGGAGAGGGTATCTCAAAGAGTATTAGGAAGACC
AACAATGCACATGCTCAAGGCAATACAATCTACATATAACCAGTCTATGAAATTCCCACCACCTGGTGGAATCGGTGAGATCAAAGGAGAGCAACAAGTATTGCGTGAGT
GTTATTACACTTCAATGAGGGGCAACGACAAGGCTTCTACTGCGGGTGGCCATTGA
Protein sequenceShow/hide protein sequence
MSSILDNFEWVGQGMLSIVEARIDLELQEPSQGICDPVRRGTKSNPTRGLSSNHQTEGNREPSRLREFFHSKKEPEGKWSDKKRERSGDKPQSSRWEKEIGLARRIRLRG
SPRNITQPRSHLRLLRSQRRSGMTHSERVSQRVLGRPTMHMLKAIQSTYNQSMKFPPPGGIGEIKGEQQVLRECYYTSMRGNDKASTAGGH