CuGenDBv2

Gene ID	Moc11g30880
Organism	Momordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
Description	CCHC-type domain-containing protein
Genome location	chr11:22582980..22584658
RNA-Seq Expression	Moc11g30880
Synteny	Moc11g30880
Gene Ontology terms	GO:0003824 - catalytic activity (molecular function) GO:0097159 - organic cyclic compound binding (molecular function) GO:1901363 - heterocyclic compound binding (molecular function)
InterPro domains	NA

Homology

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GenBank top hits

e value

%identity

Alignment

BBG97486.1 hypothetical protein Prudu_006629 [Prunus dulcis]

2.8e-28

36.84

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Query:  MKVTDVITYKKIHKTLKEQPATRMTDKEWTEMDEKAVAIIRLCLSTNVASLVASQKTAMGLMKALTEKYEKLSSNSKVYLIMIYFNIHMEEDSSVNSHVN
        M++ D +  KK+++ L E     M D++WT +D +A+ +IRL LS NVA  +A +KT  GLM AL+  YEK S+++KV+L+   FN+ M E +SV  H+N
Subjt:  MKVTDVITYKKIHKTLKEQPATRMTDKEWTEMDEKAVAIIRLCLSTNVASLVASQKTAMGLMKALTEKYEKLSSNSKVYLIMIYFNIHMEEDSSVNSHVN

Query:  EVTKLMNKLESMEITFSREVKAIKLLSSLPNNWKTMKTAMSNFLGDKSLKFSDICDAAIAKEIQRKGSGEIPHPRLVVMYRGSRGKGKKNSLVRCSVDCQ
        E+  +  +L S+ I F  EV+A+ LLSSLP +W    TA+S+  G   L F D+ D  +++EI+R+ SGE    +    +    G+G+ N   R S D +
Subjt:  EVTKLMNKLESMEITFSREVKAIKLLSSLPNNWKTMKTAMSNFLGDKSLKFSDICDAAIAKEIQRKGSGEIPHPRLVVMYRGSRGKGKKNSLVRCSVDCQ

Query:  DKAPVFRWFGELMKSHSQEDVRSCRCNE
         K+           SHS + V    C +
Subjt:  DKAPVFRWFGELMKSHSQEDVRSCRCNE

KAG7561662.1 Zinc finger CCHC-type superfamily [Arabidopsis thaliana x Arabidopsis arenosa]

1.1e-29

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Query:  MKVTDVITYKKIHKTLKEQPATRMTDKEWTEMDEKAVAIIRLCLSTNVASLVASQKTAMGLMKALTEKYEKLSSNSKVYLIMIYFNIHMEEDSSVNSHVN
        M++ D +  KK+H+ L  +P  +M  +EW  +D + + +IRL LS NVA  VA +KT  GLMK L++ YEK S+N+KV+L+   F++ MEE   V +HVN
Subjt:  MKVTDVITYKKIHKTLKEQPATRMTDKEWTEMDEKAVAIIRLCLSTNVASLVASQKTAMGLMKALTEKYEKLSSNSKVYLIMIYFNIHMEEDSSVNSHVN

Query:  EVTKLMNKLESMEITFSREVKAIKLLSSLPNNWKTMKTAMSNFLGDKSLKFSDICDAAIAKEIQRKGSGEIPHPRLVVMYRGSRGKGKKN
        E   ++N+L S+EI F  EV+A+ L++SLPN+W+ M+ A+SN +G++ LKF D+ D  + +E++R  +GE        +    R + ++N
Subjt:  EVTKLMNKLESMEITFSREVKAIKLLSSLPNNWKTMKTAMSNFLGDKSLKFSDICDAAIAKEIQRKGSGEIPHPRLVVMYRGSRGKGKKN

KAG7584790.1 Zinc finger CCHC-type superfamily [Arabidopsis thaliana x Arabidopsis arenosa]

6.7e-30

40.53

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Query:  MKVTDVITYKKIHKTLKEQPATRMTDKEWTEMDEKAVAIIRLCLSTNVASLVASQKTAMGLMKALTEKYEKLSSNSKVYLIMIYFNIHMEEDSSVNSHVN
        M++ D +  KK+H+ L  +P  +M  +EW  +D + + +IRL LS NVA  VA +KT  GLMK L++ YEK S+N+KV+L+   F++ MEE   V +HVN
Subjt:  MKVTDVITYKKIHKTLKEQPATRMTDKEWTEMDEKAVAIIRLCLSTNVASLVASQKTAMGLMKALTEKYEKLSSNSKVYLIMIYFNIHMEEDSSVNSHVN

Query:  EVTKLMNKLESMEITFSREVKAIKLLSSLPNNWKTMKTAMSNFLGDKSLKFSDICDAAIAKEIQRKGSGEIPHPRLVVMYRGSRGKGKKN
        E   ++N+L S+EI F  EV+A+ LL+SLPN+W+ M+ A+SN +G++ LKF D+ D  + +E++R  +GE        +    R + ++N
Subjt:  EVTKLMNKLESMEITFSREVKAIKLLSSLPNNWKTMKTAMSNFLGDKSLKFSDICDAAIAKEIQRKGSGEIPHPRLVVMYRGSRGKGKKN

KAG7593230.1 Pentatricopeptide repeat [Arabidopsis thaliana x Arabidopsis arenosa]

6.7e-30

40.53

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Query:  MKVTDVITYKKIHKTLKEQPATRMTDKEWTEMDEKAVAIIRLCLSTNVASLVASQKTAMGLMKALTEKYEKLSSNSKVYLIMIYFNIHMEEDSSVNSHVN
        M++ D +  KK+H+ L  +P  +M  +EW  +D + + +IRL LS NVA  VA +KT  GLMK L++ YEK S+N+KV+L+   F++ MEE   V +HVN
Subjt:  MKVTDVITYKKIHKTLKEQPATRMTDKEWTEMDEKAVAIIRLCLSTNVASLVASQKTAMGLMKALTEKYEKLSSNSKVYLIMIYFNIHMEEDSSVNSHVN

Query:  EVTKLMNKLESMEITFSREVKAIKLLSSLPNNWKTMKTAMSNFLGDKSLKFSDICDAAIAKEIQRKGSGEIPHPRLVVMYRGSRGKGKKN
        E   ++N+L S+EI F  EV+A+ LL+SLPN+W+ M+ A+SN +G++ LKF D+ D  + +E++R  +GE        +    R + ++N
Subjt:  EVTKLMNKLESMEITFSREVKAIKLLSSLPNNWKTMKTAMSNFLGDKSLKFSDICDAAIAKEIQRKGSGEIPHPRLVVMYRGSRGKGKKN

VDD56318.1 unnamed protein product [Brassica oleracea]

3.6e-31

45.29

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Query:  MKVTDVITYKKIHKTLKEQPATRMTDKEWTEMDEKAVAIIRLCLSTNVASLVASQKTAMGLMKALTEKYEKLSSNSKVYLIMIYFNIHMEEDSSVNSHVN
        M++ D +  KK+H+ L ++P  ++   EW  +D + + +IRL LS NVA  VA +KT  GLMK L++ YEK S+N+KV+L+   F++ MEE   V +HVN
Subjt:  MKVTDVITYKKIHKTLKEQPATRMTDKEWTEMDEKAVAIIRLCLSTNVASLVASQKTAMGLMKALTEKYEKLSSNSKVYLIMIYFNIHMEEDSSVNSHVN

Query:  EVTKLMNKLESMEITFSREVKAIKLLSSLPNNWKTMKTAMSNFLGDKSLKFSDICDAAIAKEIQRKGSGE
        E   ++N+L S+EI F  EV+A+ LL+SLPN+W+ M+ A+SNF+G + LKF+D+ D  +A+E++R  SGE
Subjt:  EVTKLMNKLESMEITFSREVKAIKLLSSLPNNWKTMKTAMSNFLGDKSLKFSDICDAAIAKEIQRKGSGE

TrEMBL top hits

e value

%identity

Alignment

A0A0D3AEM1 CCHC-type domain-containing protein

5.0e-31

44.71

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Query:  MKVTDVITYKKIHKTLKEQPATRMTDKEWTEMDEKAVAIIRLCLSTNVASLVASQKTAMGLMKALTEKYEKLSSNSKVYLIMIYFNIHMEEDSSVNSHVN
        M++ D +  KK+H+ L ++P  +M   EW  +D + + +IRL LS NVA  V  +KT  GLMK L++ YEK S+NSKV+L+   F++ MEE   V +H+N
Subjt:  MKVTDVITYKKIHKTLKEQPATRMTDKEWTEMDEKAVAIIRLCLSTNVASLVASQKTAMGLMKALTEKYEKLSSNSKVYLIMIYFNIHMEEDSSVNSHVN

Query:  EVTKLMNKLESMEITFSREVKAIKLLSSLPNNWKTMKTAMSNFLGDKSLKFSDICDAAIAKEIQRKGSGE
        E   ++N+L S+EI F  EV+A+ LL+SLPN+W++M+ A+SN +G + LKF+D+ D  +A+E++R  SGE
Subjt:  EVTKLMNKLESMEITFSREVKAIKLLSSLPNNWKTMKTAMSNFLGDKSLKFSDICDAAIAKEIQRKGSGE

A0A0D3BM55 Uncharacterized protein

2.9e-31

45.88

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Query:  MKVTDVITYKKIHKTLKEQPATRMTDKEWTEMDEKAVAIIRLCLSTNVASLVASQKTAMGLMKALTEKYEKLSSNSKVYLIMIYFNIHMEEDSSVNSHVN
        M++ D +  KK+H+TL ++P  +M   EW  +D + + +IRL LS NVA  VA +KT  GLMK L++ YEK S+N+KV+L+   F++ MEE   V +HVN
Subjt:  MKVTDVITYKKIHKTLKEQPATRMTDKEWTEMDEKAVAIIRLCLSTNVASLVASQKTAMGLMKALTEKYEKLSSNSKVYLIMIYFNIHMEEDSSVNSHVN

Query:  EVTKLMNKLESMEITFSREVKAIKLLSSLPNNWKTMKTAMSNFLGDKSLKFSDICDAAIAKEIQRKGSGE
        E   ++N+L S+EI F  EV+A+ LL+SLPN+W+ M+ A+SN +G + LKF+D+ D  +A+E++R  SGE
Subjt:  EVTKLMNKLESMEITFSREVKAIKLLSSLPNNWKTMKTAMSNFLGDKSLKFSDICDAAIAKEIQRKGSGE

A0A0D3CS45 Uncharacterized protein

4.2e-30

44.71

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Query:  MKVTDVITYKKIHKTLKEQPATRMTDKEWTEMDEKAVAIIRLCLSTNVASLVASQKTAMGLMKALTEKYEKLSSNSKVYLIMIYFNIHMEEDSSVNSHVN
        M++ D +  KK+H+ L ++P  +M   EW  +D + + +IRL LS NVA  VA +K   GLMK L++ YEK S+N+KV+L+   F++ MEE   V +HVN
Subjt:  MKVTDVITYKKIHKTLKEQPATRMTDKEWTEMDEKAVAIIRLCLSTNVASLVASQKTAMGLMKALTEKYEKLSSNSKVYLIMIYFNIHMEEDSSVNSHVN

Query:  EVTKLMNKLESMEITFSREVKAIKLLSSLPNNWKTMKTAMSNFLGDKSLKFSDICDAAIAKEIQRKGSGE
        E   ++N+L S+EI F  EV+A+ LL+SLPN+W+ M+ A+SN +G + LKF+D+ D  +A+E++R  SGE
Subjt:  EVTKLMNKLESMEITFSREVKAIKLLSSLPNNWKTMKTAMSNFLGDKSLKFSDICDAAIAKEIQRKGSGE

A0A0D3DMW7 CCHC-type domain-containing protein

1.6e-29

43.53

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Query:  MKVTDVITYKKIHKTLKEQPATRMTDKEWTEMDEKAVAIIRLCLSTNVASLVASQKTAMGLMKALTEKYEKLSSNSKVYLIMIYFNIHMEEDSSVNSHVN
        M++ D +  KK+H+ L ++P  +M   EW  +D + + +IRL LS NV   +A +KT  GLMK L++ YEK S N+KV+L+   F++ MEE   V +HVN
Subjt:  MKVTDVITYKKIHKTLKEQPATRMTDKEWTEMDEKAVAIIRLCLSTNVASLVASQKTAMGLMKALTEKYEKLSSNSKVYLIMIYFNIHMEEDSSVNSHVN

Query:  EVTKLMNKLESMEITFSREVKAIKLLSSLPNNWKTMKTAMSNFLGDKSLKFSDICDAAIAKEIQRKGSGE
        E   ++N+L S+EI F  EV+A+ LL+SLPN+W+ M+ A++N +G + LKF+D+ D  +A+E++R  SGE
Subjt:  EVTKLMNKLESMEITFSREVKAIKLLSSLPNNWKTMKTAMSNFLGDKSLKFSDICDAAIAKEIQRKGSGE

A0A3P6FTI2 Abhydrolase_3 domain-containing protein

1.7e-31

45.29

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Query:  MKVTDVITYKKIHKTLKEQPATRMTDKEWTEMDEKAVAIIRLCLSTNVASLVASQKTAMGLMKALTEKYEKLSSNSKVYLIMIYFNIHMEEDSSVNSHVN
        M++ D +  KK+H+ L ++P  ++   EW  +D + + +IRL LS NVA  VA +KT  GLMK L++ YEK S+N+KV+L+   F++ MEE   V +HVN
Subjt:  MKVTDVITYKKIHKTLKEQPATRMTDKEWTEMDEKAVAIIRLCLSTNVASLVASQKTAMGLMKALTEKYEKLSSNSKVYLIMIYFNIHMEEDSSVNSHVN

Query:  EVTKLMNKLESMEITFSREVKAIKLLSSLPNNWKTMKTAMSNFLGDKSLKFSDICDAAIAKEIQRKGSGE
        E   ++N+L S+EI F  EV+A+ LL+SLPN+W+ M+ A+SNF+G + LKF+D+ D  +A+E++R  SGE
Subjt:  EVTKLMNKLESMEITFSREVKAIKLLSSLPNNWKTMKTAMSNFLGDKSLKFSDICDAAIAKEIQRKGSGE

SwissProt top hits

e value

%identity

Alignment

P10978 Retrovirus-related Pol polyprotein from transposon TNT 1-94

2.0e-13

26.84

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Query:  KVTDVITYKKIHKTL---KEQPATRMTDKEWTEMDEKAVAIIRLCLSTNVASLVASQKTAMGLMKALTEKYEKLSSNSKVYLIMIYFNIHMEEDSSVNSH
        ++ D++  + +HK L    ++P T M  ++W ++DE+A + IRL LS +V + +  + TA G+   L   Y   +  +K+YL    + +HM E ++  SH
Subjt:  KVTDVITYKKIHKTL---KEQPATRMTDKEWTEMDEKAVAIIRLCLSTNVASLVASQKTAMGLMKALTEKYEKLSSNSKVYLIMIYFNIHMEEDSSVNSH

Query:  VNEVTKLMNKLESMEITFSREVKAIKLLSSLPNNWKTMKTAMSNFLGDKSLKFSDICDAAIAKEIQRKGSGEIPHPRLVVMYRGSRGKGKKNSLVRCSVD
        +N    L+ +L ++ +    E KAI LL+SLP+++  + T + +  G  +++  D+  A +  E  RK   E     L+   RG   +   N+  R    
Subjt:  VNEVTKLMNKLESMEITFSREVKAIKLLSSLPNNWKTMKTAMSNFLGDKSLKFSDICDAAIAKEIQRKGSGEIPHPRLVVMYRGSRGKGKKNSLVRCSVD

Query:  CQDKAPVFRWFGELMKSHSQEDVRSC-RCNE
         +             K+ S+  VR+C  CN+
Subjt:  CQDKAPVFRWFGELMKSHSQEDVRSC-RCNE

Arabidopsis top hits

e value

%identity

Alignment

AT3G29785.1 unknown protein

2.5e-06

37.18

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Query:  MKVTDVITYKKIHKTLKEQPATRMTDKEWTEMDEKAVAIIRLCLSTNVASLVASQKTAMGLMKALTEKYEKLSSNSKV
        MK+ D +  KK+H+ L ++  T M+  +W  +  + + +IRL +S N+A  VA +K+  GLMK L++ Y+K S+N+ V
Subjt:  MKVTDVITYKKIHKTLKEQPATRMTDKEWTEMDEKAVAIIRLCLSTNVASLVASQKTAMGLMKALTEKYEKLSSNSKV

Sequences

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CDS sequence

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ATGAAAGTGACAGATGTTATTACATACAAGAAAATACACAAAACCCTGAAAGAACAACCAGCTACTCGGATGACAGATAAGGAATGGACGGAGATGGATGAAAAGGCTGT
AGCGATCATTAGGTTGTGTTTGTCAACGAATGTGGCAAGTCTCGTGGCGAGTCAGAAAACAGCGATGGGGTTGATGAAGGCACTGACGGAAAAATATGAAAAACTCTCTT
CCAATAGCAAGGTGTATCTCATTATGATATACTTCAACATTCATATGGAGGAAGACTCGTCGGTGAACTCCCACGTCAATGAGGTGACTAAATTGATGAATAAGTTAGAG
TCGATGGAGATCACATTTTCAAGAGAGGTGAAGGCTATAAAGTTGTTGTCTTCTTTGCCTAACAATTGGAAAACGATGAAGACGGCGATGTCAAATTTTTTGGGAGACAA
GAGTCTAAAATTTTCAGATATTTGTGATGCTGCAATTGCTAAGGAGATTCAAAGGAAAGGAAGTGGGGAGATTCCACATCCACGTCTGGTGGTTATGTACAGGGGAAGTA
GAGGAAAGGGAAAGAAGAACAGCCTAGTGAGGTGTTCAGTAGACTGTCAGGATAAGGCCCCAGTTTTCAGATGGTTTGGCGAGCTGATGAAGTCACATAGCCAAGAAGAC
GTTAGAAGTTGTCGCTGCAATGAGAGTAGAGCCTTGGTCGGTGCCAAGAAGATAATGTTGATCGGTTATAAGTTGTTGATGCTGTCAGAACTGAGACACGAGAGACACTA
TCGTTTCAGTGGGAAGTAA

mRNA sequence

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Protein sequence

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MKVTDVITYKKIHKTLKEQPATRMTDKEWTEMDEKAVAIIRLCLSTNVASLVASQKTAMGLMKALTEKYEKLSSNSKVYLIMIYFNIHMEEDSSVNSHVNEVTKLMNKLE
SMEITFSREVKAIKLLSSLPNNWKTMKTAMSNFLGDKSLKFSDICDAAIAKEIQRKGSGEIPHPRLVVMYRGSRGKGKKNSLVRCSVDCQDKAPVFRWFGELMKSHSQED
VRSCRCNESRALVGAKKIMLIGYKLLMLSELRHERHYRFSGK

Moc11g30880 (gene) of Bitter gourd (OHB3-1) v2 genome