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Moc11g31230 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc11g31230
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionCCHC-type domain-containing protein
Genome locationchr11:22828292..22829167
RNA-Seq ExpressionMoc11g31230
SyntenyMoc11g31230
Gene Ontology termsGO:0003676 - nucleic acid binding (molecular function)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsIPR001878 - Zinc finger, CCHC-type
IPR021109 - Aspartic peptidase domain superfamily
IPR036875 - Zinc finger, CCHC-type superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0063032.1 zf-CCHC domain-containing protein [Cucumis melo var. makuwa]2.9e-3341.71Show/hide
Query:  KQENPYARPSNLKKCYRCGQTGHFSNECSERKKLALMEEGSEQEDSGEKEEKFSRNEQEIFEEGDDGE--------------------------------
        K +N Y RPS L KC+RCG+  H SN C +RK +AL E+        ++EE+    E E+ E  D+                                  
Subjt:  KQENPYARPSNLKKCYRCGQTGHFSNECSERKKLALMEEGSEQEDSGEKEEKFSRNEQEIFEEGDDGE--------------------------------

Query:  WVCDVIIDSGSCENVVSNALVEALRLEIEPHPNPYKIGWIKKRNEVAITKICTIPLSIGKHYKDQIICEVIDMDACHILLRDLDNLIFRQFTKEGRTLTN
         VCDVII+SGS EN V+  LV AL L+ +PHP+PYKIGW+KK  E  I +ICTIPLSIG  YKDQI+C+VI+MD CH+LL DL N+I   +    +  T+
Subjt:  WVCDVIIDSGSCENVVSNALVEALRLEIEPHPNPYKIGWIKKRNEVAITKICTIPLSIGKHYKDQIICEVIDMDACHILLRDLDNLIFRQFTKEGRTLTN

Query:  LIVLVRKSPYY
             RK  Y+
Subjt:  LIVLVRKSPYY

TYK16316.1 zf-CCHC domain-containing protein [Cucumis melo var. makuwa]2.2e-3341.71Show/hide
Query:  KQENPYARPSNLKKCYRCGQTGHFSNECSERKKLALMEEGSEQEDSGEKEEKFSRNEQEIFEEGDDGE--------------------------------
        K +N Y RPS L KC+RCG+  H SN C +RK +AL E+        ++EE+    E E+ E  D+                                  
Subjt:  KQENPYARPSNLKKCYRCGQTGHFSNECSERKKLALMEEGSEQEDSGEKEEKFSRNEQEIFEEGDDGE--------------------------------

Query:  WVCDVIIDSGSCENVVSNALVEALRLEIEPHPNPYKIGWIKKRNEVAITKICTIPLSIGKHYKDQIICEVIDMDACHILLRDLDNLIFRQFTKEGRTLTN
         VCDVII+SGS EN V+  LV AL L+ +PHP+PYKIGW+KK  E  I +ICTIPLSIG  YKDQI+C+VI+MD CH+LL DL N+I   +    +  T+
Subjt:  WVCDVIIDSGSCENVVSNALVEALRLEIEPHPNPYKIGWIKKRNEVAITKICTIPLSIGKHYKDQIICEVIDMDACHILLRDLDNLIFRQFTKEGRTLTN

Query:  LIVLVRKSPYY
             RK  Y+
Subjt:  LIVLVRKSPYY

XP_031741035.1 uncharacterized protein LOC116403692 [Cucumis sativus]8.3e-3340.33Show/hide
Query:  ENLNKIIGIGKKRMN-PSKEEMRNQKHHLSGQPTIGKNSISKQ--------------------ENPYARPSNLKKCYRCGQTGHFSNECSERKKLALMEE
        E + ++I I  K +N  S  E  + K   + QP+    +  K+                    +N Y+RPS L KC+RCGQTGH S+ C +RK +A+ EE
Subjt:  ENLNKIIGIGKKRMN-PSKEEMRNQKHHLSGQPTIGKNSISKQ--------------------ENPYARPSNLKKCYRCGQTGHFSNECSERKKLALMEE

Query:  GSE-QEDSGEKEEKFSRNEQEIFEEGDDGE---------------------------------WVCDVIIDSGSCENVVSNALVEALRLEIEPHPNPYKI
        G +  EDS E EE     E E+  E DDGE                                  VCDVIIDSGS EN V+  LV  L L+ E HPNPYKI
Subjt:  GSE-QEDSGEKEEKFSRNEQEIFEEGDDGE---------------------------------WVCDVIIDSGSCENVVSNALVEALRLEIEPHPNPYKI

Query:  GWIKKRNEVAITKICTIPLSIGKHYKDQIICEVIDMDACHILL
        GW++K  E  +++ICT+PLSIG  YKDQI+C+VI+MD CH+LL
Subjt:  GWIKKRNEVAITKICTIPLSIGKHYKDQIICEVIDMDACHILL

XP_031744062.1 uncharacterized protein LOC116404773 [Cucumis sativus]4.1e-3239.23Show/hide
Query:  VEEEEDHPVDLDLLIQRENLNKIIGIGKKRMN-PSKEEMRNQKHHLSGQPTIGKNSISKQ--------------------ENPYARPSNLKKCYRCGQTG
        + E E H V        E + ++I I  K +N  S  E  + K   + QP+       K+                    +N Y+RPS L KC+RCGQTG
Subjt:  VEEEEDHPVDLDLLIQRENLNKIIGIGKKRMN-PSKEEMRNQKHHLSGQPTIGKNSISKQ--------------------ENPYARPSNLKKCYRCGQTG

Query:  HFSNECSERKKLALMEEGSE-QEDSGEKEEKFSRNEQEIFEEGDDGE---------------------------------WVCDVIIDSGSCENVVSNAL
        H SN C +RK +A+ EEG +  EDS E EE     E E+  E DDGE                                  VCDVIIDSGS EN V+  L
Subjt:  HFSNECSERKKLALMEEGSE-QEDSGEKEEKFSRNEQEIFEEGDDGE---------------------------------WVCDVIIDSGSCENVVSNAL

Query:  VEALRLEIEPHPNPYKIGWIKKRNEVAITKICTIPLSIGKHYKDQIICEVIDMDACHILL
        V  L L+ E HP PYKIGW++K  E  +++ICT+PLSIG  YKDQI+C+VI+MD CH+LL
Subjt:  VEALRLEIEPHPNPYKIGWIKKRNEVAITKICTIPLSIGKHYKDQIICEVIDMDACHILL

XP_038976596.1 uncharacterized protein LOC113461736 [Phoenix dactylifera]5.4e-3247.74Show/hide
Query:  KQENPYARPSNLKKCYRCGQTGHFSNECSERKKLALMEEGSEQEDSGEKEEKFSRNEQEIFEEGD-------DGEWVCDVIIDSGSCENVVSNALVEALR
        K  NPYAR +++ KCYRCG+ GH SNEC  RK + L+    E E+  E+EE+    +  ++E  D         + +C++IID+GSC+N V+  LV+ LR
Subjt:  KQENPYARPSNLKKCYRCGQTGHFSNECSERKKLALMEEGSEQEDSGEKEEKFSRNEQEIFEEGD-------DGEWVCDVIIDSGSCENVVSNALVEALR

Query:  LEIEPHPNPYKIGWIKKRNEVAITKICTIPLSIGKHYKDQIICEVIDMDACHILL
        L  E HP+PY IGW+KK  +V +T++C +P+SIGKHYKD+++C+VIDMDA H+LL
Subjt:  LEIEPHPNPYKIGWIKKRNEVAITKICTIPLSIGKHYKDQIICEVIDMDACHILL

TrEMBL top hitse value%identityAlignment
A0A2P5EC93 Zinc finger, CCHC-type5.8e-3247.22Show/hide
Query:  NPYARPSNLKKCYRCGQTGHFSNECSERKKLALMEEGSEQEDSGEKEEKFSRN--EQEIFEEGDDGE---------------------------------
        +PYARP NL KC+RC Q GH SN C  R+ + L++     ED GE E+    +  E   F EGD+GE                                 
Subjt:  NPYARPSNLKKCYRCGQTGHFSNECSERKKLALMEEGSEQEDSGEKEEKFSRN--EQEIFEEGDDGE---------------------------------

Query:  WVCDVIIDSGSCENVVSNALVEALRLEIEPHPNPYKIGWIKKRNEVAITKICTIPLSIGKHYKDQIICEVIDMDACHILL
         VC+VIIDSGS ENVVS ALV+ L L+ E HP+PYKI WIKK  EV + ++C IPLSIGK+YK +I+C+V+DMDACHILL
Subjt:  WVCDVIIDSGSCENVVSNALVEALRLEIEPHPNPYKIGWIKKRNEVAITKICTIPLSIGKHYKDQIICEVIDMDACHILL

A0A5A7V462 Zf-CCHC domain-containing protein1.4e-3341.71Show/hide
Query:  KQENPYARPSNLKKCYRCGQTGHFSNECSERKKLALMEEGSEQEDSGEKEEKFSRNEQEIFEEGDDGE--------------------------------
        K +N Y RPS L KC+RCG+  H SN C +RK +AL E+        ++EE+    E E+ E  D+                                  
Subjt:  KQENPYARPSNLKKCYRCGQTGHFSNECSERKKLALMEEGSEQEDSGEKEEKFSRNEQEIFEEGDDGE--------------------------------

Query:  WVCDVIIDSGSCENVVSNALVEALRLEIEPHPNPYKIGWIKKRNEVAITKICTIPLSIGKHYKDQIICEVIDMDACHILLRDLDNLIFRQFTKEGRTLTN
         VCDVII+SGS EN V+  LV AL L+ +PHP+PYKIGW+KK  E  I +ICTIPLSIG  YKDQI+C+VI+MD CH+LL DL N+I   +    +  T+
Subjt:  WVCDVIIDSGSCENVVSNALVEALRLEIEPHPNPYKIGWIKKRNEVAITKICTIPLSIGKHYKDQIICEVIDMDACHILLRDLDNLIFRQFTKEGRTLTN

Query:  LIVLVRKSPYY
             RK  Y+
Subjt:  LIVLVRKSPYY

A0A5D3CJ99 Reverse transcriptase4.4e-3252.7Show/hide
Query:  KQENPYARPSNLKKCYRCGQTGHFSNECSERKKLALMEEGSEQEDSGEKEEKFSRNEQEIFEEGDDGEWVCDVIIDSGSCENVVSNALVEALRLEIEPHP
        K +N Y RPS L KC+RC QT + SN C +RK +AL E   E+ DS   + K    E +    G     VCDVIIDSGS EN ++  LV  L L+ E HP
Subjt:  KQENPYARPSNLKKCYRCGQTGHFSNECSERKKLALMEEGSEQEDSGEKEEKFSRNEQEIFEEGDDGEWVCDVIIDSGSCENVVSNALVEALRLEIEPHP

Query:  NPYKIGWIKKRNEVAITKICTIPLSIGKHYKDQIICEVIDMDACHILL
        NP+KIGW+ K  E  +++ICT+PLSIG  YKDQIIC+VIDMD CH+LL
Subjt:  NPYKIGWIKKRNEVAITKICTIPLSIGKHYKDQIICEVIDMDACHILL

A0A5D3D0X3 Zf-CCHC domain-containing protein1.1e-3341.71Show/hide
Query:  KQENPYARPSNLKKCYRCGQTGHFSNECSERKKLALMEEGSEQEDSGEKEEKFSRNEQEIFEEGDDGE--------------------------------
        K +N Y RPS L KC+RCG+  H SN C +RK +AL E+        ++EE+    E E+ E  D+                                  
Subjt:  KQENPYARPSNLKKCYRCGQTGHFSNECSERKKLALMEEGSEQEDSGEKEEKFSRNEQEIFEEGDDGE--------------------------------

Query:  WVCDVIIDSGSCENVVSNALVEALRLEIEPHPNPYKIGWIKKRNEVAITKICTIPLSIGKHYKDQIICEVIDMDACHILLRDLDNLIFRQFTKEGRTLTN
         VCDVII+SGS EN V+  LV AL L+ +PHP+PYKIGW+KK  E  I +ICTIPLSIG  YKDQI+C+VI+MD CH+LL DL N+I   +    +  T+
Subjt:  WVCDVIIDSGSCENVVSNALVEALRLEIEPHPNPYKIGWIKKRNEVAITKICTIPLSIGKHYKDQIICEVIDMDACHILLRDLDNLIFRQFTKEGRTLTN

Query:  LIVLVRKSPYY
             RK  Y+
Subjt:  LIVLVRKSPYY

A0A5D3DJB8 CCHC-type domain-containing protein9.9e-3244.81Show/hide
Query:  SISKQENPYARPSNLKKCYRCGQTGHFSNECSERKKLALMEEGSEQEDSGEKEEKFSRNEQEIFEEGDDGE-------------------W---------
        S  K +N Y RPS LKKC+RCGQ+GH SN C +RK +AL  E S      +KEE    +E+  F E DDG+                   W         
Subjt:  SISKQENPYARPSNLKKCYRCGQTGHFSNECSERKKLALMEEGSEQEDSGEKEEKFSRNEQEIFEEGDDGE-------------------W---------

Query:  ----VCDVIIDSGSCENVVSNALVEALRLEIEPHPNPYKIGWIKKRNEVAITKICTIPLSIGKHYKDQIICEVIDMDACHILL
            VCDVII+S S +N V+  LV  L L+ +PHPNPYKIGW++K  E +I +ICT+PLSIG  YKDQI+ ++I++D CH+LL
Subjt:  ----VCDVIIDSGSCENVVSNALVEALRLEIEPHPNPYKIGWIKKRNEVAITKICTIPLSIGKHYKDQIICEVIDMDACHILL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT4G13320.1 unknown protein1.7e-0428.77Show/hide
Query:  CDVIIDSGSCENVVSNALVEALRLE-IEPHPNPYKIGWIKKRNEVAITKICTIPLSIGKHYKDQIICEVIDMD
        C +++  G+  N++S  LV+ L+L+ ++ +P+   +    +R +    + C +P+SIG  YKD++ C V++M+
Subjt:  CDVIIDSGSCENVVSNALVEALRLE-IEPHPNPYKIGWIKKRNEVAITKICTIPLSIGKHYKDQIICEVIDMD


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGACAAGCAAGCTGGAACGAAAATCAAAGAACTCCTAATTAGGGTAGAGGAGGAAGAAGACCATCCGGTCGATTTGGATCTACTAATACAAAGGGAGAATTTA
AACAAGATAATCGGAATTGGGAAGAAAAGAATGAACCCTTCGAAGGAGGAGATGAGAAACCAAAAGCACCATCTAAGTGGACAGCCCACAATCGGCAAGAACTCA
ATCTCAAAGCAAGAAAATCCATATGCAAGACCTTCAAATTTAAAGAAATGTTATAGATGTGGTCAAACTGGCCATTTCTCCAATGAATGCTCCGAAAGAAAGAAG
CTTGCATTGATGGAAGAAGGCTCCGAACAAGAAGACAGCGGTGAAAAAGAGGAGAAATTTTCTAGAAATGAACAGGAAATCTTTGAAGAAGGAGATGATGGTGAG
TGGGTGTGTGATGTGATAATTGATAGTGGGAGTTGCGAAAATGTTGTGTCCAATGCTTTAGTTGAAGCTCTTAGATTGGAAATCGAACCTCATCCTAATCCTTAT
AAAATAGGATGGATCAAGAAAAGAAATGAAGTGGCTATCACAAAAATTTGCACAATTCCACTGTCCATTGGAAAACATTACAAAGATCAAATTATTTGCGAAGTT
ATAGACATGGATGCATGCCACATCTTGCTCAGAGACCTTGACAATTTGATCTTTCGACAATTCACAAAGGAAGGGAGAACACTTACGAATTTAATTGTCTTGGTA
AGAAAATCACCCTACTACCCAATAAGCAAAAAGAGGTAA
mRNA sequenceShow/hide mRNA sequence
ATGGACAAGCAAGCTGGAACGAAAATCAAAGAACTCCTAATTAGGGTAGAGGAGGAAGAAGACCATCCGGTCGATTTGGATCTACTAATACAAAGGGAGAATTTA
AACAAGATAATCGGAATTGGGAAGAAAAGAATGAACCCTTCGAAGGAGGAGATGAGAAACCAAAAGCACCATCTAAGTGGACAGCCCACAATCGGCAAGAACTCA
ATCTCAAAGCAAGAAAATCCATATGCAAGACCTTCAAATTTAAAGAAATGTTATAGATGTGGTCAAACTGGCCATTTCTCCAATGAATGCTCCGAAAGAAAGAAG
CTTGCATTGATGGAAGAAGGCTCCGAACAAGAAGACAGCGGTGAAAAAGAGGAGAAATTTTCTAGAAATGAACAGGAAATCTTTGAAGAAGGAGATGATGGTGAG
TGGGTGTGTGATGTGATAATTGATAGTGGGAGTTGCGAAAATGTTGTGTCCAATGCTTTAGTTGAAGCTCTTAGATTGGAAATCGAACCTCATCCTAATCCTTAT
AAAATAGGATGGATCAAGAAAAGAAATGAAGTGGCTATCACAAAAATTTGCACAATTCCACTGTCCATTGGAAAACATTACAAAGATCAAATTATTTGCGAAGTT
ATAGACATGGATGCATGCCACATCTTGCTCAGAGACCTTGACAATTTGATCTTTCGACAATTCACAAAGGAAGGGAGAACACTTACGAATTTAATTGTCTTGGTA
AGAAAATCACCCTACTACCCAATAAGCAAAAAGAGGTAA
Protein sequenceShow/hide protein sequence
MDKQAGTKIKELLIRVEEEEDHPVDLDLLIQRENLNKIIGIGKKRMNPSKEEMRNQKHHLSGQPTIGKNSISKQENPYARPSNLKKCYRCGQTGHFSNECSERKK
LALMEEGSEQEDSGEKEEKFSRNEQEIFEEGDDGEWVCDVIIDSGSCENVVSNALVEALRLEIEPHPNPYKIGWIKKRNEVAITKICTIPLSIGKHYKDQIICEV
IDMDACHILLRDLDNLIFRQFTKEGRTLTNLIVLVRKSPYYPISKKR