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Moc11g31260 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc11g31260
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionProtein Ycf2
Genome locationchr11:22847573..22850120
RNA-Seq ExpressionMoc11g31260
SyntenyMoc11g31260
Gene Ontology termsGO:0009507 - chloroplast (cellular component)
GO:0016020 - membrane (cellular component)
GO:0000166 - nucleotide binding (molecular function)
InterPro domainsIPR008543 - Uncharacterised protein family Ycf2


Homology Show/hide homology
GenBank top hitse value%identityAlignment
YP_009470701.1 ycf2 [Anemopaegma acutifolium]8.0e-1870.13Show/hide
Query:  YTTILNFESEERFQEMADLFTLSITELDLVYHKGFAFSIDSYGLDQKQFLNESACLYTKPSPTALPCIYSRPRSSKR
        YT   +FESEERFQEMADLFTLSITE DLVYHKGFAFSIDSYGLDQKQFLNE+     K S   LP I+     S+R
Subjt:  YTTILNFESEERFQEMADLFTLSITELDLVYHKGFAFSIDSYGLDQKQFLNESACLYTKPSPTALPCIYSRPRSSKR
YP_009470799.1 ycf2 [Anemopaegma album]8.0e-1870.13Show/hide
Query:  YTTILNFESEERFQEMADLFTLSITELDLVYHKGFAFSIDSYGLDQKQFLNESACLYTKPSPTALPCIYSRPRSSKR
        YT   +FESEERFQEMADLFTLSITE DLVYHKGFAFSIDSYGLDQKQFLNE+     K S   LP I+     S+R
Subjt:  YTTILNFESEERFQEMADLFTLSITELDLVYHKGFAFSIDSYGLDQKQFLNESACLYTKPSPTALPCIYSRPRSSKR
YP_009470995.1 ycf2 [Anemopaegma chamberlaynii]8.0e-1870.13Show/hide
Query:  YTTILNFESEERFQEMADLFTLSITELDLVYHKGFAFSIDSYGLDQKQFLNESACLYTKPSPTALPCIYSRPRSSKR
        YT   +FESEERFQEMADLFTLSITE DLVYHKGFAFSIDSYGLDQKQFLNE+     K S   LP I+     S+R
Subjt:  YTTILNFESEERFQEMADLFTLSITELDLVYHKGFAFSIDSYGLDQKQFLNESACLYTKPSPTALPCIYSRPRSSKR
YP_009471093.1 ycf2 [Anemopaegma foetidum]8.0e-1870.13Show/hide
Query:  YTTILNFESEERFQEMADLFTLSITELDLVYHKGFAFSIDSYGLDQKQFLNESACLYTKPSPTALPCIYSRPRSSKR
        YT   +FESEERFQEMADLFTLSITE DLVYHKGFAFSIDSYGLDQKQFLNE+     K S   LP I+     S+R
Subjt:  YTTILNFESEERFQEMADLFTLSITELDLVYHKGFAFSIDSYGLDQKQFLNESACLYTKPSPTALPCIYSRPRSSKR
YP_009661786.1 Ycf2 [Anemopaegma prostratum]8.0e-1870.13Show/hide
Query:  YTTILNFESEERFQEMADLFTLSITELDLVYHKGFAFSIDSYGLDQKQFLNESACLYTKPSPTALPCIYSRPRSSKR
        YT   +FESEERFQEMADLFTLSITE DLVYHKGFAFSIDSYGLDQKQFLNE+     K S   LP I+     S+R
Subjt:  YTTILNFESEERFQEMADLFTLSITELDLVYHKGFAFSIDSYGLDQKQFLNESACLYTKPSPTALPCIYSRPRSSKR
TrEMBL top hitse value%identityAlignment
A0A2L1ZR55 Protein Ycf23.9e-1870.13Show/hide
Query:  YTTILNFESEERFQEMADLFTLSITELDLVYHKGFAFSIDSYGLDQKQFLNESACLYTKPSPTALPCIYSRPRSSKR
        YT   +FESEERFQEMADLFTLSITE DLVYHKGFAFSIDSYGLDQKQFLNE+     K S   LP I+     S+R
Subjt:  YTTILNFESEERFQEMADLFTLSITELDLVYHKGFAFSIDSYGLDQKQFLNESACLYTKPSPTALPCIYSRPRSSKR
A0A2L1ZS00 Protein Ycf23.9e-1870.13Show/hide
Query:  YTTILNFESEERFQEMADLFTLSITELDLVYHKGFAFSIDSYGLDQKQFLNESACLYTKPSPTALPCIYSRPRSSKR
        YT   +FESEERFQEMADLFTLSITE DLVYHKGFAFSIDSYGLDQKQFLNE+     K S   LP I+     S+R
Subjt:  YTTILNFESEERFQEMADLFTLSITELDLVYHKGFAFSIDSYGLDQKQFLNESACLYTKPSPTALPCIYSRPRSSKR
A0A2L1ZS97 Protein Ycf23.9e-1870.13Show/hide
Query:  YTTILNFESEERFQEMADLFTLSITELDLVYHKGFAFSIDSYGLDQKQFLNESACLYTKPSPTALPCIYSRPRSSKR
        YT   +FESEERFQEMADLFTLSITE DLVYHKGFAFSIDSYGLDQKQFLNE+     K S   LP I+     S+R
Subjt:  YTTILNFESEERFQEMADLFTLSITELDLVYHKGFAFSIDSYGLDQKQFLNESACLYTKPSPTALPCIYSRPRSSKR
A0A2P1GC11 Protein Ycf23.9e-1870.13Show/hide
Query:  YTTILNFESEERFQEMADLFTLSITELDLVYHKGFAFSIDSYGLDQKQFLNESACLYTKPSPTALPCIYSRPRSSKR
        YT   +FESEERFQEMADLFTLSITE DLVYHKGFAFSIDSYGLDQKQFLNE+     K S   LP I+     S+R
Subjt:  YTTILNFESEERFQEMADLFTLSITELDLVYHKGFAFSIDSYGLDQKQFLNESACLYTKPSPTALPCIYSRPRSSKR
A0A4P9D017 Protein Ycf23.9e-1870.13Show/hide
Query:  YTTILNFESEERFQEMADLFTLSITELDLVYHKGFAFSIDSYGLDQKQFLNESACLYTKPSPTALPCIYSRPRSSKR
        YT   +FESEERFQEMADLFTLSITE DLVYHKGFAFSIDSYGLDQKQFLNE+     K S   LP I+     S+R
Subjt:  YTTILNFESEERFQEMADLFTLSITELDLVYHKGFAFSIDSYGLDQKQFLNESACLYTKPSPTALPCIYSRPRSSKR
SwissProt top hitse value%identityAlignment
P09976 Protein Ycf24.4e-1969.33Show/hide
Query:  YTTILNFESEERFQEMADLFTLSITELDLVYHKGFAFSIDSYGLDQKQFLNESACLYTKPSPTALPCIYSRPRSS
        YT   +FESEERFQEMADLFTLSITE DLVYHKGFAFSIDS GLDQKQFLNE+     K S   LP I+     S
Subjt:  YTTILNFESEERFQEMADLFTLSITELDLVYHKGFAFSIDSYGLDQKQFLNESACLYTKPSPTALPCIYSRPRSS
Q33BV3 Protein Ycf24.4e-1969.33Show/hide
Query:  YTTILNFESEERFQEMADLFTLSITELDLVYHKGFAFSIDSYGLDQKQFLNESACLYTKPSPTALPCIYSRPRSS
        YT   +FESEERFQEMADLFTLSITE DLVYHKGFAFSIDS GLDQKQFLNE+     K S   LP I+     S
Subjt:  YTTILNFESEERFQEMADLFTLSITELDLVYHKGFAFSIDSYGLDQKQFLNESACLYTKPSPTALPCIYSRPRSS
Q3C1N4 Protein Ycf24.4e-1969.33Show/hide
Query:  YTTILNFESEERFQEMADLFTLSITELDLVYHKGFAFSIDSYGLDQKQFLNESACLYTKPSPTALPCIYSRPRSS
        YT   +FESEERFQEMADLFTLSITE DLVYHKGFAFSIDS GLDQKQFLNE+     K S   LP I+     S
Subjt:  YTTILNFESEERFQEMADLFTLSITELDLVYHKGFAFSIDSYGLDQKQFLNESACLYTKPSPTALPCIYSRPRSS
Q8S8U1 Protein Ycf2 B4.4e-1969.33Show/hide
Query:  YTTILNFESEERFQEMADLFTLSITELDLVYHKGFAFSIDSYGLDQKQFLNESACLYTKPSPTALPCIYSRPRSS
        YT   +FESEERFQEMADLFTLSITE DLVYHKGFAFSIDS GLDQKQFLNE+     K S   LP I+     S
Subjt:  YTTILNFESEERFQEMADLFTLSITELDLVYHKGFAFSIDSYGLDQKQFLNESACLYTKPSPTALPCIYSRPRSS
Q8S8V2 Protein Ycf2 A4.4e-1969.33Show/hide
Query:  YTTILNFESEERFQEMADLFTLSITELDLVYHKGFAFSIDSYGLDQKQFLNESACLYTKPSPTALPCIYSRPRSS
        YT   +FESEERFQEMADLFTLSITE DLVYHKGFAFSIDS GLDQKQFLNE+     K S   LP I+     S
Subjt:  YTTILNFESEERFQEMADLFTLSITELDLVYHKGFAFSIDSYGLDQKQFLNESACLYTKPSPTALPCIYSRPRSS
Arabidopsis top hitse value%identityAlignment
ATCG00860.1 Chloroplast Ycf2;ATPase, AAA type, core8.5e-1889.58Show/hide
Query:  LNFESEERFQEMADLFTLSITELDLVYHKGFAFSIDSYGLDQKQFLNE
        L  ESEERFQEMADLFTLSITE DLVYHKGFAFSIDSYGLDQ+QFL E
Subjt:  LNFESEERFQEMADLFTLSITELDLVYHKGFAFSIDSYGLDQKQFLNE
ATCG01280.1 Chloroplast Ycf2;ATPase, AAA type, core8.5e-1889.58Show/hide
Query:  LNFESEERFQEMADLFTLSITELDLVYHKGFAFSIDSYGLDQKQFLNE
        L  ESEERFQEMADLFTLSITE DLVYHKGFAFSIDSYGLDQ+QFL E
Subjt:  LNFESEERFQEMADLFTLSITELDLVYHKGFAFSIDSYGLDQKQFLNE

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATCGGAACAGGAGGGGATACACGTTACACCACGATTTTGAATTTTGAATCAGAAGAGAGATTTCAAGAAATGGCAGATCTATTCACTCTATCAATAACCGAGCTGGA
TCTGGTGTATCATAAGGGATTTGCCTTTTCTATTGATTCCTACGGATTGGATCAAAAACAATTCTTGAATGAGTCGGCCTGCCTCTACACTAAGCCAAGCCCCACGGCTC
TACCTTGCATTTACTCTAGGCCAAGGTCTTCTAAACGCGATGTTGCAACTCATTTCAAACCATCTTGGTTCTCGGCCACTCGGCCGTCCGGCTCCTACGATGAGCCAATA
TCTTACCAGGATGAGTTCGGACCTATAGCGGGCTTATCGAGCCCGTCAGACGCCTCTAAGACCATTCTTGCAGAGAAGCTAGTTAATGAGGGGCTAAACGGCCTTACTGA
GTACTTCCGGGATGATTCCTGCCGGGATCCAGACAAGGAATGA
mRNA sequenceShow/hide mRNA sequence
ATGATCGGAACAGGAGGGGATACACGTTACACCACGATTTTGAATTTTGAATCAGAAGAGAGATTTCAAGAAATGGCAGATCTATTCACTCTATCAATAACCGAGCTGGA
TCTGGTGTATCATAAGGGATTTGCCTTTTCTATTGATTCCTACGGATTGGATCAAAAACAATTCTTGAATGAGTCGGCCTGCCTCTACACTAAGCCAAGCCCCACGGCTC
TACCTTGCATTTACTCTAGGCCAAGGTCTTCTAAACGCGATGTTGCAACTCATTTCAAACCATCTTGGTTCTCGGCCACTCGGCCGTCCGGCTCCTACGATGAGCCAATA
TCTTACCAGGATGAGTTCGGACCTATAGCGGGCTTATCGAGCCCGTCAGACGCCTCTAAGACCATTCTTGCAGAGAAGCTAGTTAATGAGGGGCTAAACGGCCTTACTGA
GTACTTCCGGGATGATTCCTGCCGGGATCCAGACAAGGAATGA
Protein sequenceShow/hide protein sequence
MIGTGGDTRYTTILNFESEERFQEMADLFTLSITELDLVYHKGFAFSIDSYGLDQKQFLNESACLYTKPSPTALPCIYSRPRSSKRDVATHFKPSWFSATRPSGSYDEPI
SYQDEFGPIAGLSSPSDASKTILAEKLVNEGLNGLTEYFRDDSCRDPDKE