; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Moc11g32060 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc11g32060
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionRrna intron-encoded homing endonuclease
Genome locationchr11:23391406..23391804
RNA-Seq ExpressionMoc11g32060
SyntenyMoc11g32060
Gene Ontology termsGO:0090305 - nucleic acid phosphodiester bond hydrolysis (biological process)
GO:0004519 - endonuclease activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0050485.1 rrna intron-encoded homing endonuclease [Cucumis melo var. makuwa]1.4e-0982.05Show/hide
Query:  VDPANHRVFERKLRPEPSGRGHVCLGVTHRCPPPLATPL
        VDPANHRVFE KLRPEPSGRGHVCLGVTHRCP     P+
Subjt:  VDPANHRVFERKLRPEPSGRGHVCLGVTHRCPPPLATPL

KAF7807874.1 hypothetical protein G2W53_040035 [Senna tora]2.6e-1151.16Show/hide
Query:  PPSGAH-------GPKQNPGAGRAKELQRICPPRAPVSACGGRSI--PVDPANHRVFERKLRPEPSGRGHVCLGVTHRCPPPLATP
        PP GA         P +NPGAG AKE++  C     V++   R      +P NHRVFERKLRP+P GRGHVCLGVTHR P P   P
Subjt:  PPSGAH-------GPKQNPGAGRAKELQRICPPRAPVSACGGRSI--PVDPANHRVFERKLRPEPSGRGHVCLGVTHRCPPPLATP

KAG2411222.1 hypothetical protein I3760_Q020200 [Carya illinoinensis]1.0e-1068.63Show/hide
Query:  DPANHRVFERKLRPEPSGRGHVCLGVTHRCPPPLATPLLVAVGGGTRWPPV
        +PANHRVFERKLRP+P GRGHVCLGVTHRCP P  +      G G  WPPV
Subjt:  DPANHRVFERKLRPEPSGRGHVCLGVTHRCPPPLATPLLVAVGGGTRWPPV

KAG2411239.1 hypothetical protein I3760_Q018500 [Carya illinoinensis]8.5e-1066.67Show/hide
Query:  DPANHRVFERKLRPEPSGRGHVCLGVTHRCPPPLATPLLVAVGGGTRWPPV
        +PANHRVFERKLRP+P GRGHVCLGVTHRCP   +  +    G G  WPPV
Subjt:  DPANHRVFERKLRPEPSGRGHVCLGVTHRCPPPLATPLLVAVGGGTRWPPV

TKY68242.1 hypothetical protein E2542_SST04477 [Spatholobus suberectus]1.0e-1049.44Show/hide
Query:  NPGAGRAKELQRI-CPPRAPVSACGGRSIPVDPANHRVFERKLRPEPSGRGHVCLGVTHRCPPPLATPLLVAVGGGTRWPPVRTVARMA
        NPGA  AKE + + C P  P +      +  +P NHRVFERKLRP+P GRGH CLGVTHRCPP         V  G  W P   V+R+A
Subjt:  NPGAGRAKELQRI-CPPRAPVSACGGRSIPVDPANHRVFERKLRPEPSGRGHVCLGVTHRCPPPLATPLLVAVGGGTRWPPVRTVARMA

TrEMBL top hitse value%identityAlignment
A0A2N9IL11 Uncharacterized protein8.8e-1353.33Show/hide
Query:  KQNPGAGRAKELQRICPPRAPVSACGGRSIPVDPANHRVFERKLRPEPSGRGHVCLGVTHRCP--PPLATPLLVAVGGGTRWPPVRTVAR
        K NPGA  AKEL+          +  GR    +P NHRVFERKLRP P GRGHVCLGVTHRCP  PP      ++ GGG+ WPPV   +R
Subjt:  KQNPGAGRAKELQRICPPRAPVSACGGRSIPVDPANHRVFERKLRPEPSGRGHVCLGVTHRCP--PPLATPLLVAVGGGTRWPPVRTVAR

A0A2Z6SHB0 Uncharacterized protein5.9e-0960.78Show/hide
Query:  DPANHRVFERKLRPEPSGRGHVCLGVTHRCPPPLATPLLVAVGGGTRWPPV
        +P NHRVFERKLRP+P G GHVCLGVTHR  P   +P  + +  G  WPPV
Subjt:  DPANHRVFERKLRPEPSGRGHVCLGVTHRCPPPLATPLLVAVGGGTRWPPV

A0A5A7UA72 Rrna intron-encoded homing endonuclease7.0e-1082.05Show/hide
Query:  VDPANHRVFERKLRPEPSGRGHVCLGVTHRCPPPLATPL
        VDPANHRVFE KLRPEPSGRGHVCLGVTHRCP     P+
Subjt:  VDPANHRVFERKLRPEPSGRGHVCLGVTHRCPPPLATPL

A0A6A5L2L0 Uncharacterized protein4.5e-0974.36Show/hide
Query:  DPANHRVFERKLRPEPSGRGHVCLGVTHRCPPPLATPLL
        +P NHRVFERKLRP+P GRGH CLGV HRCP  LATP++
Subjt:  DPANHRVFERKLRPEPSGRGHVCLGVTHRCPPPLATPLL

M1D9E9 Uncharacterized protein5.9e-0963.46Show/hide
Query:  DPANHRVFERKLRPEPSGRGHVCLGVTHRCPPPLATPLLVAVGGGTRWPPVR
        +P NHRVFERKLRP+P GRGHVCLGVTHR  P         + GG  WPPVR
Subjt:  DPANHRVFERKLRPEPSGRGHVCLGVTHRCPPPLATPLLVAVGGGTRWPPVR

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCCGCCCTCCGGCGCGCACGGACCCAAACAAAACCCCGGCGCAGGTCGCGCCAAGGAACTCCAACGAATTTGCCCGCCCCGCGCCCCGGTCTCGGCGTGCGGGGGGCG
GAGCATTCCTGTCGATCCCGCGAACCACCGAGTCTTTGAACGCAAGTTGCGCCCGGAGCCATCTGGCCGAGGGCACGTCTGCCTGGGCGTCACGCATCGCTGCCCCCCCC
CCCTCGCAACCCCTTTGTTGGTTGCTGTGGGCGGGGGCACACGCTGGCCTCCCGTGCGCACCGTCGCGCGGATGGCTTAA
mRNA sequenceShow/hide mRNA sequence
ATGCCGCCCTCCGGCGCGCACGGACCCAAACAAAACCCCGGCGCAGGTCGCGCCAAGGAACTCCAACGAATTTGCCCGCCCCGCGCCCCGGTCTCGGCGTGCGGGGGGCG
GAGCATTCCTGTCGATCCCGCGAACCACCGAGTCTTTGAACGCAAGTTGCGCCCGGAGCCATCTGGCCGAGGGCACGTCTGCCTGGGCGTCACGCATCGCTGCCCCCCCC
CCCTCGCAACCCCTTTGTTGGTTGCTGTGGGCGGGGGCACACGCTGGCCTCCCGTGCGCACCGTCGCGCGGATGGCTTAA
Protein sequenceShow/hide protein sequence
MPPSGAHGPKQNPGAGRAKELQRICPPRAPVSACGGRSIPVDPANHRVFERKLRPEPSGRGHVCLGVTHRCPPPLATPLLVAVGGGTRWPPVRTVARMA