CuGenDBv2

Gene ID	Moctig00181g070
Organism	Momordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
Description	Nuclear factor of activated T-cells 5 isoform X1
Genome location	tig00000181_pilon:59371..61011
RNA-Seq Expression	Moctig00181g070
Synteny	Moctig00181g070
Gene Ontology terms	GO:0006396 - RNA processing (biological process)
InterPro domains	NA

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAA0057094.1 nuclear factor of activated T-cells 5 isoform X1 [Cucumis melo var. makuwa]

1.2e-73

55.45

Show/hide

Query:  MSSESVSDTDEGALMHNPLGIRSSGSIRISNEVASPSSSPSHDKHIHTQEPSRFHMRGAENRKWHHKRNAGNFHRESQHHFPGHSRRRPHRTWQGSPQDY
        +SSESV++TDE  +MHNPL + SSGSI+ISNEV SPSSSPS DK  HTQ  S+FHM    +RKWHHKR AGN   + QHHF GHSRRRPHRTW+ SPQDY
Subjt:  MSSESVSDTDEGALMHNPLGIRSSGSIRISNEVASPSSSPSHDKHIHTQEPSRFHMRGAENRKWHHKRNAGNFHRESQHHFPGHSRRRPHRTWQGSPQDY

Query:  QGTKSGQAPDGQDYTSDSIASQKPQIERSSQEHNQIQSAQQQNFPTTSQSQLPSQGFTQEKSQYLTPNDEQYGHWQSGQAPHTYEQI-------------
        +G +SGQ P  QDYTS+SIASQKPQ+ER SQ++N IQS QQQNF TTSQSQLPSQGFTQEKSQY T NDEQYGH QSGQAP+TYEQ+             
Subjt:  QGTKSGQAPDGQDYTSDSIASQKPQIERSSQEHNQIQSAQQQNFPTTSQSQLPSQGFTQEKSQYLTPNDEQYGHWQSGQAPHTYEQI-------------

Query:  --------------------------------------------------------------LQPQAVSQTEQQLFQQHEHQPEELEEEEQKPHMKQISS
                                                                      LQPQ  SQT+Q  FQQHEHQPEELEE EQK H KQ+SS
Subjt:  --------------------------------------------------------------LQPQAVSQTEQQLFQQHEHQPEELEEEEQKPHMKQISS

Query:  LSIQMHTGGHDH
        LSIQ+  G  DH
Subjt:  LSIQMHTGGHDH

XP_008443864.1 PREDICTED: uncharacterized protein LOC103487357 isoform X1 [Cucumis melo]

1.2e-73

55.45

Show/hide

Query:  MSSESVSDTDEGALMHNPLGIRSSGSIRISNEVASPSSSPSHDKHIHTQEPSRFHMRGAENRKWHHKRNAGNFHRESQHHFPGHSRRRPHRTWQGSPQDY
        +SSESV++TDE  +MHNPL + SSGSI+ISNEV SPSSSPS DK  HTQ  S+FHM    +RKWHHKR AGN   + QHHF GHSRRRPHRTW+ SPQDY
Subjt:  MSSESVSDTDEGALMHNPLGIRSSGSIRISNEVASPSSSPSHDKHIHTQEPSRFHMRGAENRKWHHKRNAGNFHRESQHHFPGHSRRRPHRTWQGSPQDY

Query:  QGTKSGQAPDGQDYTSDSIASQKPQIERSSQEHNQIQSAQQQNFPTTSQSQLPSQGFTQEKSQYLTPNDEQYGHWQSGQAPHTYEQI-------------
        +G +SGQ P  QDYTS+SIASQKPQ+ER SQ++N IQS QQQNF TTSQSQLPSQGFTQEKSQY T NDEQYGH QSGQAP+TYEQ+             
Subjt:  QGTKSGQAPDGQDYTSDSIASQKPQIERSSQEHNQIQSAQQQNFPTTSQSQLPSQGFTQEKSQYLTPNDEQYGHWQSGQAPHTYEQI-------------

Query:  --------------------------------------------------------------LQPQAVSQTEQQLFQQHEHQPEELEEEEQKPHMKQISS
                                                                      LQPQ  SQT+Q  FQQHEHQPEELEE EQK H KQ+SS
Subjt:  --------------------------------------------------------------LQPQAVSQTEQQLFQQHEHQPEELEEEEQKPHMKQISS

Query:  LSIQMHTGGHDH
        LSIQ+  G  DH
Subjt:  LSIQMHTGGHDH

XP_008443873.1 PREDICTED: uncharacterized protein LOC103487357 isoform X2 [Cucumis melo]

1.4e-74

55.56

Show/hide

Query:  MSSESVSDTDEGALMHNPLGIRSSGSIRISNEVASPSSSPSHDKHIHTQEPSRFHMRGAENRKWHHKRNAGNFHRESQHHFPGHSRRRPHRTWQGSPQDY
        +SSESV++TDE  +MHNPL + SSGSI+ISNEV SPSSSPS DK  HTQ  S+FHM    +RKWHHKR AGN   + QHHF GHSRRRPHRTW+ SPQDY
Subjt:  MSSESVSDTDEGALMHNPLGIRSSGSIRISNEVASPSSSPSHDKHIHTQEPSRFHMRGAENRKWHHKRNAGNFHRESQHHFPGHSRRRPHRTWQGSPQDY

Query:  QGTKSGQAPDGQDYTSDSIASQKPQIERSSQEHNQIQSAQQQNFPTTSQSQLPSQGFTQEKSQYLTPNDEQYGHWQSGQAPHTYEQI-------------
        +G +SGQ P  QDYTS+SIASQKPQ+ER SQ++N IQS QQQNF TTSQSQLPSQGFTQEKSQY T NDEQYGH QSGQAP+TYEQ+             
Subjt:  QGTKSGQAPDGQDYTSDSIASQKPQIERSSQEHNQIQSAQQQNFPTTSQSQLPSQGFTQEKSQYLTPNDEQYGHWQSGQAPHTYEQI-------------

Query:  --------------------------------------------------------------LQPQAVSQTEQQLFQQHEHQPEELEEEEQKPHMKQISS
                                                                      LQPQ  SQT+Q  FQQHEHQPEELEE EQK H KQ+SS
Subjt:  --------------------------------------------------------------LQPQAVSQTEQQLFQQHEHQPEELEEEEQKPHMKQISS

Query:  LSIQMHTGGHDHLDS
        LSIQ+  G  DH DS
Subjt:  LSIQMHTGGHDHLDS

XP_008443890.1 PREDICTED: uncharacterized protein LOC103487357 isoform X3 [Cucumis melo]

1.2e-73

55.45

Show/hide

Query:  MSSESVSDTDEGALMHNPLGIRSSGSIRISNEVASPSSSPSHDKHIHTQEPSRFHMRGAENRKWHHKRNAGNFHRESQHHFPGHSRRRPHRTWQGSPQDY
        +SSESV++TDE  +MHNPL + SSGSI+ISNEV SPSSSPS DK  HTQ  S+FHM    +RKWHHKR AGN   + QHHF GHSRRRPHRTW+ SPQDY
Subjt:  MSSESVSDTDEGALMHNPLGIRSSGSIRISNEVASPSSSPSHDKHIHTQEPSRFHMRGAENRKWHHKRNAGNFHRESQHHFPGHSRRRPHRTWQGSPQDY

Query:  QGTKSGQAPDGQDYTSDSIASQKPQIERSSQEHNQIQSAQQQNFPTTSQSQLPSQGFTQEKSQYLTPNDEQYGHWQSGQAPHTYEQI-------------
        +G +SGQ P  QDYTS+SIASQKPQ+ER SQ++N IQS QQQNF TTSQSQLPSQGFTQEKSQY T NDEQYGH QSGQAP+TYEQ+             
Subjt:  QGTKSGQAPDGQDYTSDSIASQKPQIERSSQEHNQIQSAQQQNFPTTSQSQLPSQGFTQEKSQYLTPNDEQYGHWQSGQAPHTYEQI-------------

Query:  --------------------------------------------------------------LQPQAVSQTEQQLFQQHEHQPEELEEEEQKPHMKQISS
                                                                      LQPQ  SQT+Q  FQQHEHQPEELEE EQK H KQ+SS
Subjt:  --------------------------------------------------------------LQPQAVSQTEQQLFQQHEHQPEELEEEEQKPHMKQISS

Query:  LSIQMHTGGHDH
        LSIQ+  G  DH
Subjt:  LSIQMHTGGHDH

XP_022139949.1 uncharacterized protein LOC111010737 [Momordica charantia]

1.5e-116

75.63

Show/hide

Query:  MSSESVSDTDEGALMHNPLGIRSSGSIRISNEVASPSSSPSHDKHIHTQEPSRFHMRGAENRKWHHKRNAGNFHRESQHHFPGHSRRRPHRTWQGSPQDY
        MSSESVSDTDEGALMHNPLGIRSSGSIRISNEVASPSSSPSHDKHIHTQEPSRFHMRGAENRKWHHKRNAGNFHRESQHHFPGHSRRRPHRTWQGSPQDY
Subjt:  MSSESVSDTDEGALMHNPLGIRSSGSIRISNEVASPSSSPSHDKHIHTQEPSRFHMRGAENRKWHHKRNAGNFHRESQHHFPGHSRRRPHRTWQGSPQDY

Query:  QGTKSGQAPDGQDYTSDSIASQKPQIERSSQEHNQIQSAQQQNFPTTSQSQLPSQGFTQEKSQYLTPNDEQYGHWQSGQAPHTYEQI-------------
        QGTKSGQAPDGQDYTSDSIASQKPQIERSSQEHNQIQSAQQQNFPTTSQSQLPSQGFTQEKSQYLTPNDEQYGHWQSGQAPHTYEQ+             
Subjt:  QGTKSGQAPDGQDYTSDSIASQKPQIERSSQEHNQIQSAQQQNFPTTSQSQLPSQGFTQEKSQYLTPNDEQYGHWQSGQAPHTYEQI-------------

Query:  ---------------------------------------------------------------LQPQAVSQTEQQLFQQHEHQPEELEEEEQKPHMKQIS
                                                                       LQPQAVSQTEQQLFQQHEHQPEELEEEEQKPHMKQIS
Subjt:  ---------------------------------------------------------------LQPQAVSQTEQQLFQQHEHQPEELEEEEQKPHMKQIS

Query:  SLSIQMHTGGHDHLDS
        SLSIQMHTGGHDHLDS
Subjt:  SLSIQMHTGGHDHLDS

TrEMBL top hits

e value

%identity

Alignment

A0A1S3B905 uncharacterized protein LOC103487357 isoform X1

5.7e-74

55.45

Show/hide

Query:  MSSESVSDTDEGALMHNPLGIRSSGSIRISNEVASPSSSPSHDKHIHTQEPSRFHMRGAENRKWHHKRNAGNFHRESQHHFPGHSRRRPHRTWQGSPQDY
        +SSESV++TDE  +MHNPL + SSGSI+ISNEV SPSSSPS DK  HTQ  S+FHM    +RKWHHKR AGN   + QHHF GHSRRRPHRTW+ SPQDY
Subjt:  MSSESVSDTDEGALMHNPLGIRSSGSIRISNEVASPSSSPSHDKHIHTQEPSRFHMRGAENRKWHHKRNAGNFHRESQHHFPGHSRRRPHRTWQGSPQDY

Query:  QGTKSGQAPDGQDYTSDSIASQKPQIERSSQEHNQIQSAQQQNFPTTSQSQLPSQGFTQEKSQYLTPNDEQYGHWQSGQAPHTYEQI-------------
        +G +SGQ P  QDYTS+SIASQKPQ+ER SQ++N IQS QQQNF TTSQSQLPSQGFTQEKSQY T NDEQYGH QSGQAP+TYEQ+             
Subjt:  QGTKSGQAPDGQDYTSDSIASQKPQIERSSQEHNQIQSAQQQNFPTTSQSQLPSQGFTQEKSQYLTPNDEQYGHWQSGQAPHTYEQI-------------

Query:  --------------------------------------------------------------LQPQAVSQTEQQLFQQHEHQPEELEEEEQKPHMKQISS
                                                                      LQPQ  SQT+Q  FQQHEHQPEELEE EQK H KQ+SS
Subjt:  --------------------------------------------------------------LQPQAVSQTEQQLFQQHEHQPEELEEEEQKPHMKQISS

Query:  LSIQMHTGGHDH
        LSIQ+  G  DH
Subjt:  LSIQMHTGGHDH

A0A1S3B928 uncharacterized protein LOC103487357 isoform X3

5.7e-74

55.45

Show/hide

Query:  MSSESVSDTDEGALMHNPLGIRSSGSIRISNEVASPSSSPSHDKHIHTQEPSRFHMRGAENRKWHHKRNAGNFHRESQHHFPGHSRRRPHRTWQGSPQDY
        +SSESV++TDE  +MHNPL + SSGSI+ISNEV SPSSSPS DK  HTQ  S+FHM    +RKWHHKR AGN   + QHHF GHSRRRPHRTW+ SPQDY
Subjt:  MSSESVSDTDEGALMHNPLGIRSSGSIRISNEVASPSSSPSHDKHIHTQEPSRFHMRGAENRKWHHKRNAGNFHRESQHHFPGHSRRRPHRTWQGSPQDY

Query:  QGTKSGQAPDGQDYTSDSIASQKPQIERSSQEHNQIQSAQQQNFPTTSQSQLPSQGFTQEKSQYLTPNDEQYGHWQSGQAPHTYEQI-------------
        +G +SGQ P  QDYTS+SIASQKPQ+ER SQ++N IQS QQQNF TTSQSQLPSQGFTQEKSQY T NDEQYGH QSGQAP+TYEQ+             
Subjt:  QGTKSGQAPDGQDYTSDSIASQKPQIERSSQEHNQIQSAQQQNFPTTSQSQLPSQGFTQEKSQYLTPNDEQYGHWQSGQAPHTYEQI-------------

Query:  --------------------------------------------------------------LQPQAVSQTEQQLFQQHEHQPEELEEEEQKPHMKQISS
                                                                      LQPQ  SQT+Q  FQQHEHQPEELEE EQK H KQ+SS
Subjt:  --------------------------------------------------------------LQPQAVSQTEQQLFQQHEHQPEELEEEEQKPHMKQISS

Query:  LSIQMHTGGHDH
        LSIQ+  G  DH
Subjt:  LSIQMHTGGHDH

A0A1S3B9U5 uncharacterized protein LOC103487357 isoform X2

6.8e-75

55.56

Show/hide

Query:  MSSESVSDTDEGALMHNPLGIRSSGSIRISNEVASPSSSPSHDKHIHTQEPSRFHMRGAENRKWHHKRNAGNFHRESQHHFPGHSRRRPHRTWQGSPQDY
        +SSESV++TDE  +MHNPL + SSGSI+ISNEV SPSSSPS DK  HTQ  S+FHM    +RKWHHKR AGN   + QHHF GHSRRRPHRTW+ SPQDY
Subjt:  MSSESVSDTDEGALMHNPLGIRSSGSIRISNEVASPSSSPSHDKHIHTQEPSRFHMRGAENRKWHHKRNAGNFHRESQHHFPGHSRRRPHRTWQGSPQDY

Query:  QGTKSGQAPDGQDYTSDSIASQKPQIERSSQEHNQIQSAQQQNFPTTSQSQLPSQGFTQEKSQYLTPNDEQYGHWQSGQAPHTYEQI-------------
        +G +SGQ P  QDYTS+SIASQKPQ+ER SQ++N IQS QQQNF TTSQSQLPSQGFTQEKSQY T NDEQYGH QSGQAP+TYEQ+             
Subjt:  QGTKSGQAPDGQDYTSDSIASQKPQIERSSQEHNQIQSAQQQNFPTTSQSQLPSQGFTQEKSQYLTPNDEQYGHWQSGQAPHTYEQI-------------

Query:  --------------------------------------------------------------LQPQAVSQTEQQLFQQHEHQPEELEEEEQKPHMKQISS
                                                                      LQPQ  SQT+Q  FQQHEHQPEELEE EQK H KQ+SS
Subjt:  --------------------------------------------------------------LQPQAVSQTEQQLFQQHEHQPEELEEEEQKPHMKQISS

Query:  LSIQMHTGGHDHLDS
        LSIQ+  G  DH DS
Subjt:  LSIQMHTGGHDHLDS

A0A5D3DAZ3 Nuclear factor of activated T-cells 5 isoform X1

5.7e-74

55.45

Show/hide

Query:  MSSESVSDTDEGALMHNPLGIRSSGSIRISNEVASPSSSPSHDKHIHTQEPSRFHMRGAENRKWHHKRNAGNFHRESQHHFPGHSRRRPHRTWQGSPQDY
        +SSESV++TDE  +MHNPL + SSGSI+ISNEV SPSSSPS DK  HTQ  S+FHM    +RKWHHKR AGN   + QHHF GHSRRRPHRTW+ SPQDY
Subjt:  MSSESVSDTDEGALMHNPLGIRSSGSIRISNEVASPSSSPSHDKHIHTQEPSRFHMRGAENRKWHHKRNAGNFHRESQHHFPGHSRRRPHRTWQGSPQDY

Query:  QGTKSGQAPDGQDYTSDSIASQKPQIERSSQEHNQIQSAQQQNFPTTSQSQLPSQGFTQEKSQYLTPNDEQYGHWQSGQAPHTYEQI-------------
        +G +SGQ P  QDYTS+SIASQKPQ+ER SQ++N IQS QQQNF TTSQSQLPSQGFTQEKSQY T NDEQYGH QSGQAP+TYEQ+             
Subjt:  QGTKSGQAPDGQDYTSDSIASQKPQIERSSQEHNQIQSAQQQNFPTTSQSQLPSQGFTQEKSQYLTPNDEQYGHWQSGQAPHTYEQI-------------

Query:  --------------------------------------------------------------LQPQAVSQTEQQLFQQHEHQPEELEEEEQKPHMKQISS
                                                                      LQPQ  SQT+Q  FQQHEHQPEELEE EQK H KQ+SS
Subjt:  --------------------------------------------------------------LQPQAVSQTEQQLFQQHEHQPEELEEEEQKPHMKQISS

Query:  LSIQMHTGGHDH
        LSIQ+  G  DH
Subjt:  LSIQMHTGGHDH

A0A6J1CDP7 uncharacterized protein LOC111010737

7.1e-117

75.63

Show/hide

Query:  MSSESVSDTDEGALMHNPLGIRSSGSIRISNEVASPSSSPSHDKHIHTQEPSRFHMRGAENRKWHHKRNAGNFHRESQHHFPGHSRRRPHRTWQGSPQDY
        MSSESVSDTDEGALMHNPLGIRSSGSIRISNEVASPSSSPSHDKHIHTQEPSRFHMRGAENRKWHHKRNAGNFHRESQHHFPGHSRRRPHRTWQGSPQDY
Subjt:  MSSESVSDTDEGALMHNPLGIRSSGSIRISNEVASPSSSPSHDKHIHTQEPSRFHMRGAENRKWHHKRNAGNFHRESQHHFPGHSRRRPHRTWQGSPQDY

Query:  QGTKSGQAPDGQDYTSDSIASQKPQIERSSQEHNQIQSAQQQNFPTTSQSQLPSQGFTQEKSQYLTPNDEQYGHWQSGQAPHTYEQI-------------
        QGTKSGQAPDGQDYTSDSIASQKPQIERSSQEHNQIQSAQQQNFPTTSQSQLPSQGFTQEKSQYLTPNDEQYGHWQSGQAPHTYEQ+             
Subjt:  QGTKSGQAPDGQDYTSDSIASQKPQIERSSQEHNQIQSAQQQNFPTTSQSQLPSQGFTQEKSQYLTPNDEQYGHWQSGQAPHTYEQI-------------

Query:  ---------------------------------------------------------------LQPQAVSQTEQQLFQQHEHQPEELEEEEQKPHMKQIS
                                                                       LQPQAVSQTEQQLFQQHEHQPEELEEEEQKPHMKQIS
Subjt:  ---------------------------------------------------------------LQPQAVSQTEQQLFQQHEHQPEELEEEEQKPHMKQIS

Query:  SLSIQMHTGGHDHLDS
        SLSIQMHTGGHDHLDS
Subjt:  SLSIQMHTGGHDHLDS

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits	e value	%identity	Alignment
No hits found

Sequences

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CDS sequence

Show/hide CDS sequence

ATGTCTAGTGAAAGTGTCAGCGATACAGATGAAGGGGCTTTGATGCACAACCCACTGGGTATCAGATCTTCCGGTTCCATCCGGATTTCTAATGAAGTGGCTAGTCCATC
ATCGTCTCCGAGTCATGATAAACATATACACACCCAAGAACCTTCACGGTTTCACATGCGTGGAGCTGAAAATAGGAAATGGCACCATAAACGTAATGCTGGTAACTTCC
ATCGTGAATCCCAACACCATTTTCCGGGACATTCACGAAGAAGGCCTCATCGAACGTGGCAAGGTTCTCCTCAAGACTACCAAGGAACTAAATCTGGTCAAGCACCAGAT
GGTCAAGATTATACTTCTGATTCTATTGCTTCACAAAAACCACAAATTGAACGAAGCAGCCAAGAACACAATCAGATTCAATCTGCACAGCAGCAGAACTTCCCCACTAC
TTCTCAGTCTCAACTTCCTTCTCAAGGTTTTACTCAAGAGAAGTCTCAATATCTTACCCCAAATGACGAGCAATATGGTCATTGGCAGAGTGGTCAAGCCCCACATACCT
ATGAACAGATCCTCCAGCCGCAAGCAGTCTCCCAGACAGAGCAGCAATTATTTCAACAACATGAGCATCAGCCAGAAGAACTGGAGGAAGAAGAACAAAAGCCACACATG
AAGCAGATTTCTTCGTTGTCCATTCAGATGCACACTGGTGGCCATGATCATCTGGATTCTTGA

mRNA sequence

Show/hide mRNA sequence

Protein sequence

Show/hide protein sequence

MSSESVSDTDEGALMHNPLGIRSSGSIRISNEVASPSSSPSHDKHIHTQEPSRFHMRGAENRKWHHKRNAGNFHRESQHHFPGHSRRRPHRTWQGSPQDYQGTKSGQAPD
GQDYTSDSIASQKPQIERSSQEHNQIQSAQQQNFPTTSQSQLPSQGFTQEKSQYLTPNDEQYGHWQSGQAPHTYEQILQPQAVSQTEQQLFQQHEHQPEELEEEEQKPHM
KQISSLSIQMHTGGHDHLDS

Moctig00181g070 (gene) of Bitter gourd (OHB3-1) v2 genome