; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Moctig00183g030 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoctig00183g030
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionDown syndrome critical region protein 3 homolog isoform X1
Genome locationtig00000183_pilon:17473..19043
RNA-Seq ExpressionMoctig00183g030
SyntenyMoctig00183g030
Gene Ontology termsGO:0006886 - intracellular protein transport (biological process)
GO:0042147 - retrograde transport, endosome to Golgi (biological process)
GO:0048768 - root hair cell tip growth (biological process)
GO:0005829 - cytosol (cellular component)
GO:0010008 - endosome membrane (cellular component)
GO:0030904 - retromer complex (cellular component)
InterPro domainsIPR014752 - Arrestin-like, C-terminal
IPR028934 - Vacuolar protein sorting protein 26 related


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7019907.1 Down syndrome critical region protein 3 [Cucurbita argyrosperma subsp. argyrosperma]9.8e-8094.48Show/hide
Query:  MVIFYITQDTQRHPLLPELKSGGFRVTGKMSTLCSLSDPITGELTVEASAVPINSIDIHLCRVESVILGERIITETSVIQSTQIADGDVCRNITLPIYVI
        MVIFYITQDTQRHPLLPELKSGGFRVTGKM+TLCSLSDPITGELTVEASAVPI+SIDIHLCRVESVILGERIITETSVIQ+TQIADGDVCRNITLPIY I
Subjt:  MVIFYITQDTQRHPLLPELKSGGFRVTGKMSTLCSLSDPITGELTVEASAVPINSIDIHLCRVESVILGERIITETSVIQSTQIADGDVCRNITLPIYVI

Query:  PPRLLTCPTVFAGPFSIEFKVYIVITFQSALSKLHSKTDPRTPRLWLAIESLPLELVRSRSDD
         PRLLTCPTVFAGPFSIEFKVYIVITFQS LSKLH KTDPRTPRLWLAIESLPLEL+R RSDD
Subjt:  PPRLLTCPTVFAGPFSIEFKVYIVITFQSALSKLHSKTDPRTPRLWLAIESLPLELVRSRSDD

XP_004137506.1 vacuolar protein sorting-associated protein 26C [Cucumis sativus]3.7e-7993.25Show/hide
Query:  MVIFYITQDTQRHPLLPELKSGGFRVTGKMSTLCSLSDPITGELTVEASAVPINSIDIHLCRVESVILGERIITETSVIQSTQIADGDVCRNITLPIYVI
        MVIFYITQDTQRHPLLPEL+SGGFRVTGKMSTLCSLSDP+TGEL VE SAVPINSIDIHLCRVESVILGERIITETSVIQ+TQIADGDVCRNITLPIYVI
Subjt:  MVIFYITQDTQRHPLLPELKSGGFRVTGKMSTLCSLSDPITGELTVEASAVPINSIDIHLCRVESVILGERIITETSVIQSTQIADGDVCRNITLPIYVI

Query:  PPRLLTCPTVFAGPFSIEFKVYIVITFQSALSKLHSKTDPRTPRLWLAIESLPLELVRSRSDD
         PRLLTCPTVFAGPFSIEFKVYIVITFQS LSKLH KTDPRTPRLWLAIESLP+EL+R RSDD
Subjt:  PPRLLTCPTVFAGPFSIEFKVYIVITFQSALSKLHSKTDPRTPRLWLAIESLPLELVRSRSDD

XP_008464938.1 PREDICTED: Down syndrome critical region protein 3 homolog isoform X1 [Cucumis melo]1.8e-7893.25Show/hide
Query:  MVIFYITQDTQRHPLLPELKSGGFRVTGKMSTLCSLSDPITGELTVEASAVPINSIDIHLCRVESVILGERIITETSVIQSTQIADGDVCRNITLPIYVI
        MVIFYITQDTQRHPLLPEL+SGGFRVTGKMSTLCSLSDPITGEL VE SAV INSIDIHLCRVESVILGERIITETSVIQ+TQIADGDVCRNITLPIYVI
Subjt:  MVIFYITQDTQRHPLLPELKSGGFRVTGKMSTLCSLSDPITGELTVEASAVPINSIDIHLCRVESVILGERIITETSVIQSTQIADGDVCRNITLPIYVI

Query:  PPRLLTCPTVFAGPFSIEFKVYIVITFQSALSKLHSKTDPRTPRLWLAIESLPLELVRSRSDD
         PRLLTCPTVFAGPFSIEFKVYIVITFQS LSKLH KTDPRTPRLWLAIESLP+EL+R RSDD
Subjt:  PPRLLTCPTVFAGPFSIEFKVYIVITFQSALSKLHSKTDPRTPRLWLAIESLPLELVRSRSDD

XP_022137704.1 Down syndrome critical region protein 3 homolog isoform X1 [Momordica charantia]1.0e-84100Show/hide
Query:  MVIFYITQDTQRHPLLPELKSGGFRVTGKMSTLCSLSDPITGELTVEASAVPINSIDIHLCRVESVILGERIITETSVIQSTQIADGDVCRNITLPIYVI
        MVIFYITQDTQRHPLLPELKSGGFRVTGKMSTLCSLSDPITGELTVEASAVPINSIDIHLCRVESVILGERIITETSVIQSTQIADGDVCRNITLPIYVI
Subjt:  MVIFYITQDTQRHPLLPELKSGGFRVTGKMSTLCSLSDPITGELTVEASAVPINSIDIHLCRVESVILGERIITETSVIQSTQIADGDVCRNITLPIYVI

Query:  PPRLLTCPTVFAGPFSIEFKVYIVITFQSALSKLHSKTDPRTPRLWLAIESLPLELVRSRSDD
        PPRLLTCPTVFAGPFSIEFKVYIVITFQSALSKLHSKTDPRTPRLWLAIESLPLELVRSRSDD
Subjt:  PPRLLTCPTVFAGPFSIEFKVYIVITFQSALSKLHSKTDPRTPRLWLAIESLPLELVRSRSDD

XP_022924207.1 Down syndrome critical region protein 3 homolog isoform X1 [Cucurbita moschata]9.8e-8094.48Show/hide
Query:  MVIFYITQDTQRHPLLPELKSGGFRVTGKMSTLCSLSDPITGELTVEASAVPINSIDIHLCRVESVILGERIITETSVIQSTQIADGDVCRNITLPIYVI
        MVIFYITQDTQRHPLLPELKSGGFRVTGKM+TLCSLSDPITGELTVEASAVPI+SIDIHLCRVESVILGERIITETSVIQ+TQIADGDVCRNITLPIY I
Subjt:  MVIFYITQDTQRHPLLPELKSGGFRVTGKMSTLCSLSDPITGELTVEASAVPINSIDIHLCRVESVILGERIITETSVIQSTQIADGDVCRNITLPIYVI

Query:  PPRLLTCPTVFAGPFSIEFKVYIVITFQSALSKLHSKTDPRTPRLWLAIESLPLELVRSRSDD
         PRLLTCPTVFAGPFSIEFKVYIVITFQS LSKLH KTDPRTPRLWLAIESLPLEL+R RSDD
Subjt:  PPRLLTCPTVFAGPFSIEFKVYIVITFQSALSKLHSKTDPRTPRLWLAIESLPLELVRSRSDD

TrEMBL top hitse value%identityAlignment
A0A0A0LT45 Uncharacterized protein1.8e-7993.25Show/hide
Query:  MVIFYITQDTQRHPLLPELKSGGFRVTGKMSTLCSLSDPITGELTVEASAVPINSIDIHLCRVESVILGERIITETSVIQSTQIADGDVCRNITLPIYVI
        MVIFYITQDTQRHPLLPEL+SGGFRVTGKMSTLCSLSDP+TGEL VE SAVPINSIDIHLCRVESVILGERIITETSVIQ+TQIADGDVCRNITLPIYVI
Subjt:  MVIFYITQDTQRHPLLPELKSGGFRVTGKMSTLCSLSDPITGELTVEASAVPINSIDIHLCRVESVILGERIITETSVIQSTQIADGDVCRNITLPIYVI

Query:  PPRLLTCPTVFAGPFSIEFKVYIVITFQSALSKLHSKTDPRTPRLWLAIESLPLELVRSRSDD
         PRLLTCPTVFAGPFSIEFKVYIVITFQS LSKLH KTDPRTPRLWLAIESLP+EL+R RSDD
Subjt:  PPRLLTCPTVFAGPFSIEFKVYIVITFQSALSKLHSKTDPRTPRLWLAIESLPLELVRSRSDD

A0A1S3CMM2 Down syndrome critical region protein 3 homolog isoform X18.9e-7993.25Show/hide
Query:  MVIFYITQDTQRHPLLPELKSGGFRVTGKMSTLCSLSDPITGELTVEASAVPINSIDIHLCRVESVILGERIITETSVIQSTQIADGDVCRNITLPIYVI
        MVIFYITQDTQRHPLLPEL+SGGFRVTGKMSTLCSLSDPITGEL VE SAV INSIDIHLCRVESVILGERIITETSVIQ+TQIADGDVCRNITLPIYVI
Subjt:  MVIFYITQDTQRHPLLPELKSGGFRVTGKMSTLCSLSDPITGELTVEASAVPINSIDIHLCRVESVILGERIITETSVIQSTQIADGDVCRNITLPIYVI

Query:  PPRLLTCPTVFAGPFSIEFKVYIVITFQSALSKLHSKTDPRTPRLWLAIESLPLELVRSRSDD
         PRLLTCPTVFAGPFSIEFKVYIVITFQS LSKLH KTDPRTPRLWLAIESLP+EL+R RSDD
Subjt:  PPRLLTCPTVFAGPFSIEFKVYIVITFQSALSKLHSKTDPRTPRLWLAIESLPLELVRSRSDD

A0A1S3CPJ5 Down syndrome critical region protein 3 homolog isoform X38.9e-7993.25Show/hide
Query:  MVIFYITQDTQRHPLLPELKSGGFRVTGKMSTLCSLSDPITGELTVEASAVPINSIDIHLCRVESVILGERIITETSVIQSTQIADGDVCRNITLPIYVI
        MVIFYITQDTQRHPLLPEL+SGGFRVTGKMSTLCSLSDPITGEL VE SAV INSIDIHLCRVESVILGERIITETSVIQ+TQIADGDVCRNITLPIYVI
Subjt:  MVIFYITQDTQRHPLLPELKSGGFRVTGKMSTLCSLSDPITGELTVEASAVPINSIDIHLCRVESVILGERIITETSVIQSTQIADGDVCRNITLPIYVI

Query:  PPRLLTCPTVFAGPFSIEFKVYIVITFQSALSKLHSKTDPRTPRLWLAIESLPLELVRSRSDD
         PRLLTCPTVFAGPFSIEFKVYIVITFQS LSKLH KTDPRTPRLWLAIESLP+EL+R RSDD
Subjt:  PPRLLTCPTVFAGPFSIEFKVYIVITFQSALSKLHSKTDPRTPRLWLAIESLPLELVRSRSDD

A0A6J1C810 Down syndrome critical region protein 3 homolog isoform X14.9e-85100Show/hide
Query:  MVIFYITQDTQRHPLLPELKSGGFRVTGKMSTLCSLSDPITGELTVEASAVPINSIDIHLCRVESVILGERIITETSVIQSTQIADGDVCRNITLPIYVI
        MVIFYITQDTQRHPLLPELKSGGFRVTGKMSTLCSLSDPITGELTVEASAVPINSIDIHLCRVESVILGERIITETSVIQSTQIADGDVCRNITLPIYVI
Subjt:  MVIFYITQDTQRHPLLPELKSGGFRVTGKMSTLCSLSDPITGELTVEASAVPINSIDIHLCRVESVILGERIITETSVIQSTQIADGDVCRNITLPIYVI

Query:  PPRLLTCPTVFAGPFSIEFKVYIVITFQSALSKLHSKTDPRTPRLWLAIESLPLELVRSRSDD
        PPRLLTCPTVFAGPFSIEFKVYIVITFQSALSKLHSKTDPRTPRLWLAIESLPLELVRSRSDD
Subjt:  PPRLLTCPTVFAGPFSIEFKVYIVITFQSALSKLHSKTDPRTPRLWLAIESLPLELVRSRSDD

A0A6J1E8A3 Down syndrome critical region protein 3 homolog isoform X14.7e-8094.48Show/hide
Query:  MVIFYITQDTQRHPLLPELKSGGFRVTGKMSTLCSLSDPITGELTVEASAVPINSIDIHLCRVESVILGERIITETSVIQSTQIADGDVCRNITLPIYVI
        MVIFYITQDTQRHPLLPELKSGGFRVTGKM+TLCSLSDPITGELTVEASAVPI+SIDIHLCRVESVILGERIITETSVIQ+TQIADGDVCRNITLPIY I
Subjt:  MVIFYITQDTQRHPLLPELKSGGFRVTGKMSTLCSLSDPITGELTVEASAVPINSIDIHLCRVESVILGERIITETSVIQSTQIADGDVCRNITLPIYVI

Query:  PPRLLTCPTVFAGPFSIEFKVYIVITFQSALSKLHSKTDPRTPRLWLAIESLPLELVRSRSDD
         PRLLTCPTVFAGPFSIEFKVYIVITFQS LSKLH KTDPRTPRLWLAIESLPLEL+R RSDD
Subjt:  PPRLLTCPTVFAGPFSIEFKVYIVITFQSALSKLHSKTDPRTPRLWLAIESLPLELVRSRSDD

SwissProt top hitse value%identityAlignment
O14972 Vacuolar protein sorting-associated protein 26C5.9e-1942.86Show/hide
Query:  QDTQRHPLLPELKSGGFRVTGKM-STLCSLSDPITGELTVEASAVPINSIDIHLCRVESVILGERIITETSVIQSTQIADGDVCRNITLPIYVIPPRLLT
        Q+ +   LLP+     F + G + ST C ++ P+TGEL VE+S   I S+++ L RVE+    E    + + IQ+ QIADGDVCR +++PIY++ PRL T
Subjt:  QDTQRHPLLPELKSGGFRVTGKM-STLCSLSDPITGELTVEASAVPINSIDIHLCRVESVILGERIITETSVIQSTQIADGDVCRNITLPIYVIPPRLLT

Query:  CPTVFAGPFSIEFKVYIVI
        CPT+    F +EF+V IV+
Subjt:  CPTVFAGPFSIEFKVYIVI

O35075 Vacuolar protein sorting-associated protein 26C1.7e-1840.31Show/hide
Query:  STLCSLSDPITGELTVEASAVPINSIDIHLCRVESVILGERIITETSVIQSTQIADGDVCRNITLPIYVIPPRLLTCPTVFAGPFSIEFKVYIVITFQSA
        ST C+++ P+TGEL VE S   I SI++ L RVE+    E    + + IQ+ QIADGD+CRN+++P+Y++ PRL TCPT+    F +EF+V +V+     
Subjt:  STLCSLSDPITGELTVEASAVPINSIDIHLCRVESVILGERIITETSVIQSTQIADGDVCRNITLPIYVIPPRLLTCPTVFAGPFSIEFKVYIVITFQSA

Query:  LSKLHSKTDPRTPRLWLAIESLPLELVRS
           LH+          L  E+ PL+L R+
Subjt:  LSKLHSKTDPRTPRLWLAIESLPLELVRS

Q54DI8 Vacuolar protein sorting-associated protein 26C9.7e-1430.77Show/hide
Query:  LPELKSGGFRVTGKMSTLCSLSDPITGELTVEASAVPINSIDIHLCRVESVILGERIITETSVIQSTQIADGDVCRNITLPIYVIPPRLLTCPTVFAGPF
        +P  K  G    G +S +C++++   G + +E++   I S+++ L RVE+    +    E + IQ+ QIADGD+ RN  +P+Y++ PRL TC +     F
Subjt:  LPELKSGGFRVTGKMSTLCSLSDPITGELTVEASAVPINSIDIHLCRVESVILGERIITETSVIQSTQIADGDVCRNITLPIYVIPPRLLTCPTVFAGPF

Query:  SIEFKVYIVITFQSALSKLHSKTDPRTPRLWLAIESLPLELVR
         IEF+V +VI  +                  L  E+ P++L+R
Subjt:  SIEFKVYIVITFQSALSKLHSKTDPRTPRLWLAIESLPLELVR

Q5RF33 Vacuolar protein sorting-associated protein 26C5.9e-1942.86Show/hide
Query:  QDTQRHPLLPELKSGGFRVTGKM-STLCSLSDPITGELTVEASAVPINSIDIHLCRVESVILGERIITETSVIQSTQIADGDVCRNITLPIYVIPPRLLT
        Q+ +   LLP+     F + G + ST C ++ P+TGEL VE+S   I S+++ L RVE+    E    + + IQ+ QIADGDVCR +++PIY++ PRL T
Subjt:  QDTQRHPLLPELKSGGFRVTGKM-STLCSLSDPITGELTVEASAVPINSIDIHLCRVESVILGERIITETSVIQSTQIADGDVCRNITLPIYVIPPRLLT

Query:  CPTVFAGPFSIEFKVYIVI
        CPT+    F +EF+V IV+
Subjt:  CPTVFAGPFSIEFKVYIVI

Arabidopsis top hitse value%identityAlignment
AT1G48550.1 Vacuolar protein sorting-associated protein 262.4e-6874.69Show/hide
Query:  MVIFYITQDTQRHPLLPELKSGGFRVTGKMSTLCSLSDPITGELTVEASAVPINSIDIHLCRVESVILGERIITETSVIQSTQIADGDVCRNITLPIYVI
        +VIFYITQDTQRHPLLP++K+GGFRVTGK++T CSL DP++GELTVEAS+VPI SIDIHL RVES+I+GERI+TETS+IQSTQIADGDVCRN+TLPIYV+
Subjt:  MVIFYITQDTQRHPLLPELKSGGFRVTGKMSTLCSLSDPITGELTVEASAVPINSIDIHLCRVESVILGERIITETSVIQSTQIADGDVCRNITLPIYVI

Query:  PPRLLTCPTVFAGPFSIEFKVYIVITFQSALSKLHSKTDPRTPRLWLAIESLPLELVRSRSD
         PRLL CP+VFAGPFS+EFKV I I+F+S L+K   K+DP  PRLW+A+E LPLELVR++ D
Subjt:  PPRLLTCPTVFAGPFSIEFKVYIVITFQSALSKLHSKTDPRTPRLWLAIESLPLELVRSRSD

AT1G48550.2 Vacuolar protein sorting-associated protein 262.4e-6874.69Show/hide
Query:  MVIFYITQDTQRHPLLPELKSGGFRVTGKMSTLCSLSDPITGELTVEASAVPINSIDIHLCRVESVILGERIITETSVIQSTQIADGDVCRNITLPIYVI
        +VIFYITQDTQRHPLLP++K+GGFRVTGK++T CSL DP++GELTVEAS+VPI SIDIHL RVES+I+GERI+TETS+IQSTQIADGDVCRN+TLPIYV+
Subjt:  MVIFYITQDTQRHPLLPELKSGGFRVTGKMSTLCSLSDPITGELTVEASAVPINSIDIHLCRVESVILGERIITETSVIQSTQIADGDVCRNITLPIYVI

Query:  PPRLLTCPTVFAGPFSIEFKVYIVITFQSALSKLHSKTDPRTPRLWLAIESLPLELVRSRSD
         PRLL CP+VFAGPFS+EFKV I I+F+S L+K   K+DP  PRLW+A+E LPLELVR++ D
Subjt:  PPRLLTCPTVFAGPFSIEFKVYIVITFQSALSKLHSKTDPRTPRLWLAIESLPLELVRSRSD


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTTATCTTTTACATCACCCAGGATACACAAAGGCATCCACTACTTCCTGAACTAAAATCAGGTGGTTTTCGAGTGACAGGGAAAATGTCAACTCTGTGCTCTCTTTC
AGATCCCATCACTGGTGAATTAACTGTTGAAGCATCTGCAGTTCCCATTAATTCAATTGACATTCACTTGTGTCGTGTGGAATCAGTTATTCTTGGAGAGAGAATCATAA
CTGAAACCTCTGTGATCCAATCTACCCAGATAGCAGATGGAGACGTTTGTCGCAACATTACTCTGCCTATTTATGTCATACCACCCCGCCTTTTAACCTGCCCAACAGTC
TTTGCTGGCCCCTTTTCAATTGAATTCAAAGTTTACATCGTTATAACCTTTCAGTCAGCGCTATCAAAATTACATTCCAAGACTGATCCAAGAACTCCAAGACTATGGCT
TGCAATTGAATCTCTACCCCTTGAGCTTGTTCGAAGTCGGTCAGATGATTAG
mRNA sequenceShow/hide mRNA sequence
ATGGTTATCTTTTACATCACCCAGGATACACAAAGGCATCCACTACTTCCTGAACTAAAATCAGGTGGTTTTCGAGTGACAGGGAAAATGTCAACTCTGTGCTCTCTTTC
AGATCCCATCACTGGTGAATTAACTGTTGAAGCATCTGCAGTTCCCATTAATTCAATTGACATTCACTTGTGTCGTGTGGAATCAGTTATTCTTGGAGAGAGAATCATAA
CTGAAACCTCTGTGATCCAATCTACCCAGATAGCAGATGGAGACGTTTGTCGCAACATTACTCTGCCTATTTATGTCATACCACCCCGCCTTTTAACCTGCCCAACAGTC
TTTGCTGGCCCCTTTTCAATTGAATTCAAAGTTTACATCGTTATAACCTTTCAGTCAGCGCTATCAAAATTACATTCCAAGACTGATCCAAGAACTCCAAGACTATGGCT
TGCAATTGAATCTCTACCCCTTGAGCTTGTTCGAAGTCGGTCAGATGATTAG
Protein sequenceShow/hide protein sequence
MVIFYITQDTQRHPLLPELKSGGFRVTGKMSTLCSLSDPITGELTVEASAVPINSIDIHLCRVESVILGERIITETSVIQSTQIADGDVCRNITLPIYVIPPRLLTCPTV
FAGPFSIEFKVYIVITFQSALSKLHSKTDPRTPRLWLAIESLPLELVRSRSDD