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Moctig00277g080 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoctig00277g080
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionRibonuclease H
Genome locationtig00000277_pilon:12736..13509
RNA-Seq ExpressionMoctig00277g080
SyntenyMoctig00277g080
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KJB09732.1 hypothetical protein B456_001G160800 [Gossypium raimondii]1.3e-0796.88Show/hide
Query:  MSDGVLARCLGVEEAAKRLEEVHDKVCGTTTP
        MSDGVLARCLGVEEAAKRLEEVHDKVCGTT P
Subjt:  MSDGVLARCLGVEEAAKRLEEVHDKVCGTTTP
TrEMBL top hitse value%identityAlignment
A0A0D2LZA6 Uncharacterized protein6.3e-0896.88Show/hide
Query:  MSDGVLARCLGVEEAAKRLEEVHDKVCGTTTP
        MSDGVLARCLGVEEAAKRLEEVHDKVCGTT P
Subjt:  MSDGVLARCLGVEEAAKRLEEVHDKVCGTTTP
A0A2N9GY06 Ribonuclease H5.5e-0450Show/hide
Query:  KDLKCFTKCCGNLDYKMSDGVLARCLGVEEAAKRLEEVHDKVCG
        + +K +T  CG+L  ++ +GVLARC+ +EEA +RL EVH+K CG
Subjt:  KDLKCFTKCCGNLDYKMSDGVLARCLGVEEAAKRLEEVHDKVCG
A0A2N9HL55 Ribonuclease H9.4e-0433.33Show/hide
Query:  KDLKCFTKCCGNLDYKMSDGVLARCLGVEEAAKRLEEVHDKVCGTTTPGKPLQKIAKDKVMKRWRSCTNHMLASWRAP
        +++K +T   G+L  ++ +GVL RC+ +EEA ++L EVH+K CG    G   Q +  ++V      C   +   WR P
Subjt:  KDLKCFTKCCGNLDYKMSDGVLARCLGVEEAAKRLEEVHDKVCGTTTPGKPLQKIAKDKVMKRWRSCTNHMLASWRAP
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCAGGAAAGACTTGAAATGCTTCACAAAATGTTGTGGCAATTTGGACTACAAGATGTCCGATGGGGTCTTAGCTCGGTGCCTTGGCGTTGAAGAAGCAGCAAAGAG
ACTTGAAGAAGTTCATGATAAGGTCTGTGGGACAACAACACCGGGTAAACCTCTACAGAAGATTGCAAAAGACAAGGTGATGAAGCGATGGAGATCATGCACCAATCACA
TGCTGGCATCTTGGCGAGCACCAAGGAGGGCGAAAGCTGTTTCAGTATTTGCTGCAATCAGAAAAAAAGGGAAATCCCGGCGGGACCCTTGTTCGCCGTTACTGGAAGGT
ACTCGACTCCTTCTAGAAAAGTCAGGCCGATCGCCTTGGCTAAAAAAGAATGAATCTCAGTCAATGCGAGGGGTAGGGAGCGCCCGCCCTATCGAAAATGACGAGCGGCT
CGACTGTTTGGCAAGCCGGTCGAGGGGGGTCCGTATCTCCCCAAATCACTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCCAGGAAAGACTTGAAATGCTTCACAAAATGTTGTGGCAATTTGGACTACAAGATGTCCGATGGGGTCTTAGCTCGGTGCCTTGGCGTTGAAGAAGCAGCAAAGAG
ACTTGAAGAAGTTCATGATAAGGTCTGTGGGACAACAACACCGGGTAAACCTCTACAGAAGATTGCAAAAGACAAGGTGATGAAGCGATGGAGATCATGCACCAATCACA
TGCTGGCATCTTGGCGAGCACCAAGGAGGGCGAAAGCTGTTTCAGTATTTGCTGCAATCAGAAAAAAAGGGAAATCCCGGCGGGACCCTTGTTCGCCGTTACTGGAAGGT
ACTCGACTCCTTCTAGAAAAGTCAGGCCGATCGCCTTGGCTAAAAAAGAATGAATCTCAGTCAATGCGAGGGGTAGGGAGCGCCCGCCCTATCGAAAATGACGAGCGGCT
CGACTGTTTGGCAAGCCGGTCGAGGGGGGTCCGTATCTCCCCAAATCACTGA
Protein sequenceShow/hide protein sequence
MARKDLKCFTKCCGNLDYKMSDGVLARCLGVEEAAKRLEEVHDKVCGTTTPGKPLQKIAKDKVMKRWRSCTNHMLASWRAPRRAKAVSVFAAIRKKGKSRRDPCSPLLEG
TRLLLEKSGRSPWLKKNESQSMRGVGSARPIENDERLDCLASRSRGVRISPNH