; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Moctig00510g070 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoctig00510g070
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionAuxin-responsive protein
Genome locationtig00000510_pilon:79764..80208
RNA-Seq ExpressionMoctig00510g070
SyntenyMoctig00510g070
Gene Ontology termsGO:0006355 - regulation of transcription, DNA-templated (biological process)
GO:0005634 - nucleus (cellular component)
InterPro domainsIPR003311 - AUX/IAA protein
IPR033389 - AUX/IAA domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8650746.1 hypothetical protein Csa_017652 [Cucumis sativus]9.4e-2249.33Show/hide
Query:  DGDKSSSDRGD---PRKNQVVGWPPVRSHRRIKS-RVNDMDLFETQ-----------------RWIFGSRRGDGE---ALWMRCWMLRLCSDL----RRS
        +   +++D GD   P++NQVVGWPPV SHRR  S   N+ DL ET+                 +   GS +G  +   A+         CSD        
Subjt:  DGDKSSSDRGD---PRKNQVVGWPPVRSHRRIKS-RVNDMDLFETQ-----------------RWIFGSRRGDGE---ALWMRCWMLRLCSDL----RRS

Query:  GGDWMLVGDVPWRMFTESCKRLRIMKRSEAKGFEIHVP-ETLSSSSSKEL
         GDWMLVGDVPW MF ESCKRLRIMKR+E KGFEIHVP ETLSSSSSKEL
Subjt:  GGDWMLVGDVPWRMFTESCKRLRIMKRSEAKGFEIHVP-ETLSSSSSKEL

XP_004149851.2 auxin-induced protein 22A [Cucumis sativus]9.4e-2249.33Show/hide
Query:  DGDKSSSDRGD---PRKNQVVGWPPVRSHRRIKS-RVNDMDLFETQ-----------------RWIFGSRRGDGE---ALWMRCWMLRLCSDL----RRS
        +   +++D GD   P++NQVVGWPPV SHRR  S   N+ DL ET+                 +   GS +G  +   A+         CSD        
Subjt:  DGDKSSSDRGD---PRKNQVVGWPPVRSHRRIKS-RVNDMDLFETQ-----------------RWIFGSRRGDGE---ALWMRCWMLRLCSDL----RRS

Query:  GGDWMLVGDVPWRMFTESCKRLRIMKRSEAKGFEIHVP-ETLSSSSSKEL
         GDWMLVGDVPW MF ESCKRLRIMKR+E KGFEIHVP ETLSSSSSKEL
Subjt:  GGDWMLVGDVPWRMFTESCKRLRIMKRSEAKGFEIHVP-ETLSSSSSKEL

XP_008447488.1 PREDICTED: auxin-induced protein 22A-like [Cucumis melo]1.2e-2151.01Show/hide
Query:  NGDGDKSSSDRGDPRKNQVVGWPPVRSHRRIKS-RVNDMDLFETQ-----------------RWIFGSRRGDGE---ALWMRCWMLRLCSDL----RRSG
        N DG     DR  P++NQVVGWPPV SHRR  S   N+  L ET+                 +   GS +G  +   A+         CSD         
Subjt:  NGDGDKSSSDRGDPRKNQVVGWPPVRSHRRIKS-RVNDMDLFETQ-----------------RWIFGSRRGDGE---ALWMRCWMLRLCSDL----RRSG

Query:  GDWMLVGDVPWRMFTESCKRLRIMKRSEAKGFEIHVP-ETLSSSSSKEL
        GDWML+GDVPW MF ESCKRLRIMKRSEAKGFEIHVP ETLSSSSSKEL
Subjt:  GDWMLVGDVPWRMFTESCKRLRIMKRSEAKGFEIHVP-ETLSSSSSKEL

XP_023525671.1 auxin-induced protein 22A-like [Cucurbita pepo subsp. pepo]2.7e-2148.05Show/hide
Query:  MIGNGDGDKSSS------DRGDPRKNQVVGWPPVRSHRRIKSRVNDMDLFETQR-WIFGSRRGDGEALWMRCWMLRLCSDLRRS----------------
        M  N  GD+ SS      DR   +KNQVVGWPPV S+RR +S  ND DL ET + ++  S  G      +   M +  SDL  +                
Subjt:  MIGNGDGDKSSS------DRGDPRKNQVVGWPPVRSHRRIKSRVNDMDLFETQR-WIFGSRRGDGEALWMRCWMLRLCSDLRRS----------------

Query:  -----GGDWMLVGDVPWRMFTESCKRLRIMKRSEAKGFEIHVPETLSSSSSKEL
              GDWMLVGDVPW+MF ESCKRLRIMKRSEAKGFEI VP+T SSSS ++L
Subjt:  -----GGDWMLVGDVPWRMFTESCKRLRIMKRSEAKGFEIHVPETLSSSSSKEL

XP_038875964.1 auxin-induced protein 22C-like [Benincasa hispida]3.8e-2351.7Show/hide
Query:  DGDKSSSDRGDPRKNQVVGWPPVRSHRRIKS-RVNDMDLFETQRWIFGSRRGDGEALWMR--------------CWMLRL------CSDL----RRSGGD
        +   +  DR  P++NQVVGWPPV SHRR  S   ND DL+ET+      +     A ++R                M  L      CSD         GD
Subjt:  DGDKSSSDRGDPRKNQVVGWPPVRSHRRIKS-RVNDMDLFETQRWIFGSRRGDGEALWMR--------------CWMLRL------CSDL----RRSGGD

Query:  WMLVGDVPWRMFTESCKRLRIMKRSEAKGFEIHVP-ETLSSSSSKEL
        WMLVGDVPW+MF ESCKRLRIMKRSEAKGFEIHVP ETLSSSSSKEL
Subjt:  WMLVGDVPWRMFTESCKRLRIMKRSEAKGFEIHVP-ETLSSSSSKEL

TrEMBL top hitse value%identityAlignment
A0A0A0L852 Auxin-responsive protein4.6e-2249.33Show/hide
Query:  DGDKSSSDRGD---PRKNQVVGWPPVRSHRRIKS-RVNDMDLFETQ-----------------RWIFGSRRGDGE---ALWMRCWMLRLCSDL----RRS
        +   +++D GD   P++NQVVGWPPV SHRR  S   N+ DL ET+                 +   GS +G  +   A+         CSD        
Subjt:  DGDKSSSDRGD---PRKNQVVGWPPVRSHRRIKS-RVNDMDLFETQ-----------------RWIFGSRRGDGE---ALWMRCWMLRLCSDL----RRS

Query:  GGDWMLVGDVPWRMFTESCKRLRIMKRSEAKGFEIHVP-ETLSSSSSKEL
         GDWMLVGDVPW MF ESCKRLRIMKR+E KGFEIHVP ETLSSSSSKEL
Subjt:  GGDWMLVGDVPWRMFTESCKRLRIMKRSEAKGFEIHVP-ETLSSSSSKEL

A0A1S3BI60 Auxin-responsive protein5.9e-2251.01Show/hide
Query:  NGDGDKSSSDRGDPRKNQVVGWPPVRSHRRIKS-RVNDMDLFETQ-----------------RWIFGSRRGDGE---ALWMRCWMLRLCSDL----RRSG
        N DG     DR  P++NQVVGWPPV SHRR  S   N+  L ET+                 +   GS +G  +   A+         CSD         
Subjt:  NGDGDKSSSDRGDPRKNQVVGWPPVRSHRRIKS-RVNDMDLFETQ-----------------RWIFGSRRGDGE---ALWMRCWMLRLCSDL----RRSG

Query:  GDWMLVGDVPWRMFTESCKRLRIMKRSEAKGFEIHVP-ETLSSSSSKEL
        GDWML+GDVPW MF ESCKRLRIMKRSEAKGFEIHVP ETLSSSSSKEL
Subjt:  GDWMLVGDVPWRMFTESCKRLRIMKRSEAKGFEIHVP-ETLSSSSSKEL

A0A5D3DAE6 Auxin-responsive protein5.9e-2251.01Show/hide
Query:  NGDGDKSSSDRGDPRKNQVVGWPPVRSHRRIKS-RVNDMDLFETQ-----------------RWIFGSRRGDGE---ALWMRCWMLRLCSDL----RRSG
        N DG     DR  P++NQVVGWPPV SHRR  S   N+  L ET+                 +   GS +G  +   A+         CSD         
Subjt:  NGDGDKSSSDRGDPRKNQVVGWPPVRSHRRIKS-RVNDMDLFETQ-----------------RWIFGSRRGDGE---ALWMRCWMLRLCSDL----RRSG

Query:  GDWMLVGDVPWRMFTESCKRLRIMKRSEAKGFEIHVP-ETLSSSSSKEL
        GDWML+GDVPW MF ESCKRLRIMKRSEAKGFEIHVP ETLSSSSSKEL
Subjt:  GDWMLVGDVPWRMFTESCKRLRIMKRSEAKGFEIHVP-ETLSSSSSKEL

A0A6J1GBF5 Auxin-responsive protein8.6e-2148.7Show/hide
Query:  MIGNGDGDKSSS---DRGDPR---KNQVVGWPPVRSHRRIKSRVNDMDLFET-QRWIFGSRRGDGEALWMRCWMLRLCSDLRRS----------------
        M GN  GD+ SS   D GD R   K QVVGWPPV S+RR +S  ND DL ET + ++  S  G      +   M +  SDL  +                
Subjt:  MIGNGDGDKSSS---DRGDPR---KNQVVGWPPVRSHRRIKSRVNDMDLFET-QRWIFGSRRGDGEALWMRCWMLRLCSDLRRS----------------

Query:  -----GGDWMLVGDVPWRMFTESCKRLRIMKRSEAKGFEIHVPETLSSSSSKEL
              GDWMLVGDVPW+MF ESCKRLRIMKRSEAKGFEI VP+T S SS ++L
Subjt:  -----GGDWMLVGDVPWRMFTESCKRLRIMKRSEAKGFEIHVPETLSSSSSKEL

A0A6J1KBS9 Auxin-responsive protein1.7e-2150.32Show/hide
Query:  MIGNGDGDKSSS---DRGDPR---KNQVVGWPPVRSHRRIKSRVNDMDLFETQRWI---------------FGSRRGDGEALWMRCWMLRLC----SD--
        M GN  GD+ SS   D GD R   KNQVVGWPPV S+RR +S  ND DL +T +                  G  +G  + L M    L  C    SD  
Subjt:  MIGNGDGDKSSS---DRGDPR---KNQVVGWPPVRSHRRIKSRVNDMDLFETQRWI---------------FGSRRGDGEALWMRCWMLRLC----SD--

Query:  --LRRSGGDWMLVGDVPWRMFTESCKRLRIMKRSEAKGFEIHVPETLSSSSSKEL
               GDWMLVGDVPW+MF ESCKRLRIMKRSEAKGFEI VP+T SSSS ++L
Subjt:  --LRRSGGDWMLVGDVPWRMFTESCKRLRIMKRSEAKGFEIHVPETLSSSSSKEL

SwissProt top hitse value%identityAlignment
O24409 Auxin-responsive protein IAA193.7e-1339.42Show/hide
Query:  GDKSSSDRGDPRKNQVVGWPPVRSHRRIKS----------------------RVNDMDLFETQRW---------IFGSRRGDGEAL--WMRCWMLRLCSD
        GD    +     K+QVVGWPPV S+R+  S                       +  MDL  +Q +         +FG  RG G AL     C  + +  D
Subjt:  GDKSSSDRGDPRKNQVVGWPPVRSHRRIKS----------------------RVNDMDLFETQRW---------IFGSRRGDGEAL--WMRCWMLRLCSD

Query:  LRRSGGDWMLVGDVPWRMFTESCKRLRIMKRSEAKGF
             GDWML GDVPW MF ESCKRLRIMKRS+A GF
Subjt:  LRRSGGDWMLVGDVPWRMFTESCKRLRIMKRSEAKGF

O24541 Auxin-induced protein 22C2.3e-1540.15Show/hide
Query:  GDGDKSSSDRGDPRKNQVVGWPPVRSHRRIKSRVNDMDLFE---------TQRWIFGSRRGDGE---ALWMRCWMLRLCSDLRRS------------GGD
        G+   S  D     KNQVVGWPPV S+R+ K+ VN+  L+           ++      +G  +   AL        +C  L+ +             GD
Subjt:  GDGDKSSSDRGDPRKNQVVGWPPVRSHRRIKSRVNDMDLFE---------TQRWIFGSRRGDGE---ALWMRCWMLRLCSDLRRS------------GGD

Query:  WMLVGDVPWRMFTESCKRLRIMKRSEAKGFEI
        WMLVGDVPW MF ESCKRLRIMKRS+AKGF++
Subjt:  WMLVGDVPWRMFTESCKRLRIMKRSEAKGFEI

P13088 Auxin-induced protein AUX225.7e-1441.43Show/hide
Query:  IGNGDGDKSSSDRGDPR-----KNQVVGWPPVRSHRRIKSRVND----------MDLFETQRWI-FGSRRGDG------EALWMRCWMLRLCSDLRRS--
        I +G GD++SS  G  R     K+QVVGWPPV S+R+ K+ +N+          MD     R I  G  +G        + L+    M+    +   S  
Subjt:  IGNGDGDKSSSDRGDPR-----KNQVVGWPPVRSHRRIKSRVND----------MDLFETQRWI-FGSRRGDG------EALWMRCWMLRLCSDLRRS--

Query:  -------GGDWMLVGDVPWRMFTESCKRLRIMKRSEAKGF
                GDWMLVGDVPW MF ESCKRLRIMK+S+AKGF
Subjt:  -------GGDWMLVGDVPWRMFTESCKRLRIMKRSEAKGF

P32293 Auxin-induced protein 22A1.2e-1440.3Show/hide
Query:  GDGDKSSSDRGDPR---KNQVVGWPPVRSHRRIKSRVNDMDLFET----------QRWIFGSRRGDG------EALWMRCWMLRLCSDLRR---------
        GD + SS   GD +   KNQVVGWPPV S+R+ K+ VN+                ++   G  +G        E L+    M+    ++           
Subjt:  GDGDKSSSDRGDPR---KNQVVGWPPVRSHRRIKSRVNDMDLFET----------QRWIFGSRRGDG------EALWMRCWMLRLCSDLRR---------

Query:  SGGDWMLVGDVPWRMFTESCKRLRIMKRSEAKGF
          GDWMLVGDVPW MF ESCKRLRIMKR++AKGF
Subjt:  SGGDWMLVGDVPWRMFTESCKRLRIMKRSEAKGF

P49680 Auxin-induced protein IAA65.2e-1541.35Show/hide
Query:  GDGDKSSSDRGDPRKNQVVGWPPVRSHRRIKSRVNDMDLFETQRWIFGS---RRGD-------------GEALWMRCWMLRLCSDLRR---------SGG
        G GD+ S D    +KNQVVGWPPV S+R  K  +N+      +  + G+   R+ D              E L+  C +     D              G
Subjt:  GDGDKSSSDRGDPRKNQVVGWPPVRSHRRIKSRVNDMDLFETQRWIFGS---RRGD-------------GEALWMRCWMLRLCSDLRR---------SGG

Query:  DWMLVGDVPWRMFTESCKRLRIMKRSEAKGFEI
        DWMLVGDVPW MF ESCKRLRIMKRS+AKGF++
Subjt:  DWMLVGDVPWRMFTESCKRLRIMKRSEAKGFEI

Arabidopsis top hitse value%identityAlignment
AT1G04240.1 AUX/IAA transcriptional regulator family protein1.1e-1237.5Show/hide
Query:  DGDKSSSDRGDPRKNQVVGWPPVRSHRR--IKSRVND-------------MDLFETQRWI-FGSRRGDGEALWMRCWMLRLC--SDLRRSG---------
        +     ++   PRK Q+VGWPPVRS+R+  I+S+ N+             MD     R I     +G  E L     M +        R G         
Subjt:  DGDKSSSDRGDPRKNQVVGWPPVRSHRR--IKSRVND-------------MDLFETQRWI-FGSRRGDGEALWMRCWMLRLC--SDLRRSG---------

Query:  -----GDWMLVGDVPWRMFTESCKRLRIMKRSEAKG
             GDWML+GDVPW MF  +CKRLRIMK SEAKG
Subjt:  -----GDWMLVGDVPWRMFTESCKRLRIMKRSEAKG

AT1G52830.1 indole-3-acetic acid 63.8e-1338.33Show/hide
Query:  KNQVVGWPPVRSHRRIKSR-------------------VNDMDLFETQRWI---------FGSRRGDGEALWMRCWMLRLCSDLRRSGGDWMLVGDVPWR
        K+Q VGWPPV S+RR K+                    +  +DL  +  +I         FG           +C  + +  D  R   DWMLVGDVPW+
Subjt:  KNQVVGWPPVRSHRRIKSR-------------------VNDMDLFETQRWI---------FGSRRGDGEALWMRCWMLRLCSDLRRSGGDWMLVGDVPWR

Query:  MFTESCKRLRIMKRSEAKGF
        MF ESCKRLRI+KRS+A GF
Subjt:  MFTESCKRLRIMKRSEAKGF

AT3G15540.1 indole-3-acetic acid inducible 192.6e-1439.42Show/hide
Query:  GDKSSSDRGDPRKNQVVGWPPVRSHRRIKS----------------------RVNDMDLFETQRW---------IFGSRRGDGEAL--WMRCWMLRLCSD
        GD    +     K+QVVGWPPV S+R+  S                       +  MDL  +Q +         +FG  RG G AL     C  + +  D
Subjt:  GDKSSSDRGDPRKNQVVGWPPVRSHRRIKS----------------------RVNDMDLFETQRW---------IFGSRRGDGEAL--WMRCWMLRLCSD

Query:  LRRSGGDWMLVGDVPWRMFTESCKRLRIMKRSEAKGF
             GDWML GDVPW MF ESCKRLRIMKRS+A GF
Subjt:  LRRSGGDWMLVGDVPWRMFTESCKRLRIMKRSEAKGF

AT3G23030.1 indole-3-acetic acid inducible 21.6e-1139.66Show/hide
Query:  PRKNQVVGWPPVRSHRRIKSRVN----DMDLFETQRWI-FGSRRGDGEAL-----WMRCWMLRLC--SDLRRSG---------GDWMLVGDVPWRMFTES
        P K Q+VGWPPVRS R+  + V+     MD     R I   + +   E L       +  +   C     + SG         GDWMLVGDVPW MF+ S
Subjt:  PRKNQVVGWPPVRSHRRIKSRVN----DMDLFETQRWI-FGSRRGDGEAL-----WMRCWMLRLC--SDLRRSG---------GDWMLVGDVPWRMFTES

Query:  CKRLRIMKRSEAKGFE
        CKRLRIMK S+A   +
Subjt:  CKRLRIMKRSEAKGFE

AT5G43700.1 AUX/IAA transcriptional regulator family protein1.1e-1233.59Show/hide
Query:  SDRGDPRKNQVVGWPPVRSHRRIKSRVNDMDLFETQRWIFGSRRGDGEALWMRCWMLRLCSDLRRS------------------------------GGDW
        ++   P K Q+VGWPPVRS+R+   +    +      ++  S  G      +   M +   +L +S                               GDW
Subjt:  SDRGDPRKNQVVGWPPVRSHRRIKSRVNDMDLFETQRWIFGSRRGDGEALWMRCWMLRLCSDLRRS------------------------------GGDW

Query:  MLVGDVPWRMFTESCKRLRIMKRSEAKG
        MLVGDVPW MF  SCKRLRIMK SE KG
Subjt:  MLVGDVPWRMFTESCKRLRIMKRSEAKG


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATTGGAAATGGAGATGGAGATAAGAGTAGCTCGGACCGCGGCGACCCGAGGAAAAACCAAGTTGTGGGGTGGCCGCCGGTCCGCTCCCACCGGAGAATTAAGAGCAG
AGTTAACGACATGGATCTATTTGAGACGCAGAGATGGATATTCGGATCTCGGCGCGGCGATGGAGAAGCTCTTTGGATGCGGTGTTGGATGCTCCGATTATGTTCCGATC
TACGAAGATCGGGAGGCGATTGGATGCTCGTTGGGGATGTACCATGGAGGATGTTTACTGAATCATGCAAAAGACTGAGGATAATGAAGAGATCGGAAGCTAAAGGATTT
GAGATTCATGTCCCAGAAACCCTAAGTAGTAGTTCTTCCAAGGAACTGTGA
mRNA sequenceShow/hide mRNA sequence
ATGATTGGAAATGGAGATGGAGATAAGAGTAGCTCGGACCGCGGCGACCCGAGGAAAAACCAAGTTGTGGGGTGGCCGCCGGTCCGCTCCCACCGGAGAATTAAGAGCAG
AGTTAACGACATGGATCTATTTGAGACGCAGAGATGGATATTCGGATCTCGGCGCGGCGATGGAGAAGCTCTTTGGATGCGGTGTTGGATGCTCCGATTATGTTCCGATC
TACGAAGATCGGGAGGCGATTGGATGCTCGTTGGGGATGTACCATGGAGGATGTTTACTGAATCATGCAAAAGACTGAGGATAATGAAGAGATCGGAAGCTAAAGGATTT
GAGATTCATGTCCCAGAAACCCTAAGTAGTAGTTCTTCCAAGGAACTGTGA
Protein sequenceShow/hide protein sequence
MIGNGDGDKSSSDRGDPRKNQVVGWPPVRSHRRIKSRVNDMDLFETQRWIFGSRRGDGEALWMRCWMLRLCSDLRRSGGDWMLVGDVPWRMFTESCKRLRIMKRSEAKGF
EIHVPETLSSSSSKEL