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Moctig00543g010 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoctig00543g010
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionProtein root UVB sensitive 1, chloroplastic
Genome locationtig00000543_pilon:839..1956
RNA-Seq ExpressionMoctig00543g010
SyntenyMoctig00543g010
Gene Ontology termsGO:0009507 - chloroplast (cellular component)
GO:0009528 - plastid inner membrane (cellular component)
GO:0005488 - binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
CAD5336140.1 unnamed protein product [Arabidopsis thaliana]1.0e-4785.71Show/hide
Query:  MNGAKRSAEAVGCKNASVGERSALEGSTRASGGGRSGSENVGLSNANIGENPMPRKPKGSSAR-----VRRGRENTSSQCSSTRRYGAEVTHAILPGKAR
        MNGAKRSAEAVGC+NASVGERSAL GS RASGGGRSGSENVGLSNANIGENPMPRKPKGSSAR     VRRGREN  SQCSSTRRYGAEVTHAILPGKAR
Subjt:  MNGAKRSAEAVGCKNASVGERSALEGSTRASGGGRSGSENVGLSNANIGENPMPRKPKGSSAR-----VRRGRENTSSQCSSTRRYGAEVTHAILPGKAR

Query:  TTFNKRVPVPETDTVTRPGRLFTKNTGLRKVLR
        TTFNKR        VTRPGRLFTKNTGLRKV+R
Subjt:  TTFNKRVPVPETDTVTRPGRLFTKNTGLRKVLR

KAF1876778.1 hypothetical protein Lal_00043708 [Lupinus albus]1.0e-5567.48Show/hide
Query:  MNGAKRSAEAVGCKNASVGERSALEGSTRASGGGRSGSENVGLSNANIGENPMPRKPKGSSAR-----VRRGRENTSSQCSSTRRYGAEVTHAILPGKAR
        MNGAKRSAEAVGCKN SVGERSALEG TRAS GGRSGSENVGLSNAN+GENPMPRKPKGSSAR     VRRGREN SSQCSSTRRYGAEVTHAILPGKAR
Subjt:  MNGAKRSAEAVGCKNASVGERSALEGSTRASGGGRSGSENVGLSNANIGENPMPRKPKGSSAR-----VRRGRENTSSQCSSTRRYGAEVTHAILPGKAR

Query:  TTFNKRVPVPETDTVTRP---GR-------LFTK-------------------NTGLRKVLRWRA------KKAPFRGAEPSVRYHSGRARILTLCQDLR
        TTFNKRVPVPETDT   P   GR       ++ K                   N    KV ++        ++ P  G EPSVRYHSGRARILTLCQDLR
Subjt:  TTFNKRVPVPETDTVTRP---GR-------LFTK-------------------NTGLRKVLRWRA------KKAPFRGAEPSVRYHSGRARILTLCQDLR

Query:  AKGQSQ
        AKGQ Q
Subjt:  AKGQSQ

KAG9438714.1 hypothetical protein H6P81_021346 [Aristolochia fimbriata]5.2e-6383.04Show/hide
Query:  MNGAKRSAEAVGC-KNASVGERSALEGSTRASGGGRSGSENVGLSNANIGENPMPRKPKGSSARVRRGRENTSSQCSSTRRYGAEVTHAILPGKARTTFN
        MNGAKRSAEAVGC KNASVGERSALE STRAS  GRSGSENVGLSNANIGENPMPRKPKGSSARVRRGREN SSQC STRRYGAEVTHAILPGKARTTFN
Subjt:  MNGAKRSAEAVGC-KNASVGERSALEGSTRASGGGRSGSENVGLSNANIGENPMPRKPKGSSARVRRGRENTSSQCSSTRRYGAEVTHAILPGKARTTFN

Query:  KRVPVPETDTVTRPGRLFTKNTGLRKV---LRWRAKKAPFRGAEPSVRYHSGRARILTLCQDLRAKGQSQV
        KRVPVPETDT      L     G       LRW+AKKA   G+EPSVRYHSGRARILTLCQDLRAKGQSQV
Subjt:  KRVPVPETDTVTRPGRLFTKNTGLRKV---LRWRAKKAPFRGAEPSVRYHSGRARILTLCQDLRAKGQSQV

PHT42292.1 hypothetical protein CQW23_16317 [Capsicum baccatum]1.3e-5375.29Show/hide
Query:  MNGAKRSAEAVGCKNASVGERSALEGSTRASGGGRSGSENVGLSNANIGENPMPRKPKGSSARVRRGRENTSSQCSSTRRYGAEVTHAILPGKARTTFNK
        MNG KRSAEA+GCKN SVGERSALE S  ASGGGRS S+NV LSN NIGENPMPRKPKGSSARVRRGREN SSQCS+TRRYGAEVTHAILPGKARTT +K
Subjt:  MNGAKRSAEAVGCKNASVGERSALEGSTRASGGGRSGSENVGLSNANIGENPMPRKPKGSSARVRRGRENTSSQCSSTRRYGAEVTHAILPGKARTTFNK

Query:  RVPVPETDTVTRPGRLFTKNTGLR---KVLRWRAKKAPFRGAEPSVRYHSGRARILTLCQDLRAKGQSQV
        RVPVPETDT   P      N G       +       P  G EPSVRYHSGRARILTLCQDLRAKGQSQV
Subjt:  RVPVPETDTVTRPGRLFTKNTGLR---KVLRWRAKKAPFRGAEPSVRYHSGRARILTLCQDLRAKGQSQV

PPD93814.1 hypothetical protein GOBAR_DD09165 [Gossypium barbadense]1.5e-4962.5Show/hide
Query:  MNGAKRSAEAVGCKNASVGERSALEGSTRASGGGRSGSENVGLSNANIGENPMPRKPKGSSAR-----VRRGRENTSSQCSSTRRYGAEVTHAILPGKAR
        MNGAKRSAEAVGCKNASVGERSAL GSTR SG  RSGSENV  SNANIGEN MPRKPKGSSAR     VRRGREN  SQCSST+RYGAEVTHAILP KAR
Subjt:  MNGAKRSAEAVGCKNASVGERSALEGSTRASGGGRSGSENVGLSNANIGENPMPRKPKGSSAR-----VRRGRENTSSQCSSTRRYGAEVTHAILPGKAR

Query:  TTFNKRVPVPETDT-------------------------------VTRPGRLFTKNTGLRKVLRW------RAKKAPFRGAEPSVRYHSGRARILTLCQD
        T FNKRVPVPETDT                                T       +N    KV ++      R ++ P  G EPSVRYHSGRARILTLCQD
Subjt:  TTFNKRVPVPETDT-------------------------------VTRPGRLFTKNTGLRKVLRW------RAKKAPFRGAEPSVRYHSGRARILTLCQD

Query:  LRAKGQSQ
        LRAK QSQ
Subjt:  LRAKGQSQ

TrEMBL top hitse value%identityAlignment
A0A2G2WAQ9 Uncharacterized protein6.2e-5475.29Show/hide
Query:  MNGAKRSAEAVGCKNASVGERSALEGSTRASGGGRSGSENVGLSNANIGENPMPRKPKGSSARVRRGRENTSSQCSSTRRYGAEVTHAILPGKARTTFNK
        MNG KRSAEA+GCKN SVGERSALE S  ASGGGRS S+NV LSN NIGENPMPRKPKGSSARVRRGREN SSQCS+TRRYGAEVTHAILPGKARTT +K
Subjt:  MNGAKRSAEAVGCKNASVGERSALEGSTRASGGGRSGSENVGLSNANIGENPMPRKPKGSSARVRRGRENTSSQCSSTRRYGAEVTHAILPGKARTTFNK

Query:  RVPVPETDTVTRPGRLFTKNTGLR---KVLRWRAKKAPFRGAEPSVRYHSGRARILTLCQDLRAKGQSQV
        RVPVPETDT   P      N G       +       P  G EPSVRYHSGRARILTLCQDLRAKGQSQV
Subjt:  RVPVPETDTVTRPGRLFTKNTGLR---KVLRWRAKKAPFRGAEPSVRYHSGRARILTLCQDLRAKGQSQV

A0A2P5VSX7 Uncharacterized protein1.5e-4763.59Show/hide
Query:  MNGAKRSAEAVGCKNASVGERSALEGSTRASGGGRSGSENVGLSNANIGENPMPRKPKGSSAR-----VRRGRENTSSQCSSTRRYGAEVTHAILPGKAR
        MNGAK+ AEAVGCKN SVGERS L GSTR SG  RS SENVGLSNANIGENPMPRK  GSS R     V +GR+   SQCSSTR Y  EVTHAI  GKA+
Subjt:  MNGAKRSAEAVGCKNASVGERSALEGSTRASGGGRSGSENVGLSNANIGENPMPRKPKGSSAR-----VRRGRENTSSQCSSTRRYGAEVTHAILPGKAR

Query:  TTFNKRVPVPETDTVTRP--------GRLFTK--------NTGLRKVLRWRAKKAPFRGA-EPSVRYHSGRARILTLCQDLRAKGQSQVDSFYGA
        TTFNKRVPVPET T            G+L TK          G    +  + K+  F G  EPSVRYHSGRARILTLCQDL  KGQSQVDSFYGA
Subjt:  TTFNKRVPVPETDTVTRP--------GRLFTK--------NTGLRKVLRWRAKKAPFRGA-EPSVRYHSGRARILTLCQDLRAKGQSQVDSFYGA

A0A6A5MXD5 Uncharacterized protein5.1e-5667.48Show/hide
Query:  MNGAKRSAEAVGCKNASVGERSALEGSTRASGGGRSGSENVGLSNANIGENPMPRKPKGSSAR-----VRRGRENTSSQCSSTRRYGAEVTHAILPGKAR
        MNGAKRSAEAVGCKN SVGERSALEG TRAS GGRSGSENVGLSNAN+GENPMPRKPKGSSAR     VRRGREN SSQCSSTRRYGAEVTHAILPGKAR
Subjt:  MNGAKRSAEAVGCKNASVGERSALEGSTRASGGGRSGSENVGLSNANIGENPMPRKPKGSSAR-----VRRGRENTSSQCSSTRRYGAEVTHAILPGKAR

Query:  TTFNKRVPVPETDTVTRP---GR-------LFTK-------------------NTGLRKVLRWRA------KKAPFRGAEPSVRYHSGRARILTLCQDLR
        TTFNKRVPVPETDT   P   GR       ++ K                   N    KV ++        ++ P  G EPSVRYHSGRARILTLCQDLR
Subjt:  TTFNKRVPVPETDTVTRP---GR-------LFTK-------------------NTGLRKVLRWRA------KKAPFRGAEPSVRYHSGRARILTLCQDLR

Query:  AKGQSQ
        AKGQ Q
Subjt:  AKGQSQ

A0A6N2NAY5 Uncharacterized protein9.9e-5255.78Show/hide
Query:  MNGAKRSAEAVGCKNASVGERSALEGSTRASGGGRSGSENVGLSNANIGENPMPRKPKGSSAR-----VRRGRENTSSQCSSTRRYGAEVTHAILPGKAR
        MNGAKRSAEAVGCKNAS        GSTRASGGGRSGSENVGLSNANIGENPMPRKPKGSSAR     VRRGREN SSQC STRRYGAEVTHAILPGKAR
Subjt:  MNGAKRSAEAVGCKNASVGERSALEGSTRASGGGRSGSENVGLSNANIGENPMPRKPKGSSAR-----VRRGRENTSSQCSSTRRYGAEVTHAILPGKAR

Query:  TTFNKRVPVPETD---TVTRPGRLFTKNTGLRKVLR-----------------------------------------------------W----------
        TTFNK    P+      VTRPGRLFTKNTGLRKV+R                                                     W          
Subjt:  TTFNKRVPVPETD---TVTRPGRLFTKNTGLRKVLR-----------------------------------------------------W----------

Query:  --------------RAKKAPFRGAEPSVRYHSGRARILTLCQDLRAKGQSQ
                      R ++ P  G+EPSVRYHSGRARILTLCQDLRAKGQSQ
Subjt:  --------------RAKKAPFRGAEPSVRYHSGRARILTLCQDLRAKGQSQ

A0A7G2FKR6 Uncharacterized protein ycf685.1e-4885.71Show/hide
Query:  MNGAKRSAEAVGCKNASVGERSALEGSTRASGGGRSGSENVGLSNANIGENPMPRKPKGSSAR-----VRRGRENTSSQCSSTRRYGAEVTHAILPGKAR
        MNGAKRSAEAVGC+NASVGERSAL GS RASGGGRSGSENVGLSNANIGENPMPRKPKGSSAR     VRRGREN  SQCSSTRRYGAEVTHAILPGKAR
Subjt:  MNGAKRSAEAVGCKNASVGERSALEGSTRASGGGRSGSENVGLSNANIGENPMPRKPKGSSAR-----VRRGRENTSSQCSSTRRYGAEVTHAILPGKAR

Query:  TTFNKRVPVPETDTVTRPGRLFTKNTGLRKVLR
        TTFNKR        VTRPGRLFTKNTGLRKV+R
Subjt:  TTFNKRVPVPETDTVTRPGRLFTKNTGLRKVLR

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAACGGGGCTAAGCGATCTGCCGAAGCTGTGGGATGTAAAAATGCATCGGTAGGGGAGCGTTCCGCCTTAGAGGGAAGCACCCGCGCGAGCGGTGGTGGACGAAGCGG
AAGCGAGAATGTCGGCTTGAGTAACGCAAACATTGGTGAGAATCCAATGCCCCGAAAACCTAAGGGTTCCTCCGCAAGGGTAAGAAGGGGTAGAGAAAATACCTCGAGCC
AATGTTCGAGTACCAGGCGCTACGGCGCTGAAGTAACCCATGCCATACTCCCAGGAAAAGCTCGAACGACCTTCAACAAAAGGGTACCTGTACCCGAAACCGACACAGTG
ACCAGGCCCGGGCGACTGTTTACCAAAAACACAGGTCTCCGCAAAGTCCTTAGGTGGAGGGCGAAGAAGGCCCCCTTCCGGGGGGCCGAGCCATCAGTGAGATACCACTC
TGGAAGAGCTAGAATTCTAACCTTGTGTCAGGACCTACGGGCCAAGGGACAGTCTCAGGTAGACAGTTTCTATGGGGCGTAG
mRNA sequenceShow/hide mRNA sequence
ATGAACGGGGCTAAGCGATCTGCCGAAGCTGTGGGATGTAAAAATGCATCGGTAGGGGAGCGTTCCGCCTTAGAGGGAAGCACCCGCGCGAGCGGTGGTGGACGAAGCGG
AAGCGAGAATGTCGGCTTGAGTAACGCAAACATTGGTGAGAATCCAATGCCCCGAAAACCTAAGGGTTCCTCCGCAAGGGTAAGAAGGGGTAGAGAAAATACCTCGAGCC
AATGTTCGAGTACCAGGCGCTACGGCGCTGAAGTAACCCATGCCATACTCCCAGGAAAAGCTCGAACGACCTTCAACAAAAGGGTACCTGTACCCGAAACCGACACAGTG
ACCAGGCCCGGGCGACTGTTTACCAAAAACACAGGTCTCCGCAAAGTCCTTAGGTGGAGGGCGAAGAAGGCCCCCTTCCGGGGGGCCGAGCCATCAGTGAGATACCACTC
TGGAAGAGCTAGAATTCTAACCTTGTGTCAGGACCTACGGGCCAAGGGACAGTCTCAGGTAGACAGTTTCTATGGGGCGTAG
Protein sequenceShow/hide protein sequence
MNGAKRSAEAVGCKNASVGERSALEGSTRASGGGRSGSENVGLSNANIGENPMPRKPKGSSARVRRGRENTSSQCSSTRRYGAEVTHAILPGKARTTFNKRVPVPETDTV
TRPGRLFTKNTGLRKVLRWRAKKAPFRGAEPSVRYHSGRARILTLCQDLRAKGQSQVDSFYGA