; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Moctig00543g110 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoctig00543g110
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionCytochrome b559 subunit alpha
Genome locationtig00000543_pilon:42974..44286
RNA-Seq ExpressionMoctig00543g110
SyntenyMoctig00543g110
Gene Ontology termsGO:0006412 - translation (biological process)
GO:0009767 - photosynthetic electron transport chain (biological process)
GO:0005840 - ribosome (cellular component)
GO:0009535 - chloroplast thylakoid membrane (cellular component)
GO:0009539 - photosystem II reaction center (cellular component)
GO:0016021 - integral component of membrane (cellular component)
GO:0003735 - structural constituent of ribosome (molecular function)
GO:0019843 - rRNA binding (molecular function)
GO:0020037 - heme binding (molecular function)
GO:0046872 - metal ion binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAF4396260.1 hypothetical protein F8388_019806 [Cannabis sativa]1.1e-1842.5Show/hide
Query:  KKDSYTDSVYSENTL--------------------------------EYVELGMSGSTGERSFADIITSIRYWVIHSITIPSLFIA--------------
        KK+SYTDSVYS+ TL                                EY EL M GS GERSFADIITSIRYWVIHSITIPSLFI               
Subjt:  KKDSYTDSVYSENTL--------------------------------EYVELGMSGSTGERSFADIITSIRYWVIHSITIPSLFIA--------------

Query:  --------------------------------ARPLDEMWREVGQMAETTGRIPLWIIGS
                                         R  DEMWR+VGQMA+TTGRIPLWIIG+
Subjt:  --------------------------------ARPLDEMWREVGQMAETTGRIPLWIIGS

PHU30796.1 Cytochrome subunit alpha [Capsicum chinense]1.2e-1790.74Show/hide
Query:  KKDSYTDSVYSENTLEYVELGMSGSTGERSFADIITSIRYWVIHSITIPSLFIA
        KKDSYTDSVYS++ LEYVEL MSGS GERSFADIITSIRYWVIHSITIPSLFIA
Subjt:  KKDSYTDSVYSENTLEYVELGMSGSTGERSFADIITSIRYWVIHSITIPSLFIA

QCE13742.1 photosystem II cytochrome b559 subunit alpha [Vigna unguiculata]5.0e-1994.44Show/hide
Query:  KKDSYTDSVYSENTLEYVELGMSGSTGERSFADIITSIRYWVIHSITIPSLFIA
        KKDSYTDSVYS+NTLEY EL MSGSTGERSFADIITSIRYWVIHSITIPSLFIA
Subjt:  KKDSYTDSVYSENTLEYVELGMSGSTGERSFADIITSIRYWVIHSITIPSLFIA

TYI86979.1 hypothetical protein E1A91_D04G105100v1 [Gossypium mustelinum]3.4e-1561.9Show/hide
Query:  KKDSYTDSVYSENTL-----------------------------EYVELGMSGSTGERSFADIITSIRYWVIHSITIPSLFIAA
        KKDSYTDSVYS+NT                              EYVELGMSGSTGERSFADIITSIRYWVIHSITIPSLFIA+
Subjt:  KKDSYTDSVYSENTL-----------------------------EYVELGMSGSTGERSFADIITSIRYWVIHSITIPSLFIAA

TYI97217.1 hypothetical protein E1A91_D01G127700v1 [Gossypium mustelinum]4.4e-1562.65Show/hide
Query:  KKDSYTDSVYSENTL-----------------------------EYVELGMSGSTGERSFADIITSIRYWVIHSITIPSLFIA
        KKDSYTDSVYS+NT                              EYVELGMSGSTGERSFADIITSIRYWVIHSITIPSLFIA
Subjt:  KKDSYTDSVYSENTL-----------------------------EYVELGMSGSTGERSFADIITSIRYWVIHSITIPSLFIA

TrEMBL top hitse value%identityAlignment
A0A2G3DIH4 Cytochrome b559 subunit alpha6.0e-1890.74Show/hide
Query:  KKDSYTDSVYSENTLEYVELGMSGSTGERSFADIITSIRYWVIHSITIPSLFIA
        KKDSYTDSVYS++ LEYVEL MSGS GERSFADIITSIRYWVIHSITIPSLFIA
Subjt:  KKDSYTDSVYSENTLEYVELGMSGSTGERSFADIITSIRYWVIHSITIPSLFIA

A0A4D6NL22 Cytochrome b559 subunit alpha2.4e-1994.44Show/hide
Query:  KKDSYTDSVYSENTLEYVELGMSGSTGERSFADIITSIRYWVIHSITIPSLFIA
        KKDSYTDSVYS+NTLEY EL MSGSTGERSFADIITSIRYWVIHSITIPSLFIA
Subjt:  KKDSYTDSVYSENTLEYVELGMSGSTGERSFADIITSIRYWVIHSITIPSLFIA

A0A5D2VCD2 Cytochrome b559 subunit alpha1.6e-1561.9Show/hide
Query:  KKDSYTDSVYSENTL-----------------------------EYVELGMSGSTGERSFADIITSIRYWVIHSITIPSLFIAA
        KKDSYTDSVYS+NT                              EYVELGMSGSTGERSFADIITSIRYWVIHSITIPSLFIA+
Subjt:  KKDSYTDSVYSENTL-----------------------------EYVELGMSGSTGERSFADIITSIRYWVIHSITIPSLFIAA

A0A5J5NCB9 Cytochrome b559 subunit alpha2.1e-1562.65Show/hide
Query:  KKDSYTDSVYSENTL-----------------------------EYVELGMSGSTGERSFADIITSIRYWVIHSITIPSLFIA
        KKDSYTDSVYS+NT                              EYVELGMSGSTGERSFADIITSIRYWVIHSITIPSLFIA
Subjt:  KKDSYTDSVYSENTL-----------------------------EYVELGMSGSTGERSFADIITSIRYWVIHSITIPSLFIA

A0A7J6HPK4 Cytochrome b559 subunit alpha5.4e-1942.5Show/hide
Query:  KKDSYTDSVYSENTL--------------------------------EYVELGMSGSTGERSFADIITSIRYWVIHSITIPSLFIA--------------
        KK+SYTDSVYS+ TL                                EY EL M GS GERSFADIITSIRYWVIHSITIPSLFI               
Subjt:  KKDSYTDSVYSENTL--------------------------------EYVELGMSGSTGERSFADIITSIRYWVIHSITIPSLFIA--------------

Query:  --------------------------------ARPLDEMWREVGQMAETTGRIPLWIIGS
                                         R  DEMWR+VGQMA+TTGRIPLWIIG+
Subjt:  --------------------------------ARPLDEMWREVGQMAETTGRIPLWIIGS

SwissProt top hitse value%identityAlignment
A1EA25 Cytochrome b559 subunit alpha4.0e-11100Show/hide
Query:  MSGSTGERSFADIITSIRYWVIHSITIPSLFIA
        MSGSTGERSFADIITSIRYWVIHSITIPSLFIA
Subjt:  MSGSTGERSFADIITSIRYWVIHSITIPSLFIA

P56779 Cytochrome b559 subunit alpha4.0e-11100Show/hide
Query:  MSGSTGERSFADIITSIRYWVIHSITIPSLFIA
        MSGSTGERSFADIITSIRYWVIHSITIPSLFIA
Subjt:  MSGSTGERSFADIITSIRYWVIHSITIPSLFIA

P59702 Cytochrome b559 subunit alpha4.0e-11100Show/hide
Query:  MSGSTGERSFADIITSIRYWVIHSITIPSLFIA
        MSGSTGERSFADIITSIRYWVIHSITIPSLFIA
Subjt:  MSGSTGERSFADIITSIRYWVIHSITIPSLFIA

Q3V518 Cytochrome b559 subunit alpha4.0e-11100Show/hide
Query:  MSGSTGERSFADIITSIRYWVIHSITIPSLFIA
        MSGSTGERSFADIITSIRYWVIHSITIPSLFIA
Subjt:  MSGSTGERSFADIITSIRYWVIHSITIPSLFIA

Q70XY9 Cytochrome b559 subunit alpha4.0e-11100Show/hide
Query:  MSGSTGERSFADIITSIRYWVIHSITIPSLFIA
        MSGSTGERSFADIITSIRYWVIHSITIPSLFIA
Subjt:  MSGSTGERSFADIITSIRYWVIHSITIPSLFIA

Arabidopsis top hitse value%identityAlignment
ATCG00580.1 photosystem II reaction center protein E2.8e-12100Show/hide
Query:  MSGSTGERSFADIITSIRYWVIHSITIPSLFIA
        MSGSTGERSFADIITSIRYWVIHSITIPSLFIA
Subjt:  MSGSTGERSFADIITSIRYWVIHSITIPSLFIA


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAGAAGGATAGCTATACTGATTCGGTATACTCTGAAAACACCCTCGAATATGTGGAGCTCGGCATGTCTGGAAGCACAGGAGAACGTTCTTTTGCTGATATTATCAC
CAGTATTCGATACTGGGTCATTCATAGCATTACTATACCTTCTCTATTCATTGCAGCACGACCACTTGATGAAATGTGGAGGGAAGTGGGACAAATGGCCGAGACTACTG
GAAGGATTCCTCTTTGGATAATAGGTTCATCCCTGTAA
mRNA sequenceShow/hide mRNA sequence
ATGAAGAAGGATAGCTATACTGATTCGGTATACTCTGAAAACACCCTCGAATATGTGGAGCTCGGCATGTCTGGAAGCACAGGAGAACGTTCTTTTGCTGATATTATCAC
CAGTATTCGATACTGGGTCATTCATAGCATTACTATACCTTCTCTATTCATTGCAGCACGACCACTTGATGAAATGTGGAGGGAAGTGGGACAAATGGCCGAGACTACTG
GAAGGATTCCTCTTTGGATAATAGGTTCATCCCTGTAA
Protein sequenceShow/hide protein sequence
MKKDSYTDSVYSENTLEYVELGMSGSTGERSFADIITSIRYWVIHSITIPSLFIAARPLDEMWREVGQMAETTGRIPLWIIGSSL