; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Moctig00544g080 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoctig00544g080
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
Description50S ribosomal protein L16, chloroplastic
Genome locationtig00000544_pilon:40824..41183
RNA-Seq ExpressionMoctig00544g080
SyntenyMoctig00544g080
Gene Ontology termsGO:0006412 - translation (biological process)
GO:0005840 - ribosome (cellular component)
GO:0009507 - chloroplast (cellular component)
GO:0003735 - structural constituent of ribosome (molecular function)
GO:0019843 - rRNA binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
QJA16182.1 ribosomal protein L16 [Siraitia grosvenorii]1.3e-5794.92Show/hide
Query:  MKGLSYRGNRICFGRYAIQALEPGWITSRQIEAGRRAMTRNARRGGKIWVRIFPDKPVTLRPPETRMGSGKGSPGYWVAVVKPGRILYEMGGVAENIARK
        MKG+SYRGNRICFGRYAIQALEP WITSRQIEAGRRAMTRNARRGGKIWVRIFPDKPVTLRP ETRMGSGKGSP YWVAVVKPGRILYEMGGVAENIARK
Subjt:  MKGLSYRGNRICFGRYAIQALEPGWITSRQIEAGRRAMTRNARRGGKIWVRIFPDKPVTLRPPETRMGSGKGSPGYWVAVVKPGRILYEMGGVAENIARK

Query:  AMSIGASKMPIRTQFITS
        A+SI ASKMPIRTQFITS
Subjt:  AMSIGASKMPIRTQFITS

YP_009456098.1 ribosomal protein L16 [Momordica charantia]5.1e-62100Show/hide
Query:  MKGLSYRGNRICFGRYAIQALEPGWITSRQIEAGRRAMTRNARRGGKIWVRIFPDKPVTLRPPETRMGSGKGSPGYWVAVVKPGRILYEMGGVAENIARK
        MKGLSYRGNRICFGRYAIQALEPGWITSRQIEAGRRAMTRNARRGGKIWVRIFPDKPVTLRPPETRMGSGKGSPGYWVAVVKPGRILYEMGGVAENIARK
Subjt:  MKGLSYRGNRICFGRYAIQALEPGWITSRQIEAGRRAMTRNARRGGKIWVRIFPDKPVTLRPPETRMGSGKGSPGYWVAVVKPGRILYEMGGVAENIARK

Query:  AMSIGASKMPIRTQFITSR
        AMSIGASKMPIRTQFITSR
Subjt:  AMSIGASKMPIRTQFITSR

YP_009752195.1 ribosomal protein L16 [Linnaeosicyos amara]1.0e-5794.92Show/hide
Query:  MKGLSYRGNRICFGRYAIQALEPGWITSRQIEAGRRAMTRNARRGGKIWVRIFPDKPVTLRPPETRMGSGKGSPGYWVAVVKPGRILYEMGGVAENIARK
        MKG+SYRGNRICFGRYAIQALEP WITSRQIEAGRRAMTRNARRGGKIWVRIFPDKPVTLRP ETRMGSGKGSP YWVAVVKPGRILYEMGGVAENIARK
Subjt:  MKGLSYRGNRICFGRYAIQALEPGWITSRQIEAGRRAMTRNARRGGKIWVRIFPDKPVTLRPPETRMGSGKGSPGYWVAVVKPGRILYEMGGVAENIARK

Query:  AMSIGASKMPIRTQFITS
        A+SI ASKMPIRTQFITS
Subjt:  AMSIGASKMPIRTQFITS

YP_009752280.1 ribosomal protein L16 [Trichosanthes baviensis]1.3e-5794.92Show/hide
Query:  MKGLSYRGNRICFGRYAIQALEPGWITSRQIEAGRRAMTRNARRGGKIWVRIFPDKPVTLRPPETRMGSGKGSPGYWVAVVKPGRILYEMGGVAENIARK
        MKG+SYRGNRICFGRYAIQALEP WITSRQIEAGRRAMTRNARRGGKIWVRIFPDKPVTLRP ETRMGSGKGSP YWVAVVKPGRILYEMGGVAENIARK
Subjt:  MKGLSYRGNRICFGRYAIQALEPGWITSRQIEAGRRAMTRNARRGGKIWVRIFPDKPVTLRPPETRMGSGKGSPGYWVAVVKPGRILYEMGGVAENIARK

Query:  AMSIGASKMPIRTQFITS
        A+SI ASKMPIRTQFITS
Subjt:  AMSIGASKMPIRTQFITS

YP_009752703.1 ribosomal protein L16 [Ampelosycios humblotii]1.3e-5794.92Show/hide
Query:  MKGLSYRGNRICFGRYAIQALEPGWITSRQIEAGRRAMTRNARRGGKIWVRIFPDKPVTLRPPETRMGSGKGSPGYWVAVVKPGRILYEMGGVAENIARK
        MKG+SYRGNRICFGRYAIQALEP WITSRQIEAGRRAMTRNARRGGKIWVRIFPDKPVTLRP ETRMGSGKGSP YWVAVVKPGRILYEMGGVAENIARK
Subjt:  MKGLSYRGNRICFGRYAIQALEPGWITSRQIEAGRRAMTRNARRGGKIWVRIFPDKPVTLRPPETRMGSGKGSPGYWVAVVKPGRILYEMGGVAENIARK

Query:  AMSIGASKMPIRTQFITS
        A+SI ASKMPIRTQFITS
Subjt:  AMSIGASKMPIRTQFITS

TrEMBL top hitse value%identityAlignment
A0A2I6C017 50S ribosomal protein L16, chloroplastic2.5e-62100Show/hide
Query:  MKGLSYRGNRICFGRYAIQALEPGWITSRQIEAGRRAMTRNARRGGKIWVRIFPDKPVTLRPPETRMGSGKGSPGYWVAVVKPGRILYEMGGVAENIARK
        MKGLSYRGNRICFGRYAIQALEPGWITSRQIEAGRRAMTRNARRGGKIWVRIFPDKPVTLRPPETRMGSGKGSPGYWVAVVKPGRILYEMGGVAENIARK
Subjt:  MKGLSYRGNRICFGRYAIQALEPGWITSRQIEAGRRAMTRNARRGGKIWVRIFPDKPVTLRPPETRMGSGKGSPGYWVAVVKPGRILYEMGGVAENIARK

Query:  AMSIGASKMPIRTQFITSR
        AMSIGASKMPIRTQFITSR
Subjt:  AMSIGASKMPIRTQFITSR

A0A514YKW7 50S ribosomal protein L16, chloroplastic6.3e-5894.92Show/hide
Query:  MKGLSYRGNRICFGRYAIQALEPGWITSRQIEAGRRAMTRNARRGGKIWVRIFPDKPVTLRPPETRMGSGKGSPGYWVAVVKPGRILYEMGGVAENIARK
        MKG+SYRGNRICFGRYAIQALEP WITSRQIEAGRRAMTRNARRGGKIWVRIFPDKPVTLRP ETRMGSGKGSP YWVAVVKPGRILYEMGGVAENIARK
Subjt:  MKGLSYRGNRICFGRYAIQALEPGWITSRQIEAGRRAMTRNARRGGKIWVRIFPDKPVTLRPPETRMGSGKGSPGYWVAVVKPGRILYEMGGVAENIARK

Query:  AMSIGASKMPIRTQFITS
        A+SI ASKMPIRTQFITS
Subjt:  AMSIGASKMPIRTQFITS

A0A6H0ESK3 50S ribosomal protein L16, chloroplastic6.3e-5894.92Show/hide
Query:  MKGLSYRGNRICFGRYAIQALEPGWITSRQIEAGRRAMTRNARRGGKIWVRIFPDKPVTLRPPETRMGSGKGSPGYWVAVVKPGRILYEMGGVAENIARK
        MKG+SYRGNRICFGRYAIQALEP WITSRQIEAGRRAMTRNARRGGKIWVRIFPDKPVTLRP ETRMGSGKGSP YWVAVVKPGRILYEMGGVAENIARK
Subjt:  MKGLSYRGNRICFGRYAIQALEPGWITSRQIEAGRRAMTRNARRGGKIWVRIFPDKPVTLRPPETRMGSGKGSPGYWVAVVKPGRILYEMGGVAENIARK

Query:  AMSIGASKMPIRTQFITS
        A+SI ASKMPIRTQFITS
Subjt:  AMSIGASKMPIRTQFITS

A0A6H0EUT5 50S ribosomal protein L16, chloroplastic4.9e-5894.92Show/hide
Query:  MKGLSYRGNRICFGRYAIQALEPGWITSRQIEAGRRAMTRNARRGGKIWVRIFPDKPVTLRPPETRMGSGKGSPGYWVAVVKPGRILYEMGGVAENIARK
        MKG+SYRGNRICFGRYAIQALEP WITSRQIEAGRRAMTRNARRGGKIWVRIFPDKPVTLRP ETRMGSGKGSP YWVAVVKPGRILYEMGGVAENIARK
Subjt:  MKGLSYRGNRICFGRYAIQALEPGWITSRQIEAGRRAMTRNARRGGKIWVRIFPDKPVTLRPPETRMGSGKGSPGYWVAVVKPGRILYEMGGVAENIARK

Query:  AMSIGASKMPIRTQFITS
        A+SI ASKMPIRTQFITS
Subjt:  AMSIGASKMPIRTQFITS

A0A6M3RTV2 50S ribosomal protein L16, chloroplastic6.3e-5894.92Show/hide
Query:  MKGLSYRGNRICFGRYAIQALEPGWITSRQIEAGRRAMTRNARRGGKIWVRIFPDKPVTLRPPETRMGSGKGSPGYWVAVVKPGRILYEMGGVAENIARK
        MKG+SYRGNRICFGRYAIQALEP WITSRQIEAGRRAMTRNARRGGKIWVRIFPDKPVTLRP ETRMGSGKGSP YWVAVVKPGRILYEMGGVAENIARK
Subjt:  MKGLSYRGNRICFGRYAIQALEPGWITSRQIEAGRRAMTRNARRGGKIWVRIFPDKPVTLRPPETRMGSGKGSPGYWVAVVKPGRILYEMGGVAENIARK

Query:  AMSIGASKMPIRTQFITS
        A+SI ASKMPIRTQFITS
Subjt:  AMSIGASKMPIRTQFITS

SwissProt top hitse value%identityAlignment
B1NWI7 50S ribosomal protein L16, chloroplastic9.4e-5991.53Show/hide
Query:  MKGLSYRGNRICFGRYAIQALEPGWITSRQIEAGRRAMTRNARRGGKIWVRIFPDKPVTLRPPETRMGSGKGSPGYWVAVVKPGRILYEMGGVAENIARK
        MKG+++RGNRICFGRYA+QALEP WITSRQIEAGRRAMTRNARRGGKIWVRIFPDKPVTLRP ETRMGSGKGSP YWVAVVKPGRILYEMGGVAENIARK
Subjt:  MKGLSYRGNRICFGRYAIQALEPGWITSRQIEAGRRAMTRNARRGGKIWVRIFPDKPVTLRPPETRMGSGKGSPGYWVAVVKPGRILYEMGGVAENIARK

Query:  AMSIGASKMPIRTQFITS
        A+SI ASKMPIRTQFI S
Subjt:  AMSIGASKMPIRTQFITS

Q09ME0 50S ribosomal protein L16, chloroplastic8.0e-5890.68Show/hide
Query:  MKGLSYRGNRICFGRYAIQALEPGWITSRQIEAGRRAMTRNARRGGKIWVRIFPDKPVTLRPPETRMGSGKGSPGYWVAVVKPGRILYEMGGVAENIARK
        MKG+SYRGN ICFGRYA+QALEP WITSRQIEAGRRAMTRN RRGGKIWVRIFPDKPVTLRP ETRMGSGKGSP YWVAVVKPGRILYEM GVAENIARK
Subjt:  MKGLSYRGNRICFGRYAIQALEPGWITSRQIEAGRRAMTRNARRGGKIWVRIFPDKPVTLRPPETRMGSGKGSPGYWVAVVKPGRILYEMGGVAENIARK

Query:  AMSIGASKMPIRTQFITS
        A+SI ASKMPIRTQFI S
Subjt:  AMSIGASKMPIRTQFITS

Q0ZIY1 50S ribosomal protein L16, chloroplastic9.4e-5991.53Show/hide
Query:  MKGLSYRGNRICFGRYAIQALEPGWITSRQIEAGRRAMTRNARRGGKIWVRIFPDKPVTLRPPETRMGSGKGSPGYWVAVVKPGRILYEMGGVAENIARK
        MKG+SYRGNRICFGRYA+QALEP WITSRQIEAGRRAMTRN RRGGKIWVRIFPDKPVT+RP ETRMGSGKGSP YWVAVVKPGRILYEMGGVAENIARK
Subjt:  MKGLSYRGNRICFGRYAIQALEPGWITSRQIEAGRRAMTRNARRGGKIWVRIFPDKPVTLRPPETRMGSGKGSPGYWVAVVKPGRILYEMGGVAENIARK

Query:  AMSIGASKMPIRTQFITS
        A+SI ASKMPIRTQFI S
Subjt:  AMSIGASKMPIRTQFITS

Q49KW1 50S ribosomal protein L16, chloroplastic2.1e-5890.68Show/hide
Query:  MKGLSYRGNRICFGRYAIQALEPGWITSRQIEAGRRAMTRNARRGGKIWVRIFPDKPVTLRPPETRMGSGKGSPGYWVAVVKPGRILYEMGGVAENIARK
        MKG+SYRGNRICFG+YA+QALEP WITSRQIEAGRRAMTRN RRGGKIWVRIFPDKPVT+RP ETRMGSGKGSP YWVAVVKPGRILYEMGGVAENIARK
Subjt:  MKGLSYRGNRICFGRYAIQALEPGWITSRQIEAGRRAMTRNARRGGKIWVRIFPDKPVTLRPPETRMGSGKGSPGYWVAVVKPGRILYEMGGVAENIARK

Query:  AMSIGASKMPIRTQFITS
        A+SI ASKMPIRTQFI S
Subjt:  AMSIGASKMPIRTQFITS

Q4VZN1 50S ribosomal protein L16, chloroplastic4.2e-5993.22Show/hide
Query:  MKGLSYRGNRICFGRYAIQALEPGWITSRQIEAGRRAMTRNARRGGKIWVRIFPDKPVTLRPPETRMGSGKGSPGYWVAVVKPGRILYEMGGVAENIARK
        MKG+SYRGN ICFGRYAIQALEP WITSRQIEAGRRAMTRNARRGGKIWVRIFPDKPVTLRP ETRMGSGKGSP YWVAVVKPGRILYEM GVAENIARK
Subjt:  MKGLSYRGNRICFGRYAIQALEPGWITSRQIEAGRRAMTRNARRGGKIWVRIFPDKPVTLRPPETRMGSGKGSPGYWVAVVKPGRILYEMGGVAENIARK

Query:  AMSIGASKMPIRTQFITS
        A+SI ASKMPIRTQFITS
Subjt:  AMSIGASKMPIRTQFITS

Arabidopsis top hitse value%identityAlignment
AT2G28830.1 PLANT U-BOX 121.8e-4168.64Show/hide
Query:  KGLSYRGNRICFGRYAIQALEPGWITSRQIEAGRRAMTRNARRGGKIWVRIFPDKPVTLRPPETRMGSGKGSPGYWVAVVKPGRILYEMGGVAENIARKA
        KG+S +G  IC  RYA+Q LEP WITSRQIEAGRRAMTRN  RG  + V IF DKPVT+RPPETRMG GKG+P +WVAVVKPG+I+YEMGGV+E +AR+A
Subjt:  KGLSYRGNRICFGRYAIQALEPGWITSRQIEAGRRAMTRNARRGGKIWVRIFPDKPVTLRPPETRMGSGKGSPGYWVAVVKPGRILYEMGGVAENIARKA

Query:  MSIGASKMPIRTQFITSR
        +SI ASK+P +T+FI S+
Subjt:  MSIGASKMPIRTQFITSR

ATCG00790.1 ribosomal protein L169.1e-5786.44Show/hide
Query:  MKGLSYRGNRICFGRYAIQALEPGWITSRQIEAGRRAMTRNARRGGKIWVRIFPDKPVTLRPPETRMGSGKGSPGYWVAVVKPGRILYEMGGVAENIARK
        +KG+S RGNRICFGRYA+Q LEP WITSRQIEAGRRAMTRN RRGGKIWVRIFPDKPVT+RP ETRMGSGKGSP YWVAVVKPG+ILYEMGGV ENIARK
Subjt:  MKGLSYRGNRICFGRYAIQALEPGWITSRQIEAGRRAMTRNARRGGKIWVRIFPDKPVTLRPPETRMGSGKGSPGYWVAVVKPGRILYEMGGVAENIARK

Query:  AMSIGASKMPIRTQFITS
        A+SI ASKMPI+TQFI S
Subjt:  AMSIGASKMPIRTQFITS

ATMG00080.1 ribosomal protein L162.1e-2142.28Show/hide
Query:  KGLSYRGNRICFGRYAIQALEPGWITSRQIEAGR--------RAMTRNARRGGKIWVRIFPDKPVTLRPPETRMGSGKGSPGYWVAVVKPGRILYEMGGV
        +G    G ++ FGRY  ++ + G ++ R IEA R        RAM+   RR GKIWVR+F D P+T +P E RMG GKG+P  W+A V  G+I +EM GV
Subjt:  KGLSYRGNRICFGRYAIQALEPGWITSRQIEAGR--------RAMTRNARRGGKIWVRIFPDKPVTLRPPETRMGSGKGSPGYWVAVVKPGRILYEMGGV

Query:  AENIARKAMSIGASKMPIRTQFI
        +   AR+A ++ A K    T+F+
Subjt:  AENIARKAMSIGASKMPIRTQFI


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAAGGACTATCTTATCGAGGCAATCGTATTTGCTTCGGTAGATACGCTATTCAGGCACTTGAACCCGGTTGGATCACATCTAGACAAATCGAAGCGGGACGAAGGGC
AATGACACGAAATGCACGACGCGGCGGAAAAATATGGGTACGTATATTTCCAGACAAACCCGTTACACTAAGACCTCCAGAAACACGTATGGGTTCAGGCAAAGGATCCC
CCGGATATTGGGTAGCTGTTGTTAAACCAGGTAGAATACTTTATGAAATGGGTGGAGTAGCAGAAAATATAGCCAGAAAGGCTATGTCAATAGGGGCGTCTAAAATGCCT
ATACGAACCCAATTCATTACTTCGCGATAG
mRNA sequenceShow/hide mRNA sequence
ATGAAAGGACTATCTTATCGAGGCAATCGTATTTGCTTCGGTAGATACGCTATTCAGGCACTTGAACCCGGTTGGATCACATCTAGACAAATCGAAGCGGGACGAAGGGC
AATGACACGAAATGCACGACGCGGCGGAAAAATATGGGTACGTATATTTCCAGACAAACCCGTTACACTAAGACCTCCAGAAACACGTATGGGTTCAGGCAAAGGATCCC
CCGGATATTGGGTAGCTGTTGTTAAACCAGGTAGAATACTTTATGAAATGGGTGGAGTAGCAGAAAATATAGCCAGAAAGGCTATGTCAATAGGGGCGTCTAAAATGCCT
ATACGAACCCAATTCATTACTTCGCGATAG
Protein sequenceShow/hide protein sequence
MKGLSYRGNRICFGRYAIQALEPGWITSRQIEAGRRAMTRNARRGGKIWVRIFPDKPVTLRPPETRMGSGKGSPGYWVAVVKPGRILYEMGGVAENIARKAMSIGASKMP
IRTQFITSR