; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

PI0000002 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0000002
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionTHO complex subunit 4A-like
Genome locationchr11:6487894..6492191
RNA-Seq ExpressionPI0000002
SyntenyPI0000002
Gene Ontology termsGO:0006406 - mRNA export from nucleus (biological process)
GO:0005634 - nucleus (cellular component)
GO:0003729 - mRNA binding (molecular function)
InterPro domainsIPR000504 - RNA recognition motif domain
IPR012677 - Nucleotide-binding alpha-beta plait domain superfamily
IPR025715 - Chromatin target of PRMT1 protein, C-terminal
IPR035979 - RNA-binding domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7035419.1 THO complex subunit 4A, partial [Cucurbita argyrosperma subsp. argyrosperma]3.0e-11492.44Show/hide
Query:  MAAPLDMSLDDIIKNNKKSRSGNSRGRGRGSGPGPVRRFPNRAANRTPYSAPKAPETTWQHDMFADPSSGFPVQGGRASAIQTGTKLYISNLDYGVSNED
        MAAPLDMSLDDIIKNNKKSRSG SRGRGRGSGPGPVRR PNRAANRTPYSAPKAPETTWQHDMF D  +GFPVQ GRAS+IQTGTKLYISNLDYGVSNED
Subjt:  MAAPLDMSLDDIIKNNKKSRSGNSRGRGRGSGPGPVRRFPNRAANRTPYSAPKAPETTWQHDMFADPSSGFPVQGGRASAIQTGTKLYISNLDYGVSNED

Query:  IKELFSEVGDMKRHGIHYDKSGRSKGTAEVVFSRRLDAVAAVKKYNNVQLDGKPMKIEIVGTNISTPAVNPTAAVNPFENSNGAPRRQQGRGGLPSRQR-
        IKELFSEVGDMKR+GIHYDKSGRSKGTAEVVFSRR DA AAVKKYNNVQLDGKPMKIEIVGTNI+T AV P AAVNPFEN NGAPRRQQGRGGLPSRQR 
Subjt:  IKELFSEVGDMKRHGIHYDKSGRSKGTAEVVFSRRLDAVAAVKKYNNVQLDGKPMKIEIVGTNISTPAVNPTAAVNPFENSNGAPRRQQGRGGLPSRQR-

Query:  GRGFGRGRGRGRGPSEKVSAEDLDADLEKYHAESMQIN
        GRG GRGRGRGRGPSEKVSAEDLDADLEKYHAESMQIN
Subjt:  GRGFGRGRGRGRGPSEKVSAEDLDADLEKYHAESMQIN

XP_004143092.1 THO complex subunit 4A [Cucumis sativus]7.2e-12498.31Show/hide
Query:  MAAPLDMSLDDIIKNNKKSRSGNSRGRGRGSGPGPVRRFPNRAANRTPYSAPKAPETTWQHDMFADPSSGFPVQGGRASAIQTGTKLYISNLDYGVSNED
        MAAPLDMSLDDIIKNNKKSRSGNSRGRGRGSGPGPVRRFPNRAANRTPYSAPKAPETTWQHDMFADPSSGF VQGGRASAIQTGTKLYISNLDYGVSNED
Subjt:  MAAPLDMSLDDIIKNNKKSRSGNSRGRGRGSGPGPVRRFPNRAANRTPYSAPKAPETTWQHDMFADPSSGFPVQGGRASAIQTGTKLYISNLDYGVSNED

Query:  IKELFSEVGDMKRHGIHYDKSGRSKGTAEVVFSRRLDAVAAVKKYNNVQLDGKPMKIEIVGTNISTPAVNPTAAVNPFENSNGAPRRQQGRGGLPSRQRG
        IKELFSEVGDMKRHGIHYDKSGRSKGTAEVVFSRRLDAVAAVKKYNNVQLDGKPMKIEIVGTNISTPAV PTAAVNPFENSNGAPRRQQGRGG PSRQRG
Subjt:  IKELFSEVGDMKRHGIHYDKSGRSKGTAEVVFSRRLDAVAAVKKYNNVQLDGKPMKIEIVGTNISTPAVNPTAAVNPFENSNGAPRRQQGRGGLPSRQRG

Query:  RGFGRGRGRGRGPSEKVSAEDLDADLEKYHAESMQIN
         GFGRGRGRGRGPSEKVSAEDLDADLEKYHAESMQIN
Subjt:  RGFGRGRGRGRGPSEKVSAEDLDADLEKYHAESMQIN

XP_008448384.1 PREDICTED: THO complex subunit 4A-like isoform X1 [Cucumis melo]4.7e-12397.89Show/hide
Query:  MAAPLDMSLDDIIKNNKKSRSGNSRGRGRGSGPGPVRRFPNRAANRTPYSAPKAPETTWQHDMFADPSSGFPVQGGRASAIQTGTKLYISNLDYGVSNED
        MAAPLDMSLDDIIKNNKKSRSGNSRGRGRGSGPGPVRRFPNRAA+RTPYSAPKAPETTWQHDMFADPSSGF  QGGRASAIQTGTKLYISNLDYGVSNED
Subjt:  MAAPLDMSLDDIIKNNKKSRSGNSRGRGRGSGPGPVRRFPNRAANRTPYSAPKAPETTWQHDMFADPSSGFPVQGGRASAIQTGTKLYISNLDYGVSNED

Query:  IKELFSEVGDMKRHGIHYDKSGRSKGTAEVVFSRRLDAVAAVKKYNNVQLDGKPMKIEIVGTNISTPAVNPTAAVNPFENSNGAPRRQQGRGGLPSRQRG
        IKELFSEVGDMKRHGIHYDKSGRSKGTAEVVFSRRLDAVAAVKKYNNVQLDGKPMKIEIVGTNISTPAV PTAAVNPFENSNGAPRRQQGRGG PSRQRG
Subjt:  IKELFSEVGDMKRHGIHYDKSGRSKGTAEVVFSRRLDAVAAVKKYNNVQLDGKPMKIEIVGTNISTPAVNPTAAVNPFENSNGAPRRQQGRGGLPSRQRG

Query:  RGFGRGRGRGRGPSEKVSAEDLDADLEKYHAESMQIN
        RGFGRGRGRGRGPSEKVSAEDLDADLEKYHAESMQIN
Subjt:  RGFGRGRGRGRGPSEKVSAEDLDADLEKYHAESMQIN

XP_022947495.1 THO complex subunit 4A-like [Cucurbita moschata]3.0e-11492.44Show/hide
Query:  MAAPLDMSLDDIIKNNKKSRSGNSRGRGRGSGPGPVRRFPNRAANRTPYSAPKAPETTWQHDMFADPSSGFPVQGGRASAIQTGTKLYISNLDYGVSNED
        MAAPLDMSLDDIIKNNKKSRSG SRGRGRGSGPGPVRR PNRAANRTPYSAPKAPETTWQHDMF D  +GFPVQ GRAS+IQTGTKLYISNLDYGVSNED
Subjt:  MAAPLDMSLDDIIKNNKKSRSGNSRGRGRGSGPGPVRRFPNRAANRTPYSAPKAPETTWQHDMFADPSSGFPVQGGRASAIQTGTKLYISNLDYGVSNED

Query:  IKELFSEVGDMKRHGIHYDKSGRSKGTAEVVFSRRLDAVAAVKKYNNVQLDGKPMKIEIVGTNISTPAVNPTAAVNPFENSNGAPRRQQGRGGLPSRQR-
        IKELFSEVGDMKR+GIHYDKSGRSKGTAEVVFSRR DA AAVKKYNNVQLDGKPMKIEIVGTNI+T AV P AAVNPFEN NGAPRRQQGRGGLPSRQR 
Subjt:  IKELFSEVGDMKRHGIHYDKSGRSKGTAEVVFSRRLDAVAAVKKYNNVQLDGKPMKIEIVGTNISTPAVNPTAAVNPFENSNGAPRRQQGRGGLPSRQR-

Query:  GRGFGRGRGRGRGPSEKVSAEDLDADLEKYHAESMQIN
        GRG GRGRGRGRGPSEKVSAEDLDADLEKYHAESMQIN
Subjt:  GRGFGRGRGRGRGPSEKVSAEDLDADLEKYHAESMQIN

XP_038901991.1 THO complex subunit 4A-like [Benincasa hispida]5.2e-12297.05Show/hide
Query:  MAAPLDMSLDDIIKNNKKSRSGNSRGRGRGSGPGPVRRFPNRAANRTPYSAPKAPETTWQHDMFADPSSGFPVQGGRASAIQTGTKLYISNLDYGVSNED
        MAAPLDMSLDDIIKNNKKSRSGNSRGRGRGSGPGPVRRFPNRAANRTPYSAPKAPETTWQHDMFADP SGF  QGGRASAIQTGTKLYISNLDYGVSNED
Subjt:  MAAPLDMSLDDIIKNNKKSRSGNSRGRGRGSGPGPVRRFPNRAANRTPYSAPKAPETTWQHDMFADPSSGFPVQGGRASAIQTGTKLYISNLDYGVSNED

Query:  IKELFSEVGDMKRHGIHYDKSGRSKGTAEVVFSRRLDAVAAVKKYNNVQLDGKPMKIEIVGTNISTPAVNPTAAVNPFENSNGAPRRQQGRGGLPSRQRG
        IKELFSEVGDMKR+GIHYDKSGRSKGTAEVVFSRRLDAVAAVKKYNNVQLDGKPMKIEIVGTNISTPAV PTAAVNPFEN NGAPRRQQGRGG PSRQRG
Subjt:  IKELFSEVGDMKRHGIHYDKSGRSKGTAEVVFSRRLDAVAAVKKYNNVQLDGKPMKIEIVGTNISTPAVNPTAAVNPFENSNGAPRRQQGRGGLPSRQRG

Query:  RGFGRGRGRGRGPSEKVSAEDLDADLEKYHAESMQIN
        RGFGRGRGRGRGPSEKVSAEDLDADLEKYHAESMQIN
Subjt:  RGFGRGRGRGRGPSEKVSAEDLDADLEKYHAESMQIN

TrEMBL top hitse value%identityAlignment
A0A0A0KBU2 RRM domain-containing protein3.5e-12498.31Show/hide
Query:  MAAPLDMSLDDIIKNNKKSRSGNSRGRGRGSGPGPVRRFPNRAANRTPYSAPKAPETTWQHDMFADPSSGFPVQGGRASAIQTGTKLYISNLDYGVSNED
        MAAPLDMSLDDIIKNNKKSRSGNSRGRGRGSGPGPVRRFPNRAANRTPYSAPKAPETTWQHDMFADPSSGF VQGGRASAIQTGTKLYISNLDYGVSNED
Subjt:  MAAPLDMSLDDIIKNNKKSRSGNSRGRGRGSGPGPVRRFPNRAANRTPYSAPKAPETTWQHDMFADPSSGFPVQGGRASAIQTGTKLYISNLDYGVSNED

Query:  IKELFSEVGDMKRHGIHYDKSGRSKGTAEVVFSRRLDAVAAVKKYNNVQLDGKPMKIEIVGTNISTPAVNPTAAVNPFENSNGAPRRQQGRGGLPSRQRG
        IKELFSEVGDMKRHGIHYDKSGRSKGTAEVVFSRRLDAVAAVKKYNNVQLDGKPMKIEIVGTNISTPAV PTAAVNPFENSNGAPRRQQGRGG PSRQRG
Subjt:  IKELFSEVGDMKRHGIHYDKSGRSKGTAEVVFSRRLDAVAAVKKYNNVQLDGKPMKIEIVGTNISTPAVNPTAAVNPFENSNGAPRRQQGRGGLPSRQRG

Query:  RGFGRGRGRGRGPSEKVSAEDLDADLEKYHAESMQIN
         GFGRGRGRGRGPSEKVSAEDLDADLEKYHAESMQIN
Subjt:  RGFGRGRGRGRGPSEKVSAEDLDADLEKYHAESMQIN

A0A1S3BK70 THO complex subunit 4A-like isoform X12.3e-12397.89Show/hide
Query:  MAAPLDMSLDDIIKNNKKSRSGNSRGRGRGSGPGPVRRFPNRAANRTPYSAPKAPETTWQHDMFADPSSGFPVQGGRASAIQTGTKLYISNLDYGVSNED
        MAAPLDMSLDDIIKNNKKSRSGNSRGRGRGSGPGPVRRFPNRAA+RTPYSAPKAPETTWQHDMFADPSSGF  QGGRASAIQTGTKLYISNLDYGVSNED
Subjt:  MAAPLDMSLDDIIKNNKKSRSGNSRGRGRGSGPGPVRRFPNRAANRTPYSAPKAPETTWQHDMFADPSSGFPVQGGRASAIQTGTKLYISNLDYGVSNED

Query:  IKELFSEVGDMKRHGIHYDKSGRSKGTAEVVFSRRLDAVAAVKKYNNVQLDGKPMKIEIVGTNISTPAVNPTAAVNPFENSNGAPRRQQGRGGLPSRQRG
        IKELFSEVGDMKRHGIHYDKSGRSKGTAEVVFSRRLDAVAAVKKYNNVQLDGKPMKIEIVGTNISTPAV PTAAVNPFENSNGAPRRQQGRGG PSRQRG
Subjt:  IKELFSEVGDMKRHGIHYDKSGRSKGTAEVVFSRRLDAVAAVKKYNNVQLDGKPMKIEIVGTNISTPAVNPTAAVNPFENSNGAPRRQQGRGGLPSRQRG

Query:  RGFGRGRGRGRGPSEKVSAEDLDADLEKYHAESMQIN
        RGFGRGRGRGRGPSEKVSAEDLDADLEKYHAESMQIN
Subjt:  RGFGRGRGRGRGPSEKVSAEDLDADLEKYHAESMQIN

A0A6J1D4W8 THO complex subunit 4A-like2.3e-11290.12Show/hide
Query:  MAAPLDMSLDDIIKNNKKSRSGNSR-GRGRGSGPGPVRRFPNRAANRTPYSAPKAPETTWQHDMFADPSSGFPVQGGRASAIQTGTKLYISNLDYGVSNE
        MAAPLDMSLDDIIKNNKKSRSGNSR GRGR SGPGPVRRFPNRAANRTPY+APKAPET WQHDMF D +SGF VQ GRASAIQTGTKLYISNLDYGVSNE
Subjt:  MAAPLDMSLDDIIKNNKKSRSGNSR-GRGRGSGPGPVRRFPNRAANRTPYSAPKAPETTWQHDMFADPSSGFPVQGGRASAIQTGTKLYISNLDYGVSNE

Query:  DIKELFSEVGDMKRHGIHYDKSGRSKGTAEVVFSRRLDAVAAVKKYNNVQLDGKPMKIEIVGTNISTPAVNPTAAVNPFENSNGAPRRQQGRGGLPSRQR
        DIKELFSEVGDMK + IHYDKSGRSKGTAEVVFSRR+DAVAAVKKYNNVQLDGKPMKIEIVGTNI+TPA  PTAAV PFEN NG PRRQQGRGGLPSRQR
Subjt:  DIKELFSEVGDMKRHGIHYDKSGRSKGTAEVVFSRRLDAVAAVKKYNNVQLDGKPMKIEIVGTNISTPAVNPTAAVNPFENSNGAPRRQQGRGGLPSRQR

Query:  -----GRGFGRGRGRGRGPSEKVSAEDLDADLEKYHAESMQIN
             GRGFGRGRGRGRGPSEKVSAEDLDADLEKYHAESMQIN
Subjt:  -----GRGFGRGRGRGRGPSEKVSAEDLDADLEKYHAESMQIN

A0A6J1G721 THO complex subunit 4A-like1.5e-11492.44Show/hide
Query:  MAAPLDMSLDDIIKNNKKSRSGNSRGRGRGSGPGPVRRFPNRAANRTPYSAPKAPETTWQHDMFADPSSGFPVQGGRASAIQTGTKLYISNLDYGVSNED
        MAAPLDMSLDDIIKNNKKSRSG SRGRGRGSGPGPVRR PNRAANRTPYSAPKAPETTWQHDMF D  +GFPVQ GRAS+IQTGTKLYISNLDYGVSNED
Subjt:  MAAPLDMSLDDIIKNNKKSRSGNSRGRGRGSGPGPVRRFPNRAANRTPYSAPKAPETTWQHDMFADPSSGFPVQGGRASAIQTGTKLYISNLDYGVSNED

Query:  IKELFSEVGDMKRHGIHYDKSGRSKGTAEVVFSRRLDAVAAVKKYNNVQLDGKPMKIEIVGTNISTPAVNPTAAVNPFENSNGAPRRQQGRGGLPSRQR-
        IKELFSEVGDMKR+GIHYDKSGRSKGTAEVVFSRR DA AAVKKYNNVQLDGKPMKIEIVGTNI+T AV P AAVNPFEN NGAPRRQQGRGGLPSRQR 
Subjt:  IKELFSEVGDMKRHGIHYDKSGRSKGTAEVVFSRRLDAVAAVKKYNNVQLDGKPMKIEIVGTNISTPAVNPTAAVNPFENSNGAPRRQQGRGGLPSRQR-

Query:  GRGFGRGRGRGRGPSEKVSAEDLDADLEKYHAESMQIN
        GRG GRGRGRGRGPSEKVSAEDLDADLEKYHAESMQIN
Subjt:  GRGFGRGRGRGRGPSEKVSAEDLDADLEKYHAESMQIN

A0A6J1L1M6 THO complex subunit 4A-like4.3e-11492.02Show/hide
Query:  MAAPLDMSLDDIIKNNKKSRSGNSRGRGRGSGPGPVRRFPNRAANRTPYSAPKAPETTWQHDMFADPSSGFPVQGGRASAIQTGTKLYISNLDYGVSNED
        MAAPLDMSLDDIIKNNKKSRSG SRGRGRGSGPGPVRR PNRAANRTPYSAPKAPETTWQHDMF D  +GFPVQ GRAS+IQTGTKLYISNLDYGVSNED
Subjt:  MAAPLDMSLDDIIKNNKKSRSGNSRGRGRGSGPGPVRRFPNRAANRTPYSAPKAPETTWQHDMFADPSSGFPVQGGRASAIQTGTKLYISNLDYGVSNED

Query:  IKELFSEVGDMKRHGIHYDKSGRSKGTAEVVFSRRLDAVAAVKKYNNVQLDGKPMKIEIVGTNISTPAVNPTAAVNPFENSNGAPRRQQGRGGLPSRQR-
        IKELFSEVGDMKR+GIHYDKSGRSKGTAEVVFSRR DA AAVKKYNNVQLDGKPMKIEIVGTNI+T AV P AAVNPFEN NG PRRQQGRGGLPSRQR 
Subjt:  IKELFSEVGDMKRHGIHYDKSGRSKGTAEVVFSRRLDAVAAVKKYNNVQLDGKPMKIEIVGTNISTPAVNPTAAVNPFENSNGAPRRQQGRGGLPSRQR-

Query:  GRGFGRGRGRGRGPSEKVSAEDLDADLEKYHAESMQIN
        GRG GRGRGRGRGPSEKVSAEDLDADLEKYHAESMQIN
Subjt:  GRGFGRGRGRGRGPSEKVSAEDLDADLEKYHAESMQIN

SwissProt top hitse value%identityAlignment
O08583 THO complex subunit 42.1e-4143.41Show/hide
Query:  MAAPLDMSLDDIIKNNKKSRSGNSRGRGRG-------------------SGPGPVRRFPNRA-------ANR-TPYSAPKAPETTWQHDMFADPSSGFPV
        MA  +DMSLDDIIK N+  R G   GRGRG                    G GP+R  P  A        NR  PYS PK     WQHD+F    SGF  
Subjt:  MAAPLDMSLDDIIKNNKKSRSGNSRGRGRG-------------------SGPGPVRRFPNRA-------ANR-TPYSAPKAPETTWQHDMFADPSSGFPV

Query:  QGGRASAIQTGTKLYISNLDYGVSNEDIKELFSEVGDMKRHGIHYDKSGRSKGTAEVVFSRRLDAVAAVKKYNNVQLDGKPMKIEIVGTNISTPAVNPTA
          G  + ++TG KL +SNLD+GVS+ DI+ELF+E G +K+  +HYD+SGRS GTA+V F R+ DA+ A+K+YN V LDG+PM I++V + I T    P  
Subjt:  QGGRASAIQTGTKLYISNLDYGVSNEDIKELFSEVGDMKRHGIHYDKSGRSKGTAEVVFSRRLDAVAAVKKYNNVQLDGKPMKIEIVGTNISTPAVNPTA

Query:  AVNPFENSNGAPRRQQGRGGLPSRQRGRGFGRGRGRGRGPSEKVSAEDLDADLEKYHA
        ++N    +        G GG     RG   GRGRG GR   +++SAE+LDA L+ Y+A
Subjt:  AVNPFENSNGAPRRQQGRGGLPSRQRGRGFGRGRGRGRGPSEKVSAEDLDADLEKYHA

Q3T0I4 THO complex subunit 41.2e-4144.53Show/hide
Query:  MAAPLDMSLDDIIKNNKKSRSGNSRGRGRG-------------------SGPGPVRRFPNRA--------ANR-TPYSAPKAPETTWQHDMFADPSSGFP
        MA  +DMSLDDIIK N+  R G   GRGRG                    G GP+R  P  A         NR  PYS PK     WQHD+F    SGF 
Subjt:  MAAPLDMSLDDIIKNNKKSRSGNSRGRGRG-------------------SGPGPVRRFPNRA--------ANR-TPYSAPKAPETTWQHDMFADPSSGFP

Query:  VQGGRASAIQTGTKLYISNLDYGVSNEDIKELFSEVGDMKRHGIHYDKSGRSKGTAEVVFSRRLDAVAAVKKYNNVQLDGKPMKIEIVGTNISTPAVNPT
           G  + ++TG KL +SNLD+GVS+ DI+ELF+E G +K+  +HYD+SGRS GTA+V F R+ DA+ A+K+YN V LDG+PM I++V + I T    P 
Subjt:  VQGGRASAIQTGTKLYISNLDYGVSNEDIKELFSEVGDMKRHGIHYDKSGRSKGTAEVVFSRRLDAVAAVKKYNNVQLDGKPMKIEIVGTNISTPAVNPT

Query:  AAVNPFENSNGAPRRQQGRGGL----PSRQRGRGFGRGRGRGRGPSEK--VSAEDLDADLEKYHA
         +VN      G   R +G GG      +R+  RG  RGRGRG G S K  +SAE+LDA L+ Y+A
Subjt:  AAVNPFENSNGAPRRQQGRGGL----PSRQRGRGFGRGRGRGRGPSEK--VSAEDLDADLEKYHA

Q6NQ72 THO complex subunit 4D4.2e-4242.66Show/hide
Query:  MAAPLDMSLDDIIKNNKKSRSGN---SRGRGR-----GSGPGPVRRFPNRAANRTPYS------APKAPETTWQHDMFADPSSGFPVQGGRASAIQTGTK
        M+  L+M+LD+I+K  K +RSG    SRGRGR     G G GP RR P  A N  P S        +     WQ  +F D      ++   AS ++ GT+
Subjt:  MAAPLDMSLDDIIKNNKKSRSGN---SRGRGR-----GSGPGPVRRFPNRAANRTPYS------APKAPETTWQHDMFADPSSGFPVQGGRASAIQTGTK

Query:  LYISNLDYGVSNEDIKELFSEVGDMKRHGIHYDKSGRSKGTAEVVFSRRLDAVAAVKKYNNVQLDGKPMKIEIVGTNISTPA-------VN---------
        L+++NLD GV+NEDI+ELFSE+G+++R+ IHYDK+GR  GTAEVV+ RR DA  A+KKYNNV LDG+PM++EI+G N S+ A       VN         
Subjt:  LYISNLDYGVSNEDIKELFSEVGDMKRHGIHYDKSGRSKGTAEVVFSRRLDAVAAVKKYNNVQLDGKPMKIEIVGTNISTPA-------VN---------

Query:  -----------------------PTAAVN---PFENSNGAPRRQQGRGGLPSRQRGRGFGRGRGRGRGPSEK---VSAEDLDADLEKYHAESM
                               P   V+   P  N  G   R  GRGG  +R RG G GRGRG GRG  +K    SA DLD DLE YHA++M
Subjt:  -----------------------PTAAVN---PFENSNGAPRRQQGRGGLPSRQRGRGFGRGRGRGRGPSEK---VSAEDLDADLEKYHAESM

Q8L719 THO complex subunit 4B4.8e-6254.83Show/hide
Query:  MAAPLDMSLDDIIKNNKKSRSGNSRG-----------RGRGSGPGPVRRFPNRAANRT-PYSAP----KAPETTWQHDMFADPSSGFPVQG-------GR
        M+  LDMSLDDIIK+N+K      RG            G GS  GP RRF NR   RT PYS P    +A +  WQ+D+FA  +S     G       G 
Subjt:  MAAPLDMSLDDIIKNNKKSRSGNSRG-----------RGRGSGPGPVRRFPNRAANRT-PYSAP----KAPETTWQHDMFADPSSGFPVQG-------GR

Query:  ASAIQTGTKLYISNLDYGVSNEDIKELFSEVGDMKRHGIHYDKSGRSKGTAEVVFSRRLDAVAAVKKYNNVQLDGKPMKIEIVGTNISTPAVNPTAAVN-
         S+I+TGTKLYISNLDYGVSNEDIKELFSEVGD+KR+GIHYD+SGRSKGTAEVVFSRR DA+AAVK+YNNVQLDGK MKIEIVGTN+S PA+   A    
Subjt:  ASAIQTGTKLYISNLDYGVSNEDIKELFSEVGDMKRHGIHYDKSGRSKGTAEVVFSRRLDAVAAVKKYNNVQLDGKPMKIEIVGTNISTPAVNPTAAVN-

Query:  PF----------ENSNG-------APRRQQGRGGLPSRQRGRGFG----------RGRG----RGRGPSEKVSAEDLDADLEKYHAESMQ
        PF          EN NG          R +GRGG   R RG GFG          RGRG     GRG  E VSAEDLDA+L+KYH E+M+
Subjt:  PF----------ENSNG-------APRRQQGRGGLPSRQRGRGFG----------RGRG----RGRGPSEKVSAEDLDADLEKYHAESMQ

Q8L773 THO complex subunit 4A1.8e-6962.95Show/hide
Query:  MAAPLDMSLDDIIKNNKKSR--SGNSRGRGRGSGPGPVRR-FPNRAANRT-PYSAPKAPETTWQHDMFADPSSGFPVQGGRASA-IQTGTKLYISNLDYG
        M+  LDMSLDD+I  N+KSR  +G +RG G GSGPGP RR  PNR + R+ PY + KAPE+TW HDMF+D S     + GR+SA I+TGTKLYISNLDYG
Subjt:  MAAPLDMSLDDIIKNNKKSR--SGNSRGRGRGSGPGPVRR-FPNRAANRT-PYSAPKAPETTWQHDMFADPSSGFPVQGGRASA-IQTGTKLYISNLDYG

Query:  VSNEDIKELFSEVGDMKRHGIHYDKSGRSKGTAEVVFSRRLDAVAAVKKYNNVQLDGKPMKIEIVGTNISTPAVNPTAAVNPFENSNGAP-RRQQGRGGL
        V NEDIKELF+EVG++KR+ +H+D+SGRSKGTAEVV+SRR DA+AAVKKYN+VQLDGKPMKIEIVGTN+ T A       N   NSNGAP R  QGRGG 
Subjt:  VSNEDIKELFSEVGDMKRHGIHYDKSGRSKGTAEVVFSRRLDAVAAVKKYNNVQLDGKPMKIEIVGTNISTPAVNPTAAVNPFENSNGAP-RRQQGRGGL

Query:  PSRQRG--------RGFGRGRGRGRGPSEKVSAEDLDADLEKYHAESMQIN
          +QRG         G GRGR  G+GP+EK+SAEDLDADL+KYH+  M+ N
Subjt:  PSRQRG--------RGFGRGRGRGRGPSEKVSAEDLDADLEKYHAESMQIN

Arabidopsis top hitse value%identityAlignment
AT5G02530.1 RNA-binding (RRM/RBD/RNP motifs) family protein3.4e-6354.83Show/hide
Query:  MAAPLDMSLDDIIKNNKKSRSGNSRG-----------RGRGSGPGPVRRFPNRAANRT-PYSAP----KAPETTWQHDMFADPSSGFPVQG-------GR
        M+  LDMSLDDIIK+N+K      RG            G GS  GP RRF NR   RT PYS P    +A +  WQ+D+FA  +S     G       G 
Subjt:  MAAPLDMSLDDIIKNNKKSRSGNSRG-----------RGRGSGPGPVRRFPNRAANRT-PYSAP----KAPETTWQHDMFADPSSGFPVQG-------GR

Query:  ASAIQTGTKLYISNLDYGVSNEDIKELFSEVGDMKRHGIHYDKSGRSKGTAEVVFSRRLDAVAAVKKYNNVQLDGKPMKIEIVGTNISTPAVNPTAAVN-
         S+I+TGTKLYISNLDYGVSNEDIKELFSEVGD+KR+GIHYD+SGRSKGTAEVVFSRR DA+AAVK+YNNVQLDGK MKIEIVGTN+S PA+   A    
Subjt:  ASAIQTGTKLYISNLDYGVSNEDIKELFSEVGDMKRHGIHYDKSGRSKGTAEVVFSRRLDAVAAVKKYNNVQLDGKPMKIEIVGTNISTPAVNPTAAVN-

Query:  PF----------ENSNG-------APRRQQGRGGLPSRQRGRGFG----------RGRG----RGRGPSEKVSAEDLDADLEKYHAESMQ
        PF          EN NG          R +GRGG   R RG GFG          RGRG     GRG  E VSAEDLDA+L+KYH E+M+
Subjt:  PF----------ENSNG-------APRRQQGRGGLPSRQRGRGFG----------RGRG----RGRGPSEKVSAEDLDADLEKYHAESMQ

AT5G02530.2 RNA-binding (RRM/RBD/RNP motifs) family protein9.9e-6354.86Show/hide
Query:  MAAPLDMSLDDIIKNNKKSRSGNSRG-----------RGRGSGPGPVRRFPNRAANRT-PYSAP----KAPETTWQHDMFADPSSGFPVQG-------GR
        M+  LDMSLDDIIK+N+K      RG            G GS  GP RRF NR   RT PYS P    +A +  WQ+D+FA  +S     G       G 
Subjt:  MAAPLDMSLDDIIKNNKKSRSGNSRG-----------RGRGSGPGPVRRFPNRAANRT-PYSAP----KAPETTWQHDMFADPSSGFPVQG-------GR

Query:  ASAIQTGTKLYISNLDYGVSNEDIKELFSEVGDMKRHGIHYDKSGRSKGTAEVVFSRRLDAVAAVKKYNNVQLDGKPMKIEIVGTNISTPAVNPTAAVN-
         S+I+TGTKLYISNLDYGVSNEDIKELFSEVGD+KR+GIHYD+SGRSKGTAEVVFSRR DA+AAVK+YNNVQLDGK MKIEIVGTN+S PA+   A    
Subjt:  ASAIQTGTKLYISNLDYGVSNEDIKELFSEVGDMKRHGIHYDKSGRSKGTAEVVFSRRLDAVAAVKKYNNVQLDGKPMKIEIVGTNISTPAVNPTAAVN-

Query:  PF----------ENSNGAPRRQ-----QGRGGLPSRQRGRGFG----------RGRG----RGRGPSEKVSAEDLDADLEKYHAESMQ
        PF          EN NG          +GRGG   R RG GFG          RGRG     GRG  E VSAEDLDA+L+KYH E+M+
Subjt:  PF----------ENSNGAPRRQ-----QGRGGLPSRQRGRGFG----------RGRG----RGRGPSEKVSAEDLDADLEKYHAESMQ

AT5G59950.1 RNA-binding (RRM/RBD/RNP motifs) family protein1.3e-7062.95Show/hide
Query:  MAAPLDMSLDDIIKNNKKSR--SGNSRGRGRGSGPGPVRR-FPNRAANRT-PYSAPKAPETTWQHDMFADPSSGFPVQGGRASA-IQTGTKLYISNLDYG
        M+  LDMSLDD+I  N+KSR  +G +RG G GSGPGP RR  PNR + R+ PY + KAPE+TW HDMF+D S     + GR+SA I+TGTKLYISNLDYG
Subjt:  MAAPLDMSLDDIIKNNKKSR--SGNSRGRGRGSGPGPVRR-FPNRAANRT-PYSAPKAPETTWQHDMFADPSSGFPVQGGRASA-IQTGTKLYISNLDYG

Query:  VSNEDIKELFSEVGDMKRHGIHYDKSGRSKGTAEVVFSRRLDAVAAVKKYNNVQLDGKPMKIEIVGTNISTPAVNPTAAVNPFENSNGAP-RRQQGRGGL
        V NEDIKELF+EVG++KR+ +H+D+SGRSKGTAEVV+SRR DA+AAVKKYN+VQLDGKPMKIEIVGTN+ T A       N   NSNGAP R  QGRGG 
Subjt:  VSNEDIKELFSEVGDMKRHGIHYDKSGRSKGTAEVVFSRRLDAVAAVKKYNNVQLDGKPMKIEIVGTNISTPAVNPTAAVNPFENSNGAP-RRQQGRGGL

Query:  PSRQRG--------RGFGRGRGRGRGPSEKVSAEDLDADLEKYHAESMQIN
          +QRG         G GRGR  G+GP+EK+SAEDLDADL+KYH+  M+ N
Subjt:  PSRQRG--------RGFGRGRGRGRGPSEKVSAEDLDADLEKYHAESMQIN

AT5G59950.3 RNA-binding (RRM/RBD/RNP motifs) family protein9.2e-6962.55Show/hide
Query:  MAAPLDMSLDDIIKNNKKSR--SGNSRGRGRGSGPGPVRR-FPNRAANRT-PYSAPKAPETTWQHDMFADPSSGFPVQGGRASA-IQTGTKLYISNLDYG
        M+  LDMSLDD+I  N+KSR  +G +RG G GSGPGP RR  PNR + R+ PY +  APE+TW HDMF+D S     + GR+SA I+TGTKLYISNLDYG
Subjt:  MAAPLDMSLDDIIKNNKKSR--SGNSRGRGRGSGPGPVRR-FPNRAANRT-PYSAPKAPETTWQHDMFADPSSGFPVQGGRASA-IQTGTKLYISNLDYG

Query:  VSNEDIKELFSEVGDMKRHGIHYDKSGRSKGTAEVVFSRRLDAVAAVKKYNNVQLDGKPMKIEIVGTNISTPAVNPTAAVNPFENSNGAP-RRQQGRGGL
        V NEDIKELF+EVG++KR+ +H+D+SGRSKGTAEVV+SRR DA+AAVKKYN+VQLDGKPMKIEIVGTN+ T A       N   NSNGAP R  QGRGG 
Subjt:  VSNEDIKELFSEVGDMKRHGIHYDKSGRSKGTAEVVFSRRLDAVAAVKKYNNVQLDGKPMKIEIVGTNISTPAVNPTAAVNPFENSNGAP-RRQQGRGGL

Query:  PSRQRG--------RGFGRGRGRGRGPSEKVSAEDLDADLEKYHAESMQIN
          +QRG         G GRGR  G+GP+EK+SAEDLDADL+KYH+  M+ N
Subjt:  PSRQRG--------RGFGRGRGRGRGPSEKVSAEDLDADLEKYHAESMQIN

AT5G59950.5 RNA-binding (RRM/RBD/RNP motifs) family protein1.7e-7062.7Show/hide
Query:  MAAPLDMSLDDIIKNNKKSR--SGNSRGRGRGSGPGPVRR-FPNRAANRT-PYSAPKAPETTWQHDMFADPSSGFPVQGGRASA-IQTGTKLYISNLDYG
        M+  LDMSLDD+I  N+KSR  +G +RG G GSGPGP RR  PNR + R+ PY + KAPE+TW HDMF+D S     + GR+SA I+TGTKLYISNLDYG
Subjt:  MAAPLDMSLDDIIKNNKKSR--SGNSRGRGRGSGPGPVRR-FPNRAANRT-PYSAPKAPETTWQHDMFADPSSGFPVQGGRASA-IQTGTKLYISNLDYG

Query:  VSNEDIKELFSEVGDMKRHGIHYDKSGRSKGTAEVVFSRRLDAVAAVKKYNNVQLDGKPMKIEIVGTNISTPAVNPTAAVNPFENSNGAP--RRQQGRGG
        V NEDIKELF+EVG++KR+ +H+D+SGRSKGTAEVV+SRR DA+AAVKKYN+VQLDGKPMKIEIVGTN+ T A       N   NSNGAP  R  QGRGG
Subjt:  VSNEDIKELFSEVGDMKRHGIHYDKSGRSKGTAEVVFSRRLDAVAAVKKYNNVQLDGKPMKIEIVGTNISTPAVNPTAAVNPFENSNGAP--RRQQGRGG

Query:  LPSRQRG--------RGFGRGRGRGRGPSEKVSAEDLDADLEKYHAESMQIN
           +QRG         G GRGR  G+GP+EK+SAEDLDADL+KYH+  M+ N
Subjt:  LPSRQRG--------RGFGRGRGRGRGPSEKVSAEDLDADLEKYHAESMQIN


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCGCTCCTTTGGATATGAGTCTTGACGATATCATAAAGAACAACAAGAAATCCAGATCCGGAAATTCTAGAGGTCGCGGAAGAGGTTCTGGACCTGGTCCCGTCCG
TCGATTCCCCAATCGCGCCGCTAACCGCACACCTTATTCCGCTCCCAAGGCCCCGGAGACAACGTGGCAACATGATATGTTCGCCGATCCGAGTTCTGGATTCCCTGTGC
AAGGTGGGCGAGCTTCTGCTATTCAAACTGGGACTAAGCTTTATATATCTAATTTGGATTACGGTGTTTCTAACGAAGATATTAAGGAACTTTTTTCTGAAGTCGGTGAT
ATGAAACGCCACGGAATCCATTATGACAAAAGTGGGAGATCCAAGGGAACAGCGGAAGTAGTTTTCTCACGACGACTAGATGCTGTTGCGGCTGTCAAGAAGTACAACAA
CGTTCAGCTTGATGGAAAACCAATGAAGATAGAGATCGTTGGAACTAATATTTCCACGCCTGCTGTTAATCCTACCGCTGCTGTGAACCCTTTCGAAAATTCAAATGGGG
CTCCGAGAAGGCAGCAAGGTAGGGGTGGTCTGCCATCACGTCAACGTGGTCGTGGTTTTGGAAGGGGGCGTGGGCGGGGAAGAGGCCCAAGTGAAAAGGTTTCTGCTGAA
GATCTTGATGCCGACTTGGAAAAGTATCATGCTGAGTCTATGCAGATAAATTAG
mRNA sequenceShow/hide mRNA sequence
GAAAATCAGCCTCCATCCCCAAATCTCTTTTCCCAAACCCTTTCACCATCGACGAATCTCCGAAACCCTAATTTCCCATTTTCTTCTGTCTTCCTTTTCGATTACTCCTT
CACTGTGTTTCCGTTCAATTTCTCTTCAACTATGGCCGCTCCTTTGGATATGAGTCTTGACGATATCATAAAGAACAACAAGAAATCCAGATCCGGAAATTCTAGAGGTC
GCGGAAGAGGTTCTGGACCTGGTCCCGTCCGTCGATTCCCCAATCGCGCCGCTAACCGCACACCTTATTCCGCTCCCAAGGCCCCGGAGACAACGTGGCAACATGATATG
TTCGCCGATCCGAGTTCTGGATTCCCTGTGCAAGGTGGGCGAGCTTCTGCTATTCAAACTGGGACTAAGCTTTATATATCTAATTTGGATTACGGTGTTTCTAACGAAGA
TATTAAGGAACTTTTTTCTGAAGTCGGTGATATGAAACGCCACGGAATCCATTATGACAAAAGTGGGAGATCCAAGGGAACAGCGGAAGTAGTTTTCTCACGACGACTAG
ATGCTGTTGCGGCTGTCAAGAAGTACAACAACGTTCAGCTTGATGGAAAACCAATGAAGATAGAGATCGTTGGAACTAATATTTCCACGCCTGCTGTTAATCCTACCGCT
GCTGTGAACCCTTTCGAAAATTCAAATGGGGCTCCGAGAAGGCAGCAAGGTAGGGGTGGTCTGCCATCACGTCAACGTGGTCGTGGTTTTGGAAGGGGGCGTGGGCGGGG
AAGAGGCCCAAGTGAAAAGGTTTCTGCTGAAGATCTTGATGCCGACTTGGAAAAGTATCATGCTGAGTCTATGCAGATAAATTAGTTGGTTCTTATATATGCTTTTGGTT
CGACGAGCACCATCTGTTCTCTGTATCACCACCATTGTCTAGACTTGGCAGAAAAGGGCTATAGTTTTTCCGTGAATTGGTTTGAATTTCTTTACAGCTTTCAGGCTTTC
TATTGTTAGCTTTCGTATGACTTCAGCACGGTAATGTAATTGACGAACAGTAGTCAGTGTGTACTTGCTTTCATTCATTAAGTCCTTTCTGTTTCATTTAATGAGTTGGG
AATCAAAGGATCTACTATTTCCCTTAGCCTGATCACATCTACGAGGGTGACATTGGTTGGAATAAAACGCTGGCTGCTAATTATACAACAAATGAGTTGCGGTTCCCCAT
TGAGGGAACCTCAACTCAATAAATCTAATATGTGTAGGCATTGAACCGAGAGTTGGCTAACGTGCTAAAAGATGAACAGTCTTCATAGCTATGGGATCCGACTCGAGTCA
AATGAAATTAAGAAATTTCCAAGATGAATAAGCCTTTGTTGGTGTTTGGAATCTTTGCCTGCGTTTTATAGTAAAAATGCCTGATAACAGGTGAGATATCATTATTTTAA
AGTAATTGTCGTTCAAATGTGTGCAACGTGGTGGTGGTATTCTACTGCTGTGCTTGTGGAGAAAATCCGCAGAGCAATTTGCCGCAACTCAGAGGCCTGCATATGAGGTA
CCATACCATCACTGTTGAGGGACAGTATCAAGTTTTTATACTGCTCGAGTGCTAGTCTTGCAACATGATCTCCTTCCTTAGACGATGGATAGCATCATGGCATTTTGACC
CTGATCAACGAGCGGTAAAAACTTGGTCTCTTCGGAATCATATGCAATGCATTTACATTTGTTTGAATATTTGAAAACAACCTGCCTGTGGATTGTGTTTGTAGACGAAT
ATGTGTAGGGGTAAGGAGTAATGCCATTGGATTTTCATATGATTCTTTTCATGACATATAGGTATCAATAGCGTAAATAGGTATGTTGATATCAGCTTCTTCATATTTCC
ATACTCCCCCCGATTAAACTTGAGCCAGTTTTGATGGTTTATTTGTACAAAGCTATAATGTGATATTGACATAATGTGTATGTCGATATCGATTTACGAAGTGTGGTTTA
TATGGATAATAGGGGGATGTATAGTGTTCTAATTTATAGAAATATTGCGTAGCTGGTCTGAATAGCACAAATTAATATGTATTCTAATAGTATATTGCGATGTTCAATGT
GAAATAGAATATCAGACTGGAAGTCTTTTGATTCCATAGTTGAATGTGGATGTATATATGTGATTGCACAATGGAATCAGATTGTGTCACGGCTTTGAAGACAGCTACTC
TCCACTTGGAAGCCTTATTTATTTTTTTATCTTTCTAAAAAAGAACAATACCAAACAATCAAACGTTGTTCTTTACACTAAGTCCTCATTTAGGCCTTTGTGTGAAGTTT
AGGGTACTTGGAATCTTTTAAATCGGTCTATATCCTATTTTGGCTTGAATCTTGAATCTTATTGTATTTTGGTCCACACTTAAGGTATTGTAGTCTAATCTTTTAAAAGT
GTTTAGTTTGATCTTTGCTATTAAATATTTTAGTGAAAAATACCTTTTTGGTGTCTTAGCTTTTCTGGGATAGGTGCGTTTGGTTAAGGGTTTCTGAAATGGTCATTTTG
GTCTCGAAGGTGTAAGAATAGGTTTAATAAGAATAGGTTTAATAGGACCTCAAACTGTTAAAAACAAACAGGAAATTGACACCTTGAATTGAAAATAAAAAGGTTTTAAA
CATAGATTCTTTCTTCTGTTTCTACATGATTCTATTCTCTTTTTTTTTTCTCATTCGCCTCTATCAAGTGTCATTTACCTCTATGTAGCATTCTCCCCATTCTAAAACAT
CCATCATTGGGTCTCCTCTCTCCAGATGTTTCTTTCTCAATTTTCTCAAGTATTTCGTGAAAGACTCCATTGATTAGGCAACTTTTTACAAGAAATGCAATCTCTTCCCT
TTTACTAACTGCTTTGGTTTTCTTATGTGATTTTATACAAAGAAACTCAATTTATTTTTGTCGGGATTGTCAAAATTTTTAATTTTCAAATGGTTTTCATGATGTTAAAT
TTACGGAGGAAGAATGTAGGAAGAAAATCTTGATACGAGATCCCAATCTCCGAAATCTTCATCCGTAACTCACGTTGCTGCCTATCTGACTCCATATGGATTGAGGGACT
TATCCCGTTTCATGAAATTGAATCCAAATTTAGGGCCGACTTGCTCCATCAAGTTGGATATGTGAGATGAAACTAGGGAATCCAATTCCAAGACTCCGTCAAATCCTAAT
CCTAATTCAGACTCAATTCTGAGTGCAATTTACAAAATCCCCAAGCGAAGTAGTCGGTTCCTTGTAGTAGTAATTCTCGTATTTGATGAAGCATCTGTCGAGGAAGATCC
AGTGACGGTGGTAAATTTACAGAGACCCGTTTCTTGAAATTAAACCCAAACACAAACACTTTTTAGATG
Protein sequenceShow/hide protein sequence
MAAPLDMSLDDIIKNNKKSRSGNSRGRGRGSGPGPVRRFPNRAANRTPYSAPKAPETTWQHDMFADPSSGFPVQGGRASAIQTGTKLYISNLDYGVSNEDIKELFSEVGD
MKRHGIHYDKSGRSKGTAEVVFSRRLDAVAAVKKYNNVQLDGKPMKIEIVGTNISTPAVNPTAAVNPFENSNGAPRRQQGRGGLPSRQRGRGFGRGRGRGRGPSEKVSAE
DLDADLEKYHAESMQIN