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PI0000007 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0000007
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionTransposon Ty3-I Gag-Pol polyprotein
Genome locationchr05:16239588..16240354
RNA-Seq ExpressionPI0000007
SyntenyPI0000007
Gene Ontology termsGO:0015074 - DNA integration (biological process)
GO:0003676 - nucleic acid binding (molecular function)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0025749.1 Transposon Ty3-I Gag-Pol polyprotein [Cucumis melo var. makuwa]1.5e-1084.09Show/hide
Query:  MNKDCVNKKVMVIRNEIIDSKDECDQHNAQLEGESDAHNDEYIE
        M+KDCVNKKVMVIRN IIDSKDECD+H+A LE ESDAH+DEYIE
Subjt:  MNKDCVNKKVMVIRNEIIDSKDECDQHNAQLEGESDAHNDEYIE

KGN53753.1 hypothetical protein Csa_014547 [Cucumis sativus]4.9e-0980Show/hide
Query:  MNKDCVNKKVMVIRNEIIDSKDECDQHNAQLEGESDAHNDEYIEE
        M+KD VNKKVMVIRN IIDSK+ECD+H+A LE ESDAH+DEYIEE
Subjt:  MNKDCVNKKVMVIRNEIIDSKDECDQHNAQLEGESDAHNDEYIEE

TYK06180.1 Transposon Ty3-I Gag-Pol polyprotein [Cucumis melo var. makuwa]2.2e-0981.82Show/hide
Query:  MNKDCVNKKVMVIRNEIIDSKDECDQHNAQLEGESDAHNDEYIE
        M+KDCVNKKVMVIRN IIDSKDE D+H+A LE ESDAH+DEYIE
Subjt:  MNKDCVNKKVMVIRNEIIDSKDECDQHNAQLEGESDAHNDEYIE

XP_038896445.1 LOW QUALITY PROTEIN: uncharacterized protein LOC120084703 [Benincasa hispida]5.4e-0873.33Show/hide
Query:  MNKDCVNKKVMVIRNEIIDSKDECDQHNAQLEGESDAHNDEYIEE
        M+KDCVNKKV+VIRNEIIDS+DECD+    LE ES+A +DEYIEE
Subjt:  MNKDCVNKKVMVIRNEIIDSKDECDQHNAQLEGESDAHNDEYIEE

XP_038902374.1 LOW QUALITY PROTEIN: uncharacterized protein LOC120089011 [Benincasa hispida]3.0e-0666.67Show/hide
Query:  MNKDCVNKKVMVIRNEIIDSKDECDQHNAQLEGESDAHNDEYIEE
        ++KDCVNKKVMVIRN IIDS++ECD+  + LE ES+A +DEYI+E
Subjt:  MNKDCVNKKVMVIRNEIIDSKDECDQHNAQLEGESDAHNDEYIEE

TrEMBL top hitse value%identityAlignment
A0A0A0KW07 Uncharacterized protein2.4e-0980Show/hide
Query:  MNKDCVNKKVMVIRNEIIDSKDECDQHNAQLEGESDAHNDEYIEE
        M+KD VNKKVMVIRN IIDSK+ECD+H+A LE ESDAH+DEYIEE
Subjt:  MNKDCVNKKVMVIRNEIIDSKDECDQHNAQLEGESDAHNDEYIEE

A0A5A7SKE7 Transposon Ty3-I Gag-Pol polyprotein7.4e-1184.09Show/hide
Query:  MNKDCVNKKVMVIRNEIIDSKDECDQHNAQLEGESDAHNDEYIE
        M+KDCVNKKVMVIRN IIDSKDECD+H+A LE ESDAH+DEYIE
Subjt:  MNKDCVNKKVMVIRNEIIDSKDECDQHNAQLEGESDAHNDEYIE

A0A5A7SRG3 Transposon Ty3-I Gag-Pol polyprotein7.2e-0663.04Show/hide
Query:  MNKDCVNKKVMVIRNEIIDSKDECDQHNAQLEGESDAH-NDEYIEE
        M+KDC+NK+VMV+RN +IDSKDEC++++AQLE E +   +DEYIEE
Subjt:  MNKDCVNKKVMVIRNEIIDSKDECDQHNAQLEGESDAH-NDEYIEE

A0A5A7VK67 Transposon Ty3-I Gag-Pol polyprotein2.1e-0560.87Show/hide
Query:  MNKDCVNKKVMVIRNEIIDSKDECDQHNAQLEGESDAH-NDEYIEE
        M+KDC+NK+VMV+RN +IDS+DEC++++AQLE E +   +DEYIEE
Subjt:  MNKDCVNKKVMVIRNEIIDSKDECDQHNAQLEGESDAH-NDEYIEE

A0A5D3C4C3 Transposon Ty3-I Gag-Pol polyprotein1.1e-0981.82Show/hide
Query:  MNKDCVNKKVMVIRNEIIDSKDECDQHNAQLEGESDAHNDEYIE
        M+KDCVNKKVMVIRN IIDSKDE D+H+A LE ESDAH+DEYIE
Subjt:  MNKDCVNKKVMVIRNEIIDSKDECDQHNAQLEGESDAHNDEYIE

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAACAAAGATTGTGTCAATAAAAAGGTCATGGTGATAAGAAATGAGATAATTGATTCGAAAGACGAATGTGATCAACATAATGCACAACTTGAGGGAGAATCTGATGC
ACATAATGATGAATACATTGAAGAAGAAAGAATGTCAGCTTGGTTATAA
mRNA sequenceShow/hide mRNA sequence
ATGAACAAAGATTGTGTCAATAAAAAGGTCATGGTGATAAGAAATGAGATAATTGATTCGAAAGACGAATGTGATCAACATAATGCACAACTTGAGGGAGAATCTGATGC
ACATAATGATGAATACATTGAAGAAGAAAGAATGTCAGCTTGGTTATAA
Protein sequenceShow/hide protein sequence
MNKDCVNKKVMVIRNEIIDSKDECDQHNAQLEGESDAHNDEYIEEERMSAWL