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PI0000025 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0000025
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionReverse transcriptase
Genome locationchr04:27604136..27605067
RNA-Seq ExpressionPI0000025
SyntenyPI0000025
Gene Ontology termsGO:0006807 - nitrogen compound metabolic process (biological process)
GO:0043170 - macromolecule metabolic process (biological process)
GO:0044238 - primary metabolic process (biological process)
GO:0003824 - catalytic activity (molecular function)
GO:0005488 - binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0035974.1 hypothetical protein E6C27_scaffold56G001830 [Cucumis melo var. makuwa]3.6e-1947.76Show/hide
Query:  VDQDSREMLQGDAMPRRE------KNYREERQDEFLNLTEEDLTVVEYEKKFTSLAKYAISIVYLEKDRCRRFERGLRPEIRTPVTTYVAWCKFVELIEA
        +D++ RE+LQG AM  RE      K YR+E++DEFL+L + +L+VVEY+KKFT LAKYA++++  E  RCRRF  GLR +IRTPV   V    + +L++A
Subjt:  VDQDSREMLQGDAMPRRE------KNYREERQDEFLNLTEEDLTVVEYEKKFTSLAKYAISIVYLEKDRCRRFERGLRPEIRTPVTTYVAWCKFVELIEA

Query:  ALRMEKSLTKGKEMAMSTRSKEEEINSVKERSFK
         LR+EKS+  G + A S  S EEE  S++ +  K
Subjt:  ALRMEKSLTKGKEMAMSTRSKEEEINSVKERSFK

KAA0051348.1 reverse transcriptase [Cucumis melo var. makuwa]4.4e-1753.76Show/hide
Query:  YREERQDEFLNLTEEDLTVVEYEKKFTSLAKYAISIVYLEKDRCRRFERGLRPEIRTPVTTYVAWCKFVELIEAALRMEKSLTKGKEMAMSTR
        Y E ++DEFL L +  L+V EYE+K+T L++YA  IV  E DRCRRFERGLR EIRTPVT    W  F +L+E ALR+E+S+T+ K +   +R
Subjt:  YREERQDEFLNLTEEDLTVVEYEKKFTSLAKYAISIVYLEKDRCRRFERGLRPEIRTPVTTYVAWCKFVELIEAALRMEKSLTKGKEMAMSTR

KAA0059911.1 reverse transcriptase [Cucumis melo var. makuwa]5.7e-1747.79Show/hide
Query:  YREERQDEFLNLTEEDLTVVEYEKKFTSLAKYAISIVYLEKDRCRRFERGLRPEIRTPVTTYVAWCKFVELIEAALRMEKSLTKGKEMAMSTR--SKEEE
        Y E ++DEFL L +  L+V EYE+K+T L++YA  IV  E DRCRRFERGLR EIRTPVT    W  F +L+E ALR+E+S+T+ K     +R  S    
Subjt:  YREERQDEFLNLTEEDLTVVEYEKKFTSLAKYAISIVYLEKDRCRRFERGLRPEIRTPVTTYVAWCKFVELIEAALRMEKSLTKGKEMAMSTR--SKEEE

Query:  INSVKERSFKRGV
        +   ++R F  G+
Subjt:  INSVKERSFKRGV

KAA0067839.1 Gag protease polyprotein-like protein [Cucumis melo var. makuwa]2.0e-1756.04Show/hide
Query:  RREKNYREERQDEFLNLTEEDLTVVEYEKKFTSLAKYAISIVYLEKDRCRRFERGLRPEIRTPVTTYVAWCKFVELIEAALRMEKSLTKGK
        R +  Y E ++DEFL L +  L+V EYE+K+T L++YA  IV  E DRCRRFERGLR EIRTPVTT   W  F +L+E ALR+E+S+T+ K
Subjt:  RREKNYREERQDEFLNLTEEDLTVVEYEKKFTSLAKYAISIVYLEKDRCRRFERGLRPEIRTPVTTYVAWCKFVELIEAALRMEKSLTKGK

TYK15340.1 uncharacterized protein E5676_scaffold16974G00010 [Cucumis melo var. makuwa]1.2e-1754.84Show/hide
Query:  YREERQDEFLNLTEEDLTVVEYEKKFTSLAKYAISIVYLEKDRCRRFERGLRPEIRTPVTTYVAWCKFVELIEAALRMEKSLTKGKEMAMSTR
        Y E ++DEFL L +  L+V EYE+K+T L++YA  IV  E DRCRRFERGLR EIRTPVTT   W  F +L+E ALR+E+S+T+ K +   +R
Subjt:  YREERQDEFLNLTEEDLTVVEYEKKFTSLAKYAISIVYLEKDRCRRFERGLRPEIRTPVTTYVAWCKFVELIEAALRMEKSLTKGKEMAMSTR

TrEMBL top hitse value%identityAlignment
A0A5A7U7T7 Reverse transcriptase2.1e-1753.76Show/hide
Query:  YREERQDEFLNLTEEDLTVVEYEKKFTSLAKYAISIVYLEKDRCRRFERGLRPEIRTPVTTYVAWCKFVELIEAALRMEKSLTKGKEMAMSTR
        Y E ++DEFL L +  L+V EYE+K+T L++YA  IV  E DRCRRFERGLR EIRTPVT    W  F +L+E ALR+E+S+T+ K +   +R
Subjt:  YREERQDEFLNLTEEDLTVVEYEKKFTSLAKYAISIVYLEKDRCRRFERGLRPEIRTPVTTYVAWCKFVELIEAALRMEKSLTKGKEMAMSTR

A0A5A7V2E0 Reverse transcriptase2.8e-1747.79Show/hide
Query:  YREERQDEFLNLTEEDLTVVEYEKKFTSLAKYAISIVYLEKDRCRRFERGLRPEIRTPVTTYVAWCKFVELIEAALRMEKSLTKGKEMAMSTR--SKEEE
        Y E ++DEFL L +  L+V EYE+K+T L++YA  IV  E DRCRRFERGLR EIRTPVT    W  F +L+E ALR+E+S+T+ K     +R  S    
Subjt:  YREERQDEFLNLTEEDLTVVEYEKKFTSLAKYAISIVYLEKDRCRRFERGLRPEIRTPVTTYVAWCKFVELIEAALRMEKSLTKGKEMAMSTR--SKEEE

Query:  INSVKERSFKRGV
        +   ++R F  G+
Subjt:  INSVKERSFKRGV

A0A5A7VRQ5 Gag protease polyprotein-like protein9.6e-1856.04Show/hide
Query:  RREKNYREERQDEFLNLTEEDLTVVEYEKKFTSLAKYAISIVYLEKDRCRRFERGLRPEIRTPVTTYVAWCKFVELIEAALRMEKSLTKGK
        R +  Y E ++DEFL L +  L+V EYE+K+T L++YA  IV  E DRCRRFERGLR EIRTPVTT   W  F +L+E ALR+E+S+T+ K
Subjt:  RREKNYREERQDEFLNLTEEDLTVVEYEKKFTSLAKYAISIVYLEKDRCRRFERGLRPEIRTPVTTYVAWCKFVELIEAALRMEKSLTKGK

A0A5D3CVE9 CCHC-type domain-containing protein5.6e-1854.84Show/hide
Query:  YREERQDEFLNLTEEDLTVVEYEKKFTSLAKYAISIVYLEKDRCRRFERGLRPEIRTPVTTYVAWCKFVELIEAALRMEKSLTKGKEMAMSTR
        Y E ++DEFL L +  L+V EYE+K+T L++YA  IV  E DRCRRFERGLR EIRTPVTT   W  F +L+E ALR+E+S+T+ K +   +R
Subjt:  YREERQDEFLNLTEEDLTVVEYEKKFTSLAKYAISIVYLEKDRCRRFERGLRPEIRTPVTTYVAWCKFVELIEAALRMEKSLTKGKEMAMSTR

A0A5D3E3Q3 Retrotrans_gag domain-containing protein1.7e-1947.76Show/hide
Query:  VDQDSREMLQGDAMPRRE------KNYREERQDEFLNLTEEDLTVVEYEKKFTSLAKYAISIVYLEKDRCRRFERGLRPEIRTPVTTYVAWCKFVELIEA
        +D++ RE+LQG AM  RE      K YR+E++DEFL+L + +L+VVEY+KKFT LAKYA++++  E  RCRRF  GLR +IRTPV   V    + +L++A
Subjt:  VDQDSREMLQGDAMPRRE------KNYREERQDEFLNLTEEDLTVVEYEKKFTSLAKYAISIVYLEKDRCRRFERGLRPEIRTPVTTYVAWCKFVELIEA

Query:  ALRMEKSLTKGKEMAMSTRSKEEEINSVKERSFK
         LR+EKS+  G + A S  S EEE  S++ +  K
Subjt:  ALRMEKSLTKGKEMAMSTRSKEEEINSVKERSFK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGTCTGGAGGATAGTAGGTTAGTTCTAGTGGTGGTCCGAGTTCGAATTCATGTGGAGATTACGAATAAACGGAGCCATGAAGGCGAGGAAGTGGATCAGGACAGTAG
AGAAATGCTTCAGGGTGATGCAATGCCCAGAAGAGAGAAGAATTACAGAGAGGAGAGGCAAGATGAATTCTTGAATTTGACAGAAGAGGACTTGACAGTAGTAGAGTATG
AGAAGAAGTTTACAAGTTTAGCAAAGTATGCGATATCAATAGTGTATTTGGAGAAAGATAGATGTAGGCGTTTTGAAAGAGGTTTAAGACCTGAGATTAGAACGCCGGTG
ACAACTTATGTCGCTTGGTGCAAATTTGTTGAACTTATTGAGGCGGCGTTACGCATGGAGAAAAGTTTGACTAAAGGAAAAGAAATGGCAATGTCTACGCGTAGTAAAGA
AGAAGAAATAAATAGTGTAAAAGAAAGAAGTTTTAAGCGAGGTGTGGAAAAATGGGTCCTTATCAGAACAAGTGCAAGGAGAAGACTGGGTTAG
mRNA sequenceShow/hide mRNA sequence
ATGAGTCTGGAGGATAGTAGGTTAGTTCTAGTGGTGGTCCGAGTTCGAATTCATGTGGAGATTACGAATAAACGGAGCCATGAAGGCGAGGAAGTGGATCAGGACAGTAG
AGAAATGCTTCAGGGTGATGCAATGCCCAGAAGAGAGAAGAATTACAGAGAGGAGAGGCAAGATGAATTCTTGAATTTGACAGAAGAGGACTTGACAGTAGTAGAGTATG
AGAAGAAGTTTACAAGTTTAGCAAAGTATGCGATATCAATAGTGTATTTGGAGAAAGATAGATGTAGGCGTTTTGAAAGAGGTTTAAGACCTGAGATTAGAACGCCGGTG
ACAACTTATGTCGCTTGGTGCAAATTTGTTGAACTTATTGAGGCGGCGTTACGCATGGAGAAAAGTTTGACTAAAGGAAAAGAAATGGCAATGTCTACGCGTAGTAAAGA
AGAAGAAATAAATAGTGTAAAAGAAAGAAGTTTTAAGCGAGGTGTGGAAAAATGGGTCCTTATCAGAACAAGTGCAAGGAGAAGACTGGGTTAG
Protein sequenceShow/hide protein sequence
MSLEDSRLVLVVVRVRIHVEITNKRSHEGEEVDQDSREMLQGDAMPRREKNYREERQDEFLNLTEEDLTVVEYEKKFTSLAKYAISIVYLEKDRCRRFERGLRPEIRTPV
TTYVAWCKFVELIEAALRMEKSLTKGKEMAMSTRSKEEEINSVKERSFKRGVEKWVLIRTSARRRLG