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PI0000056 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0000056
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionRetrotransposon protein
Genome locationchr08:11148095..11148380
RNA-Seq ExpressionPI0000056
SyntenyPI0000056
Gene Ontology termsGO:0046872 - metal ion binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0050106.1 retrotransposon protein [Cucumis melo var. makuwa]9.9e-2468.09Show/hide
Query:  MASKNSKATKHRWTTIEDETLVECLLQLVEEGGWRADNGTFKPGYLVQ---------------------ARVKILKKQYTAIVEMMEPACTGFG
        MAS NSKATKHRWTTI DE LVECLLQLVEEGGWRADNGTFK GYLVQ                     +RVKILKKQY AI EMM PAC+GFG
Subjt:  MASKNSKATKHRWTTIEDETLVECLLQLVEEGGWRADNGTFKPGYLVQ---------------------ARVKILKKQYTAIVEMMEPACTGFG

KGN61713.1 hypothetical protein Csa_006361 [Cucumis sativus]1.4e-2585.51Show/hide
Query:  NSKATKHRWTTIEDETLVECLLQLVEEGGWRADNGTFKPGYLVQARVKILKKQYTAIVEMMEPACTGFG
        NSKA +HRWTTIE+E LVECLLQLVEEGGWRADNGTFK GYLVQ RVKILKKQYTAIVEMM P  +GFG
Subjt:  NSKATKHRWTTIEDETLVECLLQLVEEGGWRADNGTFKPGYLVQARVKILKKQYTAIVEMMEPACTGFG

TYK06362.1 retrotransposon protein [Cucumis melo var. makuwa]9.9e-2479.45Show/hide
Query:  MASKNSKATKHRWTTIEDETLVECLLQLVEEGGWRADNGTFKPGYLVQARVKILKKQYTAIVEMMEPACTGFG
        MAS NSKATKHRWTTIEDE LV CLLQLVEEGGWRADNGTFKPGYL         KQYTAI EMM PAC+GFG
Subjt:  MASKNSKATKHRWTTIEDETLVECLLQLVEEGGWRADNGTFKPGYLVQARVKILKKQYTAIVEMMEPACTGFG

TYK07921.1 hypothetical protein E5676_scaffold265G00330 [Cucumis melo var. makuwa]2.2e-2379.45Show/hide
Query:  MASKNSKATKHRWTTIEDETLVECLLQLVEEGGWRADNGTFKPGYLVQARVKILKKQYTAIVEMMEPACTGFG
        MAS NSKATKHRWTTIEDE LVECLLQLVEEGGWRADNGTFK GYL         KQYTAI EMM PAC+GFG
Subjt:  MASKNSKATKHRWTTIEDETLVECLLQLVEEGGWRADNGTFKPGYLVQARVKILKKQYTAIVEMMEPACTGFG

XP_008462939.1 PREDICTED: uncharacterized protein At2g29880-like [Cucumis melo]2.9e-2379.45Show/hide
Query:  MASKNSKATKHRWTTIEDETLVECLLQLVEEGGWRADNGTFKPGYLVQARVKILKKQYTAIVEMMEPACTGFG
        MAS  SKATKHRWTTIEDETLVECLLQLVEEGGWRADNGTFKPGYL         KQYTAI EMM  AC+GFG
Subjt:  MASKNSKATKHRWTTIEDETLVECLLQLVEEGGWRADNGTFKPGYLVQARVKILKKQYTAIVEMMEPACTGFG

TrEMBL top hitse value%identityAlignment
A0A0A0LIS4 Uncharacterized protein6.7e-2685.51Show/hide
Query:  NSKATKHRWTTIEDETLVECLLQLVEEGGWRADNGTFKPGYLVQARVKILKKQYTAIVEMMEPACTGFG
        NSKA +HRWTTIE+E LVECLLQLVEEGGWRADNGTFK GYLVQ RVKILKKQYTAIVEMM P  +GFG
Subjt:  NSKATKHRWTTIEDETLVECLLQLVEEGGWRADNGTFKPGYLVQARVKILKKQYTAIVEMMEPACTGFG

A0A1S3CI24 uncharacterized protein At2g29880-like1.4e-2379.45Show/hide
Query:  MASKNSKATKHRWTTIEDETLVECLLQLVEEGGWRADNGTFKPGYLVQARVKILKKQYTAIVEMMEPACTGFG
        MAS  SKATKHRWTTIEDETLVECLLQLVEEGGWRADNGTFKPGYL         KQYTAI EMM  AC+GFG
Subjt:  MASKNSKATKHRWTTIEDETLVECLLQLVEEGGWRADNGTFKPGYLVQARVKILKKQYTAIVEMMEPACTGFG

A0A5A7U7F7 Retrotransposon protein4.8e-2468.09Show/hide
Query:  MASKNSKATKHRWTTIEDETLVECLLQLVEEGGWRADNGTFKPGYLVQ---------------------ARVKILKKQYTAIVEMMEPACTGFG
        MAS NSKATKHRWTTI DE LVECLLQLVEEGGWRADNGTFK GYLVQ                     +RVKILKKQY AI EMM PAC+GFG
Subjt:  MASKNSKATKHRWTTIEDETLVECLLQLVEEGGWRADNGTFKPGYLVQ---------------------ARVKILKKQYTAIVEMMEPACTGFG

A0A5D3C542 Retrotransposon protein4.8e-2479.45Show/hide
Query:  MASKNSKATKHRWTTIEDETLVECLLQLVEEGGWRADNGTFKPGYLVQARVKILKKQYTAIVEMMEPACTGFG
        MAS NSKATKHRWTTIEDE LV CLLQLVEEGGWRADNGTFKPGYL         KQYTAI EMM PAC+GFG
Subjt:  MASKNSKATKHRWTTIEDETLVECLLQLVEEGGWRADNGTFKPGYLVQARVKILKKQYTAIVEMMEPACTGFG

A0A5D3C7T4 Uncharacterized protein1.1e-2379.45Show/hide
Query:  MASKNSKATKHRWTTIEDETLVECLLQLVEEGGWRADNGTFKPGYLVQARVKILKKQYTAIVEMMEPACTGFG
        MAS NSKATKHRWTTIEDE LVECLLQLVEEGGWRADNGTFK GYL         KQYTAI EMM PAC+GFG
Subjt:  MASKNSKATKHRWTTIEDETLVECLLQLVEEGGWRADNGTFKPGYLVQARVKILKKQYTAIVEMMEPACTGFG

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCATCGAAAAATTCAAAAGCCACTAAGCATCGGTGGACAACCATTGAGGATGAGACATTAGTTGAGTGCTTACTACAATTAGTAGAGGAAGGTGGCTGGAGGGCTGA
TAATGGGACATTCAAACCTGGATATTTGGTACAAGCGAGAGTGAAAATTTTGAAGAAGCAGTACACTGCCATAGTAGAGATGATGGAGCCAGCGTGTACTGGGTTTGGTT
AG
mRNA sequenceShow/hide mRNA sequence
ATGGCATCGAAAAATTCAAAAGCCACTAAGCATCGGTGGACAACCATTGAGGATGAGACATTAGTTGAGTGCTTACTACAATTAGTAGAGGAAGGTGGCTGGAGGGCTGA
TAATGGGACATTCAAACCTGGATATTTGGTACAAGCGAGAGTGAAAATTTTGAAGAAGCAGTACACTGCCATAGTAGAGATGATGGAGCCAGCGTGTACTGGGTTTGGTT
AG
Protein sequenceShow/hide protein sequence
MASKNSKATKHRWTTIEDETLVECLLQLVEEGGWRADNGTFKPGYLVQARVKILKKQYTAIVEMMEPACTGFG