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PI0000069 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0000069
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionGlial fibrillary acidic protein-like
Genome locationchr10:8749209..8749825
RNA-Seq ExpressionPI0000069
SyntenyPI0000069
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0025321.1 glial fibrillary acidic protein-like [Cucumis melo var. makuwa]3.6e-5359.11Show/hide
Query:  IQVRKKNKRLLRNIVDLHEETKAKKV-------------------------------------EVLQQSVKKYKYQVMEAERKNKFLQEAINSFEGQLLI
        IQVRKKNKRLLRNI +LHEE +A+KV                                     EVLQ S+++YK Q++EAE KN FLQ+A+NS E QLLI
Subjt:  IQVRKKNKRLLRNIVDLHEETKAKKV-------------------------------------EVLQQSVKKYKYQVMEAERKNKFLQEAINSFEGQLLI

Query:  CRKAREVATDDYIKLKEKYQEMSIDFMIWRDEYGILGRKYDGARGQIEQGAKKLTQMARMADQFSVQAMTLRQGIVPTQDSNRELSHFLWIIGQYLGRFG
        CRKAREV TDDY +L EKYQEMSIDFM+W+DEY  L RKYD A  ++E+GA+KL QMA +ADQFSVQA TLRQG++PT+D + ELSHFL IIGQ LGRFG
Subjt:  CRKAREVATDDYIKLKEKYQEMSIDFMIWRDEYGILGRKYDGARGQIEQGAKKLTQMARMADQFSVQAMTLRQGIVPTQDSNRELSHFLWIIGQYLGRFG

Query:  CYH
        CYH
Subjt:  CYH

KAA0034829.1 glial fibrillary acidic protein-like [Cucumis melo var. makuwa]1.2e-5369.33Show/hide
Query:  IQVRKKNKRLLRNIVDLHEETKAK----KVEVLQQSVKKYKYQVMEAERKNKFLQEAINSFEGQLLICRKAREVATDDYIKLKEKYQEMSIDFMIWRDEY
        IQVRKKNK LLRNI +LHEE +AK    ++EVLQ S+K+YK Q+++ E KN+FLQ+A+NS E QLLICRKA+EV TDDY +L EKYQEMSIDFM+W+DEY
Subjt:  IQVRKKNKRLLRNIVDLHEETKAK----KVEVLQQSVKKYKYQVMEAERKNKFLQEAINSFEGQLLICRKAREVATDDYIKLKEKYQEMSIDFMIWRDEY

Query:  GILGRKYDGARGQIEQGAKKLTQMARMADQFSVQAMTLRQGIVPTQDSNRELSHFLWIIGQYL
          L RKYD A G++E+GA+KL QMA MADQFS+QA TLRQG++PT+D+NRELSHFL IIGQYL
Subjt:  GILGRKYDGARGQIEQGAKKLTQMARMADQFSVQAMTLRQGIVPTQDSNRELSHFLWIIGQYL

KAA0046606.1 glial fibrillary acidic protein-like [Cucumis melo var. makuwa]6.4e-5870.59Show/hide
Query:  IQVRKKNKRLLRNIVDLHEETKAKK----VEVLQQSVKKYKYQVMEAERKNKFLQEAINSFEGQLLICRKAREVATDDYIKLKEKYQEMSIDFMIWRDEY
        IQVRKKNKRLLRNI +LHEE +AKK    +EVLQ S+++YK Q++EAE KN FLQ+A+NS E QLLICRKAR+V TDDY +L EKYQEMSIDFM+W+DEY
Subjt:  IQVRKKNKRLLRNIVDLHEETKAKK----VEVLQQSVKKYKYQVMEAERKNKFLQEAINSFEGQLLICRKAREVATDDYIKLKEKYQEMSIDFMIWRDEY

Query:  GILGRKYDGARGQIEQGAKKLTQMARMADQFSVQAMTLRQGIVPTQDSNRELSHFLWIIGQYLGRFGCYH
          L RKYD A G++E+GA+KL QMAR+ADQFSVQA TLRQG++PT+D+++ELSHFL IIGQ LGRF CYH
Subjt:  GILGRKYDGARGQIEQGAKKLTQMARMADQFSVQAMTLRQGIVPTQDSNRELSHFLWIIGQYLGRFGCYH

KAA0051514.1 glial fibrillary acidic protein-like [Cucumis melo var. makuwa]5.6e-5472.05Show/hide
Query:  IQVRKKNKRLLRNIVDLHEETKAK----KVEVLQQSVKKYKYQVMEAERKNKFLQEAINSFEGQLLICRKAREVATDDYIKLKEKYQEMSIDFMIWRDEY
        IQ+RKKNKRLLRNI DLHEE +AK    +VEVL QSV++YK QV+EAERKN+FLQEA+NS EGQLLIC KAR+VAT+DY +L E YQEMSIDFMIWR+EY
Subjt:  IQVRKKNKRLLRNIVDLHEETKAK----KVEVLQQSVKKYKYQVMEAERKNKFLQEAINSFEGQLLICRKAREVATDDYIKLKEKYQEMSIDFMIWRDEY

Query:  GILGRKYDGARGQIEQGAKKLTQMARMADQFSVQAMTLRQGIVPTQDSNRELSHFLWIIGQ
          L RKYDGARGQ+EQG +KL QMARM DQF VQA TL++G++P +D+N+ELSHFL IIG+
Subjt:  GILGRKYDGARGQIEQGAKKLTQMARMADQFSVQAMTLRQGIVPTQDSNRELSHFLWIIGQ

KAA0065294.1 glial fibrillary acidic protein-like [Cucumis melo var. makuwa]9.5e-5458.62Show/hide
Query:  IQVRKKNKRLLRNIVDLHEETKAKKV-------------------------------------EVLQQSVKKYKYQVMEAERKNKFLQEAINSFEGQLLI
        IQ+RKKNKRLLRNI +LHEE +AKKV                                     EVLQ  +++YK Q++EA+ KN FLQ+A+NS E QLLI
Subjt:  IQVRKKNKRLLRNIVDLHEETKAKKV-------------------------------------EVLQQSVKKYKYQVMEAERKNKFLQEAINSFEGQLLI

Query:  CRKAREVATDDYIKLKEKYQEMSIDFMIWRDEYGILGRKYDGARGQIEQGAKKLTQMARMADQFSVQAMTLRQGIVPTQDSNRELSHFLWIIGQYLGRFG
        CRKAREV  DDY +L EKYQEMSIDFM+W+DEY  L RKYD A G++E+GA+KL QMAR+ADQFSVQA TLRQG++PT+D+++ELSHFL IIGQ LGRFG
Subjt:  CRKAREVATDDYIKLKEKYQEMSIDFMIWRDEYGILGRKYDGARGQIEQGAKKLTQMARMADQFSVQAMTLRQGIVPTQDSNRELSHFLWIIGQYLGRFG

Query:  CYH
        CYH
Subjt:  CYH

TrEMBL top hitse value%identityAlignment
A0A5A7SM49 Glial fibrillary acidic protein-like1.7e-5359.11Show/hide
Query:  IQVRKKNKRLLRNIVDLHEETKAKKV-------------------------------------EVLQQSVKKYKYQVMEAERKNKFLQEAINSFEGQLLI
        IQVRKKNKRLLRNI +LHEE +A+KV                                     EVLQ S+++YK Q++EAE KN FLQ+A+NS E QLLI
Subjt:  IQVRKKNKRLLRNIVDLHEETKAKKV-------------------------------------EVLQQSVKKYKYQVMEAERKNKFLQEAINSFEGQLLI

Query:  CRKAREVATDDYIKLKEKYQEMSIDFMIWRDEYGILGRKYDGARGQIEQGAKKLTQMARMADQFSVQAMTLRQGIVPTQDSNRELSHFLWIIGQYLGRFG
        CRKAREV TDDY +L EKYQEMSIDFM+W+DEY  L RKYD A  ++E+GA+KL QMA +ADQFSVQA TLRQG++PT+D + ELSHFL IIGQ LGRFG
Subjt:  CRKAREVATDDYIKLKEKYQEMSIDFMIWRDEYGILGRKYDGARGQIEQGAKKLTQMARMADQFSVQAMTLRQGIVPTQDSNRELSHFLWIIGQYLGRFG

Query:  CYH
        CYH
Subjt:  CYH

A0A5A7T0F3 Glial fibrillary acidic protein-like6.0e-5469.33Show/hide
Query:  IQVRKKNKRLLRNIVDLHEETKAK----KVEVLQQSVKKYKYQVMEAERKNKFLQEAINSFEGQLLICRKAREVATDDYIKLKEKYQEMSIDFMIWRDEY
        IQVRKKNK LLRNI +LHEE +AK    ++EVLQ S+K+YK Q+++ E KN+FLQ+A+NS E QLLICRKA+EV TDDY +L EKYQEMSIDFM+W+DEY
Subjt:  IQVRKKNKRLLRNIVDLHEETKAK----KVEVLQQSVKKYKYQVMEAERKNKFLQEAINSFEGQLLICRKAREVATDDYIKLKEKYQEMSIDFMIWRDEY

Query:  GILGRKYDGARGQIEQGAKKLTQMARMADQFSVQAMTLRQGIVPTQDSNRELSHFLWIIGQYL
          L RKYD A G++E+GA+KL QMA MADQFS+QA TLRQG++PT+D+NRELSHFL IIGQYL
Subjt:  GILGRKYDGARGQIEQGAKKLTQMARMADQFSVQAMTLRQGIVPTQDSNRELSHFLWIIGQYL

A0A5A7TXA1 Glial fibrillary acidic protein-like3.1e-5870.59Show/hide
Query:  IQVRKKNKRLLRNIVDLHEETKAKK----VEVLQQSVKKYKYQVMEAERKNKFLQEAINSFEGQLLICRKAREVATDDYIKLKEKYQEMSIDFMIWRDEY
        IQVRKKNKRLLRNI +LHEE +AKK    +EVLQ S+++YK Q++EAE KN FLQ+A+NS E QLLICRKAR+V TDDY +L EKYQEMSIDFM+W+DEY
Subjt:  IQVRKKNKRLLRNIVDLHEETKAKK----VEVLQQSVKKYKYQVMEAERKNKFLQEAINSFEGQLLICRKAREVATDDYIKLKEKYQEMSIDFMIWRDEY

Query:  GILGRKYDGARGQIEQGAKKLTQMARMADQFSVQAMTLRQGIVPTQDSNRELSHFLWIIGQYLGRFGCYH
          L RKYD A G++E+GA+KL QMAR+ADQFSVQA TLRQG++PT+D+++ELSHFL IIGQ LGRF CYH
Subjt:  GILGRKYDGARGQIEQGAKKLTQMARMADQFSVQAMTLRQGIVPTQDSNRELSHFLWIIGQYLGRFGCYH

A0A5A7U875 Glial fibrillary acidic protein-like2.7e-5472.05Show/hide
Query:  IQVRKKNKRLLRNIVDLHEETKAK----KVEVLQQSVKKYKYQVMEAERKNKFLQEAINSFEGQLLICRKAREVATDDYIKLKEKYQEMSIDFMIWRDEY
        IQ+RKKNKRLLRNI DLHEE +AK    +VEVL QSV++YK QV+EAERKN+FLQEA+NS EGQLLIC KAR+VAT+DY +L E YQEMSIDFMIWR+EY
Subjt:  IQVRKKNKRLLRNIVDLHEETKAK----KVEVLQQSVKKYKYQVMEAERKNKFLQEAINSFEGQLLICRKAREVATDDYIKLKEKYQEMSIDFMIWRDEY

Query:  GILGRKYDGARGQIEQGAKKLTQMARMADQFSVQAMTLRQGIVPTQDSNRELSHFLWIIGQ
          L RKYDGARGQ+EQG +KL QMARM DQF VQA TL++G++P +D+N+ELSHFL IIG+
Subjt:  GILGRKYDGARGQIEQGAKKLTQMARMADQFSVQAMTLRQGIVPTQDSNRELSHFLWIIGQ

A0A5A7VDD9 Glial fibrillary acidic protein-like4.6e-5458.62Show/hide
Query:  IQVRKKNKRLLRNIVDLHEETKAKKV-------------------------------------EVLQQSVKKYKYQVMEAERKNKFLQEAINSFEGQLLI
        IQ+RKKNKRLLRNI +LHEE +AKKV                                     EVLQ  +++YK Q++EA+ KN FLQ+A+NS E QLLI
Subjt:  IQVRKKNKRLLRNIVDLHEETKAKKV-------------------------------------EVLQQSVKKYKYQVMEAERKNKFLQEAINSFEGQLLI

Query:  CRKAREVATDDYIKLKEKYQEMSIDFMIWRDEYGILGRKYDGARGQIEQGAKKLTQMARMADQFSVQAMTLRQGIVPTQDSNRELSHFLWIIGQYLGRFG
        CRKAREV  DDY +L EKYQEMSIDFM+W+DEY  L RKYD A G++E+GA+KL QMAR+ADQFSVQA TLRQG++PT+D+++ELSHFL IIGQ LGRFG
Subjt:  CRKAREVATDDYIKLKEKYQEMSIDFMIWRDEYGILGRKYDGARGQIEQGAKKLTQMARMADQFSVQAMTLRQGIVPTQDSNRELSHFLWIIGQYLGRFG

Query:  CYH
        CYH
Subjt:  CYH

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTGATCCAAGTGAGAAAAAAGAATAAGAGATTATTAAGAAACATTGTTGACTTGCATGAAGAGACAAAAGCTAAAAAAGTCGAGGTTCTACAACAATCAGTTAAAAA
ATACAAGTACCAAGTTATGGAAGCGGAAAGAAAGAACAAATTTCTTCAAGAAGCCATTAATAGTTTCGAAGGCCAGTTGCTGATATGTCGTAAGGCTAGAGAGGTCGCAA
CAGATGACTACATCAAGTTAAAAGAAAAATATCAAGAAATGTCAATAGATTTCATGATATGGAGGGACGAATATGGCATACTAGGACGTAAATATGATGGTGCTAGAGGT
CAGATAGAGCAAGGGGCTAAGAAATTAACACAAATGGCGAGGATGGCAGATCAATTCTCAGTGCAAGCTATGACCCTCCGACAAGGCATTGTACCCACACAAGACAGCAA
TAGAGAATTGTCTCATTTTCTATGGATCATAGGGCAATACCTTGGGCGTTTTGGATGCTACCATTAG
mRNA sequenceShow/hide mRNA sequence
ATGGTGATCCAAGTGAGAAAAAAGAATAAGAGATTATTAAGAAACATTGTTGACTTGCATGAAGAGACAAAAGCTAAAAAAGTCGAGGTTCTACAACAATCAGTTAAAAA
ATACAAGTACCAAGTTATGGAAGCGGAAAGAAAGAACAAATTTCTTCAAGAAGCCATTAATAGTTTCGAAGGCCAGTTGCTGATATGTCGTAAGGCTAGAGAGGTCGCAA
CAGATGACTACATCAAGTTAAAAGAAAAATATCAAGAAATGTCAATAGATTTCATGATATGGAGGGACGAATATGGCATACTAGGACGTAAATATGATGGTGCTAGAGGT
CAGATAGAGCAAGGGGCTAAGAAATTAACACAAATGGCGAGGATGGCAGATCAATTCTCAGTGCAAGCTATGACCCTCCGACAAGGCATTGTACCCACACAAGACAGCAA
TAGAGAATTGTCTCATTTTCTATGGATCATAGGGCAATACCTTGGGCGTTTTGGATGCTACCATTAG
Protein sequenceShow/hide protein sequence
MVIQVRKKNKRLLRNIVDLHEETKAKKVEVLQQSVKKYKYQVMEAERKNKFLQEAINSFEGQLLICRKAREVATDDYIKLKEKYQEMSIDFMIWRDEYGILGRKYDGARG
QIEQGAKKLTQMARMADQFSVQAMTLRQGIVPTQDSNRELSHFLWIIGQYLGRFGCYH