; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

PI0000105 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0000105
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionRetrotransposon gag protein
Genome locationchr02:9853438..9854130
RNA-Seq ExpressionPI0000105
SyntenyPI0000105
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0031967.1 retrotransposon gag protein [Cucumis melo var. makuwa]1.2e-8673.91Show/hide
Query:  DRNTVDAAAEGALADKTPTEARELISRMAENSQNSGNRASELNNSLTKEVSELKSQMLSMTTLLTSFVQGGSVKIAKCGVCGLVGHPNDKCPDLVEEANV
        DRNTVDAAA GALA+K PTEARELISRMA+NSQ  GNRASEL NSLTKEVSELKSQML+MTTLLTSFVQG  +K+ KC VCGLVGHPNDKCP+++EE N+
Subjt:  DRNTVDAAAEGALADKTPTEARELISRMAENSQNSGNRASELNNSLTKEVSELKSQMLSMTTLLTSFVQGGSVKIAKCGVCGLVGHPNDKCPDLVEEANV

Query:  IRKYDPHSNTYNARWRDNPNLRWGNDNQRPSQATSSSNNQGTNLEDLVKALATNTISFQNEMKQQMSHLTNAISKLEGKGKLPVQPDHANVSAISLRSGK
        ++KYDP+SNTYN  WRDNP LRWGNDNQ+ +QA ++S+NQ TNL+D++KALATNT+SFQ EMKQQM+ LT  ISK++GKGKLP QP+HANVS ISLRSGK
Subjt:  IRKYDPHSNTYNARWRDNPNLRWGNDNQRPSQATSSSNNQGTNLEDLVKALATNTISFQNEMKQQMSHLTNAISKLEGKGKLPVQPDHANVSAISLRSGK

Query:  ILETPSS-EEKVTSTPILLENNDEKKEEKL
        IL+TPS+ E+KVTS P+ L + +E KEEK+
Subjt:  ILETPSS-EEKVTSTPILLENNDEKKEEKL

KAA0032798.1 retrotransposon gag protein [Cucumis melo var. makuwa]1.3e-8573.48Show/hide
Query:  DRNTVDAAAEGALADKTPTEARELISRMAENSQNSGNRASELNNSLTKEVSELKSQMLSMTTLLTSFVQGGSVKIAKCGVCGLVGHPNDKCPDLVEEANV
        DRN VDAAA GALADKTP EARELI RMAENSQN GNRASEL+NSLTKEVSELKSQML+MTTLLTSFVQG  +K+ KCGVCGLVG+PNDKCP ++E+ N+
Subjt:  DRNTVDAAAEGALADKTPTEARELISRMAENSQNSGNRASELNNSLTKEVSELKSQMLSMTTLLTSFVQGGSVKIAKCGVCGLVGHPNDKCPDLVEEANV

Query:  IRKYDPHSNTYNARWRDNPNLRWGNDNQRPSQATSSSNNQGTNLEDLVKALATNTISFQNEMKQQMSHLTNAISKLEGKGKLPVQPDHANVSAISLRSGK
        +R+YDPH NTYN  WRDNPNLRWGNDNQ+ +QA  +S+NQGTNLED++ ALATNT+SFQ EMKQQM+ LT  +SK++GKGKLP QPDH NVSAISLRSGK
Subjt:  IRKYDPHSNTYNARWRDNPNLRWGNDNQRPSQATSSSNNQGTNLEDLVKALATNTISFQNEMKQQMSHLTNAISKLEGKGKLPVQPDHANVSAISLRSGK

Query:  ILETPSS-EEKVTSTPILLENNDEKKEEKL
        IL+TP++ E+KVTS  + L + ++ KEEK+
Subjt:  ILETPSS-EEKVTSTPILLENNDEKKEEKL

KAA0047407.1 retrotransposon gag protein [Cucumis melo var. makuwa]2.4e-8773.91Show/hide
Query:  DRNTVDAAAEGALADKTPTEARELISRMAENSQNSGNRASELNNSLTKEVSELKSQMLSMTTLLTSFVQGGSVKIAKCGVCGLVGHPNDKCPDLVEEANV
        DRNTVDA A GALADK PTEARELIS+MAENSQ+  NRASEL+NSLTKEVSELKSQML+MTTLLTSFVQG  +K+ KCGVCGLVGHPNDKCP+++E+ N+
Subjt:  DRNTVDAAAEGALADKTPTEARELISRMAENSQNSGNRASELNNSLTKEVSELKSQMLSMTTLLTSFVQGGSVKIAKCGVCGLVGHPNDKCPDLVEEANV

Query:  IRKYDPHSNTYNARWRDNPNLRWGNDNQRPSQATSSSNNQGTNLEDLVKALATNTISFQNEMKQQMSHLTNAISKLEGKGKLPVQPDHANVSAISLRSGK
        +RKYDPH NTYN+ WRDNPNLRWGNDNQ+ +QA S+S+NQGTNLED++KALATNT+SFQ EMKQQM+ LT AISK++GKGKL  Q ++ANVSA+SLRSGK
Subjt:  IRKYDPHSNTYNARWRDNPNLRWGNDNQRPSQATSSSNNQGTNLEDLVKALATNTISFQNEMKQQMSHLTNAISKLEGKGKLPVQPDHANVSAISLRSGK

Query:  ILETPSS-EEKVTSTPILLENNDEKKEEKL
        IL+TP++ E+K TS P+ L   +E KEEK+
Subjt:  ILETPSS-EEKVTSTPILLENNDEKKEEKL

KAA0061138.1 retrotransposon gag protein [Cucumis melo var. makuwa]8.9e-8776.74Show/hide
Query:  DRNTVDAAAEGALADKTPTEARELISRMAENSQNSGNRASELNNSLTKEVSELKSQMLSMTTLLTSFVQGGSVKIAKCGVCGLVGHPNDKCPDLVEEANV
        DRNT+D  A GALADKTPTEARELISRM ENSQ+ GNRASEL+NSLTKEVSELKSQML+MTTLLTSFVQG   K+ KCGVCGLVGHPNDKC  ++E+ N+
Subjt:  DRNTVDAAAEGALADKTPTEARELISRMAENSQNSGNRASELNNSLTKEVSELKSQMLSMTTLLTSFVQGGSVKIAKCGVCGLVGHPNDKCPDLVEEANV

Query:  IRKYDPHSNTYNARWRDNPNLRWGNDNQRPSQATSSSNNQGTNLEDLVKALATNTISFQNEMKQQMSHLTNAISKLEGKGKLPVQPDHANVSAISLRSGK
        +R+YDPHSNTYN+ WRDNPNLRWGNDNQ+ +QA S+S+NQGTNLED++KAL TNT+SFQ EMKQQM+ LT AISK++GKGKLP QPD+ANVSAISLRSGK
Subjt:  IRKYDPHSNTYNARWRDNPNLRWGNDNQRPSQATSSSNNQGTNLEDLVKALATNTISFQNEMKQQMSHLTNAISKLEGKGKLPVQPDHANVSAISLRSGK

Query:  ILETPSSEEKVTSTP
        IL+TP+++EK   TP
Subjt:  ILETPSSEEKVTSTP

TYK07549.1 retrotransposon gag protein [Cucumis melo var. makuwa]3.3e-8975.55Show/hide
Query:  RNTVDAAAEGALADKTPTEARELISRMAENSQNSGNRASELNNSLTKEVSELKSQMLSMTTLLTSFVQGGSVKIAKCGVCGLVGHPNDKCPDLVEEANVI
        RNT+D AA GALADKTPTEARELISRMAENS++ GNRASEL+NSLTKEVSELKSQML+MTTLLTSFVQG   K+ KCGVCGLVGHPNDKCP ++E+ N++
Subjt:  RNTVDAAAEGALADKTPTEARELISRMAENSQNSGNRASELNNSLTKEVSELKSQMLSMTTLLTSFVQGGSVKIAKCGVCGLVGHPNDKCPDLVEEANVI

Query:  RKYDPHSNTYNARWRDNPNLRWGNDNQRPSQATSSSNNQGTNLEDLVKALATNTISFQNEMKQQMSHLTNAISKLEGKGKLPVQPDHANVSAISLRSGKI
        R+YDPHSNTYN+ WRDN NLRWGNDNQ+ +QA S+S+NQGTNLED++KALATNT+SFQ +MKQQM+ LT AISK++GKGKLP QPDHANVSAISLRSGKI
Subjt:  RKYDPHSNTYNARWRDNPNLRWGNDNQRPSQATSSSNNQGTNLEDLVKALATNTISFQNEMKQQMSHLTNAISKLEGKGKLPVQPDHANVSAISLRSGKI

Query:  LETPSS-EEKVTSTPILLENNDEKKEEKL
        L+TP++ E+K+TS P+ L + +E KEEK+
Subjt:  LETPSS-EEKVTSTPILLENNDEKKEEKL

TrEMBL top hitse value%identityAlignment
A0A5A7SQH8 Retrotransposon gag protein6.2e-8673.48Show/hide
Query:  DRNTVDAAAEGALADKTPTEARELISRMAENSQNSGNRASELNNSLTKEVSELKSQMLSMTTLLTSFVQGGSVKIAKCGVCGLVGHPNDKCPDLVEEANV
        DRN VDAAA GALADKTP EARELI RMAENSQN GNRASEL+NSLTKEVSELKSQML+MTTLLTSFVQG  +K+ KCGVCGLVG+PNDKCP ++E+ N+
Subjt:  DRNTVDAAAEGALADKTPTEARELISRMAENSQNSGNRASELNNSLTKEVSELKSQMLSMTTLLTSFVQGGSVKIAKCGVCGLVGHPNDKCPDLVEEANV

Query:  IRKYDPHSNTYNARWRDNPNLRWGNDNQRPSQATSSSNNQGTNLEDLVKALATNTISFQNEMKQQMSHLTNAISKLEGKGKLPVQPDHANVSAISLRSGK
        +R+YDPH NTYN  WRDNPNLRWGNDNQ+ +QA  +S+NQGTNLED++ ALATNT+SFQ EMKQQM+ LT  +SK++GKGKLP QPDH NVSAISLRSGK
Subjt:  IRKYDPHSNTYNARWRDNPNLRWGNDNQRPSQATSSSNNQGTNLEDLVKALATNTISFQNEMKQQMSHLTNAISKLEGKGKLPVQPDHANVSAISLRSGK

Query:  ILETPSS-EEKVTSTPILLENNDEKKEEKL
        IL+TP++ E+KVTS  + L + ++ KEEK+
Subjt:  ILETPSS-EEKVTSTPILLENNDEKKEEKL

A0A5A7SRF5 Retrotransposon gag protein5.6e-8773.91Show/hide
Query:  DRNTVDAAAEGALADKTPTEARELISRMAENSQNSGNRASELNNSLTKEVSELKSQMLSMTTLLTSFVQGGSVKIAKCGVCGLVGHPNDKCPDLVEEANV
        DRNTVDAAA GALA+K PTEARELISRMA+NSQ  GNRASEL NSLTKEVSELKSQML+MTTLLTSFVQG  +K+ KC VCGLVGHPNDKCP+++EE N+
Subjt:  DRNTVDAAAEGALADKTPTEARELISRMAENSQNSGNRASELNNSLTKEVSELKSQMLSMTTLLTSFVQGGSVKIAKCGVCGLVGHPNDKCPDLVEEANV

Query:  IRKYDPHSNTYNARWRDNPNLRWGNDNQRPSQATSSSNNQGTNLEDLVKALATNTISFQNEMKQQMSHLTNAISKLEGKGKLPVQPDHANVSAISLRSGK
        ++KYDP+SNTYN  WRDNP LRWGNDNQ+ +QA ++S+NQ TNL+D++KALATNT+SFQ EMKQQM+ LT  ISK++GKGKLP QP+HANVS ISLRSGK
Subjt:  IRKYDPHSNTYNARWRDNPNLRWGNDNQRPSQATSSSNNQGTNLEDLVKALATNTISFQNEMKQQMSHLTNAISKLEGKGKLPVQPDHANVSAISLRSGK

Query:  ILETPSS-EEKVTSTPILLENNDEKKEEKL
        IL+TPS+ E+KVTS P+ L + +E KEEK+
Subjt:  ILETPSS-EEKVTSTPILLENNDEKKEEKL

A0A5A7V0Q7 Retrotransposon gag protein4.3e-8776.74Show/hide
Query:  DRNTVDAAAEGALADKTPTEARELISRMAENSQNSGNRASELNNSLTKEVSELKSQMLSMTTLLTSFVQGGSVKIAKCGVCGLVGHPNDKCPDLVEEANV
        DRNT+D  A GALADKTPTEARELISRM ENSQ+ GNRASEL+NSLTKEVSELKSQML+MTTLLTSFVQG   K+ KCGVCGLVGHPNDKC  ++E+ N+
Subjt:  DRNTVDAAAEGALADKTPTEARELISRMAENSQNSGNRASELNNSLTKEVSELKSQMLSMTTLLTSFVQGGSVKIAKCGVCGLVGHPNDKCPDLVEEANV

Query:  IRKYDPHSNTYNARWRDNPNLRWGNDNQRPSQATSSSNNQGTNLEDLVKALATNTISFQNEMKQQMSHLTNAISKLEGKGKLPVQPDHANVSAISLRSGK
        +R+YDPHSNTYN+ WRDNPNLRWGNDNQ+ +QA S+S+NQGTNLED++KAL TNT+SFQ EMKQQM+ LT AISK++GKGKLP QPD+ANVSAISLRSGK
Subjt:  IRKYDPHSNTYNARWRDNPNLRWGNDNQRPSQATSSSNNQGTNLEDLVKALATNTISFQNEMKQQMSHLTNAISKLEGKGKLPVQPDHANVSAISLRSGK

Query:  ILETPSSEEKVTSTP
        IL+TP+++EK   TP
Subjt:  ILETPSSEEKVTSTP

A0A5D3CB46 Retrotransposon gag protein1.6e-8975.55Show/hide
Query:  RNTVDAAAEGALADKTPTEARELISRMAENSQNSGNRASELNNSLTKEVSELKSQMLSMTTLLTSFVQGGSVKIAKCGVCGLVGHPNDKCPDLVEEANVI
        RNT+D AA GALADKTPTEARELISRMAENS++ GNRASEL+NSLTKEVSELKSQML+MTTLLTSFVQG   K+ KCGVCGLVGHPNDKCP ++E+ N++
Subjt:  RNTVDAAAEGALADKTPTEARELISRMAENSQNSGNRASELNNSLTKEVSELKSQMLSMTTLLTSFVQGGSVKIAKCGVCGLVGHPNDKCPDLVEEANVI

Query:  RKYDPHSNTYNARWRDNPNLRWGNDNQRPSQATSSSNNQGTNLEDLVKALATNTISFQNEMKQQMSHLTNAISKLEGKGKLPVQPDHANVSAISLRSGKI
        R+YDPHSNTYN+ WRDN NLRWGNDNQ+ +QA S+S+NQGTNLED++KALATNT+SFQ +MKQQM+ LT AISK++GKGKLP QPDHANVSAISLRSGKI
Subjt:  RKYDPHSNTYNARWRDNPNLRWGNDNQRPSQATSSSNNQGTNLEDLVKALATNTISFQNEMKQQMSHLTNAISKLEGKGKLPVQPDHANVSAISLRSGKI

Query:  LETPSS-EEKVTSTPILLENNDEKKEEKL
        L+TP++ E+K+TS P+ L + +E KEEK+
Subjt:  LETPSS-EEKVTSTPILLENNDEKKEEKL

A0A5D3CRR8 Retrotransposon gag protein1.1e-8773.91Show/hide
Query:  DRNTVDAAAEGALADKTPTEARELISRMAENSQNSGNRASELNNSLTKEVSELKSQMLSMTTLLTSFVQGGSVKIAKCGVCGLVGHPNDKCPDLVEEANV
        DRNTVDA A GALADK PTEARELIS+MAENSQ+  NRASEL+NSLTKEVSELKSQML+MTTLLTSFVQG  +K+ KCGVCGLVGHPNDKCP+++E+ N+
Subjt:  DRNTVDAAAEGALADKTPTEARELISRMAENSQNSGNRASELNNSLTKEVSELKSQMLSMTTLLTSFVQGGSVKIAKCGVCGLVGHPNDKCPDLVEEANV

Query:  IRKYDPHSNTYNARWRDNPNLRWGNDNQRPSQATSSSNNQGTNLEDLVKALATNTISFQNEMKQQMSHLTNAISKLEGKGKLPVQPDHANVSAISLRSGK
        +RKYDPH NTYN+ WRDNPNLRWGNDNQ+ +QA S+S+NQGTNLED++KALATNT+SFQ EMKQQM+ LT AISK++GKGKL  Q ++ANVSA+SLRSGK
Subjt:  IRKYDPHSNTYNARWRDNPNLRWGNDNQRPSQATSSSNNQGTNLEDLVKALATNTISFQNEMKQQMSHLTNAISKLEGKGKLPVQPDHANVSAISLRSGK

Query:  ILETPSS-EEKVTSTPILLENNDEKKEEKL
        IL+TP++ E+K TS P+ L   +E KEEK+
Subjt:  ILETPSS-EEKVTSTPILLENNDEKKEEKL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATAGAAATACAGTAGACGCTGCAGCAGAAGGTGCATTAGCTGACAAAACCCCTACTGAGGCGAGAGAGCTCATTTCGAGGATGGCAGAAAATTCACAGAATTCTGG
AAATAGGGCATCCGAGCTCAACAATTCATTGACTAAGGAGGTAAGTGAACTTAAATCACAAATGCTTAGTATGACTACTTTACTAACTTCCTTTGTGCAAGGTGGATCTG
TTAAAATTGCTAAGTGCGGGGTGTGCGGTCTAGTCGGACATCCTAATGACAAGTGCCCTGACTTAGTGGAAGAGGCAAATGTCATTAGGAAGTACGATCCTCATAGCAAT
ACCTACAATGCCCGTTGGAGAGACAACCCTAATCTAAGATGGGGAAACGACAACCAAAGACCCTCGCAAGCAACCTCTTCTTCAAATAATCAAGGTACAAATTTGGAAGA
TTTAGTTAAAGCTCTTGCTACTAATACCATCTCTTTTCAAAATGAAATGAAGCAACAAATGTCTCATCTAACCAATGCGATAAGCAAGCTAGAAGGTAAAGGCAAACTTC
CGGTTCAGCCTGATCATGCAAATGTAAGTGCCATCTCACTTAGAAGCGGTAAAATTCTGGAAACCCCTTCAAGTGAAGAAAAGGTAACTTCTACCCCTATCCTTCTAGAA
AATAATGATGAGAAAAAGGAAGAAAAATTATAA
mRNA sequenceShow/hide mRNA sequence
ATGGATAGAAATACAGTAGACGCTGCAGCAGAAGGTGCATTAGCTGACAAAACCCCTACTGAGGCGAGAGAGCTCATTTCGAGGATGGCAGAAAATTCACAGAATTCTGG
AAATAGGGCATCCGAGCTCAACAATTCATTGACTAAGGAGGTAAGTGAACTTAAATCACAAATGCTTAGTATGACTACTTTACTAACTTCCTTTGTGCAAGGTGGATCTG
TTAAAATTGCTAAGTGCGGGGTGTGCGGTCTAGTCGGACATCCTAATGACAAGTGCCCTGACTTAGTGGAAGAGGCAAATGTCATTAGGAAGTACGATCCTCATAGCAAT
ACCTACAATGCCCGTTGGAGAGACAACCCTAATCTAAGATGGGGAAACGACAACCAAAGACCCTCGCAAGCAACCTCTTCTTCAAATAATCAAGGTACAAATTTGGAAGA
TTTAGTTAAAGCTCTTGCTACTAATACCATCTCTTTTCAAAATGAAATGAAGCAACAAATGTCTCATCTAACCAATGCGATAAGCAAGCTAGAAGGTAAAGGCAAACTTC
CGGTTCAGCCTGATCATGCAAATGTAAGTGCCATCTCACTTAGAAGCGGTAAAATTCTGGAAACCCCTTCAAGTGAAGAAAAGGTAACTTCTACCCCTATCCTTCTAGAA
AATAATGATGAGAAAAAGGAAGAAAAATTATAA
Protein sequenceShow/hide protein sequence
MDRNTVDAAAEGALADKTPTEARELISRMAENSQNSGNRASELNNSLTKEVSELKSQMLSMTTLLTSFVQGGSVKIAKCGVCGLVGHPNDKCPDLVEEANVIRKYDPHSN
TYNARWRDNPNLRWGNDNQRPSQATSSSNNQGTNLEDLVKALATNTISFQNEMKQQMSHLTNAISKLEGKGKLPVQPDHANVSAISLRSGKILETPSSEEKVTSTPILLE
NNDEKKEEKL