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PI0000117 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0000117
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionU3 small nucleolar RNA-associated protein 14 homolog A
Genome locationchr01:24930429..24931113
RNA-Seq ExpressionPI0000117
SyntenyPI0000117
Gene Ontology termsGO:0000160 - phosphorelay signal transduction system (biological process)
GO:0006364 - rRNA processing (biological process)
GO:0005730 - nucleolus (cellular component)
GO:0032040 - small-subunit processome (cellular component)
GO:0003677 - DNA binding (molecular function)
InterPro domainsIPR006709 - Small-subunit processome, Utp14


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0067990.1 U3 small nucleolar RNA-associated protein 14-like protein A isoform X1 [Cucumis melo var. makuwa]1.1e-3779.25Show/hide
Query:  RRGRKLSRIEGCKSQHVIISEKLDKKAEKLYTKTLPFPYTEKDVFEHSIRMPIGPDFNPTSAIGALNRPEVVKKSGVIIKPIEFEEVDPHQKVEEHKQKD
        +R   L   +    +HVIISEK+DKKAEKLYTKTLPFPYTEKDVFEHSIRMPIGPDFNPTSA+GALNRPEVVKKSGVIIKPIEFEEVD HQKVEEHKQK 
Subjt:  RRGRKLSRIEGCKSQHVIISEKLDKKAEKLYTKTLPFPYTEKDVFEHSIRMPIGPDFNPTSAIGALNRPEVVKKSGVIIKPIEFEEVDPHQKVEEHKQKD

Query:  RNKEKK
        + +++K
Subjt:  RNKEKK
TYK18136.1 U3 small nucleolar RNA-associated protein 14-like protein A isoform X2 [Cucumis melo var. makuwa]1.1e-3779.25Show/hide
Query:  RRGRKLSRIEGCKSQHVIISEKLDKKAEKLYTKTLPFPYTEKDVFEHSIRMPIGPDFNPTSAIGALNRPEVVKKSGVIIKPIEFEEVDPHQKVEEHKQKD
        +R   L   +    +HVIISEK+DKKAEKLYTKTLPFPYTEKDVFEHSIRMPIGPDFNPTSA+GALNRPEVVKKSGVIIKPIEFEEVD HQKVEEHKQK 
Subjt:  RRGRKLSRIEGCKSQHVIISEKLDKKAEKLYTKTLPFPYTEKDVFEHSIRMPIGPDFNPTSAIGALNRPEVVKKSGVIIKPIEFEEVDPHQKVEEHKQKD

Query:  RNKEKK
        + +++K
Subjt:  RNKEKK
XP_004136023.1 U3 small nucleolar RNA-associated protein 14 homolog A [Cucumis sativus]1.3e-3881.13Show/hide
Query:  RRGRKLSRIEGCKSQHVIISEKLDKKAEKLYTKTLPFPYTEKDVFEHSIRMPIGPDFNPTSAIGALNRPEVVKKSGVIIKPIEFEEVDPHQKVEEHKQKD
        +R   L   +    +HVIISEKLDKKAEKLYTKTLPFPYTEKDVFEHSIRMPIGPDFNPTS IGALNRPEVVKKSGVIIKPIEFEEVDPHQKVEEHKQK 
Subjt:  RRGRKLSRIEGCKSQHVIISEKLDKKAEKLYTKTLPFPYTEKDVFEHSIRMPIGPDFNPTSAIGALNRPEVVKKSGVIIKPIEFEEVDPHQKVEEHKQKD

Query:  RNKEKK
        + +++K
Subjt:  RNKEKK
XP_008451560.1 PREDICTED: U3 small nucleolar RNA-associated protein 14 homolog A isoform X1 [Cucumis melo]1.1e-3779.25Show/hide
Query:  RRGRKLSRIEGCKSQHVIISEKLDKKAEKLYTKTLPFPYTEKDVFEHSIRMPIGPDFNPTSAIGALNRPEVVKKSGVIIKPIEFEEVDPHQKVEEHKQKD
        +R   L   +    +HVIISEK+DKKAEKLYTKTLPFPYTEKDVFEHSIRMPIGPDFNPTSA+GALNRPEVVKKSGVIIKPIEFEEVD HQKVEEHKQK 
Subjt:  RRGRKLSRIEGCKSQHVIISEKLDKKAEKLYTKTLPFPYTEKDVFEHSIRMPIGPDFNPTSAIGALNRPEVVKKSGVIIKPIEFEEVDPHQKVEEHKQKD

Query:  RNKEKK
        + +++K
Subjt:  RNKEKK
XP_008451562.1 PREDICTED: U3 small nucleolar RNA-associated protein 14 homolog A isoform X2 [Cucumis melo]1.1e-3779.25Show/hide
Query:  RRGRKLSRIEGCKSQHVIISEKLDKKAEKLYTKTLPFPYTEKDVFEHSIRMPIGPDFNPTSAIGALNRPEVVKKSGVIIKPIEFEEVDPHQKVEEHKQKD
        +R   L   +    +HVIISEK+DKKAEKLYTKTLPFPYTEKDVFEHSIRMPIGPDFNPTSA+GALNRPEVVKKSGVIIKPIEFEEVD HQKVEEHKQK 
Subjt:  RRGRKLSRIEGCKSQHVIISEKLDKKAEKLYTKTLPFPYTEKDVFEHSIRMPIGPDFNPTSAIGALNRPEVVKKSGVIIKPIEFEEVDPHQKVEEHKQKD

Query:  RNKEKK
        + +++K
Subjt:  RNKEKK
TrEMBL top hitse value%identityAlignment
A0A0A0K5G1 Uncharacterized protein6.2e-3981.13Show/hide
Query:  RRGRKLSRIEGCKSQHVIISEKLDKKAEKLYTKTLPFPYTEKDVFEHSIRMPIGPDFNPTSAIGALNRPEVVKKSGVIIKPIEFEEVDPHQKVEEHKQKD
        +R   L   +    +HVIISEKLDKKAEKLYTKTLPFPYTEKDVFEHSIRMPIGPDFNPTS IGALNRPEVVKKSGVIIKPIEFEEVDPHQKVEEHKQK 
Subjt:  RRGRKLSRIEGCKSQHVIISEKLDKKAEKLYTKTLPFPYTEKDVFEHSIRMPIGPDFNPTSAIGALNRPEVVKKSGVIIKPIEFEEVDPHQKVEEHKQKD

Query:  RNKEKK
        + +++K
Subjt:  RNKEKK
A0A1S3BSJ8 U3 small nucleolar RNA-associated protein 14 homolog A isoform X15.3e-3879.25Show/hide
Query:  RRGRKLSRIEGCKSQHVIISEKLDKKAEKLYTKTLPFPYTEKDVFEHSIRMPIGPDFNPTSAIGALNRPEVVKKSGVIIKPIEFEEVDPHQKVEEHKQKD
        +R   L   +    +HVIISEK+DKKAEKLYTKTLPFPYTEKDVFEHSIRMPIGPDFNPTSA+GALNRPEVVKKSGVIIKPIEFEEVD HQKVEEHKQK 
Subjt:  RRGRKLSRIEGCKSQHVIISEKLDKKAEKLYTKTLPFPYTEKDVFEHSIRMPIGPDFNPTSAIGALNRPEVVKKSGVIIKPIEFEEVDPHQKVEEHKQKD

Query:  RNKEKK
        + +++K
Subjt:  RNKEKK
A0A1S3BSV8 U3 small nucleolar RNA-associated protein 14 homolog A isoform X25.3e-3879.25Show/hide
Query:  RRGRKLSRIEGCKSQHVIISEKLDKKAEKLYTKTLPFPYTEKDVFEHSIRMPIGPDFNPTSAIGALNRPEVVKKSGVIIKPIEFEEVDPHQKVEEHKQKD
        +R   L   +    +HVIISEK+DKKAEKLYTKTLPFPYTEKDVFEHSIRMPIGPDFNPTSA+GALNRPEVVKKSGVIIKPIEFEEVD HQKVEEHKQK 
Subjt:  RRGRKLSRIEGCKSQHVIISEKLDKKAEKLYTKTLPFPYTEKDVFEHSIRMPIGPDFNPTSAIGALNRPEVVKKSGVIIKPIEFEEVDPHQKVEEHKQKD

Query:  RNKEKK
        + +++K
Subjt:  RNKEKK
A0A5A7VL94 U3 small nucleolar RNA-associated protein 14-like protein A isoform X15.3e-3879.25Show/hide
Query:  RRGRKLSRIEGCKSQHVIISEKLDKKAEKLYTKTLPFPYTEKDVFEHSIRMPIGPDFNPTSAIGALNRPEVVKKSGVIIKPIEFEEVDPHQKVEEHKQKD
        +R   L   +    +HVIISEK+DKKAEKLYTKTLPFPYTEKDVFEHSIRMPIGPDFNPTSA+GALNRPEVVKKSGVIIKPIEFEEVD HQKVEEHKQK 
Subjt:  RRGRKLSRIEGCKSQHVIISEKLDKKAEKLYTKTLPFPYTEKDVFEHSIRMPIGPDFNPTSAIGALNRPEVVKKSGVIIKPIEFEEVDPHQKVEEHKQKD

Query:  RNKEKK
        + +++K
Subjt:  RNKEKK
A0A5D3D3T7 U3 small nucleolar RNA-associated protein 14-like protein A isoform X25.3e-3879.25Show/hide
Query:  RRGRKLSRIEGCKSQHVIISEKLDKKAEKLYTKTLPFPYTEKDVFEHSIRMPIGPDFNPTSAIGALNRPEVVKKSGVIIKPIEFEEVDPHQKVEEHKQKD
        +R   L   +    +HVIISEK+DKKAEKLYTKTLPFPYTEKDVFEHSIRMPIGPDFNPTSA+GALNRPEVVKKSGVIIKPIEFEEVD HQKVEEHKQK 
Subjt:  RRGRKLSRIEGCKSQHVIISEKLDKKAEKLYTKTLPFPYTEKDVFEHSIRMPIGPDFNPTSAIGALNRPEVVKKSGVIIKPIEFEEVDPHQKVEEHKQKD

Query:  RNKEKK
        + +++K
Subjt:  RNKEKK
SwissProt top hitse value%identityAlignment
P87137 Uncharacterized protein C57A7.062.9e-0937.66Show/hide
Query:  SRIEGCKSQHVIISEKLDKKAEKLYTKTLPFPYTEKDVFEHSIRMPIGPDFNPTSAIGALNRPEVVKKSGVIIKPIE
        S+ +  K +HVII+EK +KKA KL   ++PFP+  ++ +E S+ +P+GP++   ++      P VV K G +I PI+
Subjt:  SRIEGCKSQHVIISEKLDKKAEKLYTKTLPFPYTEKDVFEHSIRMPIGPDFNPTSAIGALNRPEVVKKSGVIIKPIE
Q04500 U3 small nucleolar RNA-associated protein 147.1e-0836.23Show/hide
Query:  QHVIISEKLDKKAEKLYTKTLPFPYTEKDVFEHSIRMPIGPDFNPTSAIGALNRPEVVKKSGVIIKPIE
        Q+VII+EK++KK  K  +  +PFP+  ++ +E S+RMPIG ++   ++   L +P ++ K G +I P++
Subjt:  QHVIISEKLDKKAEKLYTKTLPFPYTEKDVFEHSIRMPIGPDFNPTSAIGALNRPEVVKKSGVIIKPIE
Q640M1 U3 small nucleolar RNA-associated protein 14 homolog A1.1e-0845.21Show/hide
Query:  HVIISEKLDKKAEKLYTKTLPFPYTEKDVFEHSIRMPIGPDFNPTSAIGALNRPEVVKKSGVIIKPIEFEEVD
        +VIISEK +  A     + LP+P+T    FE +I+ PIG  +N   A   L  P+VV K G IIKPI  E+VD
Subjt:  HVIISEKLDKKAEKLYTKTLPFPYTEKDVFEHSIRMPIGPDFNPTSAIGALNRPEVVKKSGVIIKPIEFEEVD
Arabidopsis top hitse value%identityAlignment
AT4G02400.1 U3 ribonucleoprotein (Utp) family protein6.2e-3157.27Show/hide
Query:  MNLQTRRGRKLSRIEGCKSQHVIISEKLDKKAEKLYTKTLPFPYTEKDVFEHSIRMPIGPDFNPTSAIGALNRPEVVKKSGVIIKPIEFEEVDPHQKVEE
        ++L+TR+  +L        ++VIISEK+DKKA+KL+T TLPFPYT K+VFEHS+RMPIGP+FNP + +GALNRPEVVKK+GVIIKP++FEEV+P++K ++
Subjt:  MNLQTRRGRKLSRIEGCKSQHVIISEKLDKKAEKLYTKTLPFPYTEKDVFEHSIRMPIGPDFNPTSAIGALNRPEVVKKSGVIIKPIEFEEVDPHQKVEE

Query:  HKQKDRNKEK
           +   K++
Subjt:  HKQKDRNKEK
AT5G08600.1 U3 ribonucleoprotein (Utp) family protein5.2e-3060.58Show/hide
Query:  RGRKLSRIEGCKSQHVIISEKLDKKAEKLYTKTLPFPYTEKDVFEHSIRMPIGPDFNPTSAIGALNRPEVVKKSGVIIKPIEFEEVDPHQKVEEHKQKDR
        R + L + +    +HVIISEK+DKKAEKL TK+LP+PYT K+VFE S+RMPIGP+FNPT+ +G LNRPEVVKK+GVIIKP++FEEV+P+ +     QK +
Subjt:  RGRKLSRIEGCKSQHVIISEKLDKKAEKLYTKTLPFPYTEKDVFEHSIRMPIGPDFNPTSAIGALNRPEVVKKSGVIIKPIEFEEVDPHQKVEEHKQKDR

Query:  NKEK
         K+K
Subjt:  NKEK
AT5G08600.2 U3 ribonucleoprotein (Utp) family protein5.2e-3060.58Show/hide
Query:  RGRKLSRIEGCKSQHVIISEKLDKKAEKLYTKTLPFPYTEKDVFEHSIRMPIGPDFNPTSAIGALNRPEVVKKSGVIIKPIEFEEVDPHQKVEEHKQKDR
        R + L + +    +HVIISEK+DKKAEKL TK+LP+PYT K+VFE S+RMPIGP+FNPT+ +G LNRPEVVKK+GVIIKP++FEEV+P+ +     QK +
Subjt:  RGRKLSRIEGCKSQHVIISEKLDKKAEKLYTKTLPFPYTEKDVFEHSIRMPIGPDFNPTSAIGALNRPEVVKKSGVIIKPIEFEEVDPHQKVEEHKQKDR

Query:  NKEK
         K+K
Subjt:  NKEK

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAACTTGCAAACAAGAAGAGGCAGGAAGCTCTCAAGAATAGAAGGATGCAAATCTCAACATGTTATCATCTCTGAGAAGTTGGATAAAAAGGCTGAGAAACTCTACAC
AAAGACTCTTCCTTTTCCTTATACAGAAAAAGATGTATTTGAACACAGTATCCGCATGCCAATCGGTCCAGATTTCAACCCGACATCTGCAATTGGGGCTCTTAATCGGC
CTGAGGTCGTGAAGAAGTCGGGTGTCATTATAAAACCAATTGAGTTTGAGGAAGTTGATCCTCACCAGAAAGTTGAGGAGCACAAACAGAAGGACAGAAACAAAGAGAAA
AAATGGTAA
mRNA sequenceShow/hide mRNA sequence
ATGAACTTGCAAACAAGAAGAGGCAGGAAGCTCTCAAGAATAGAAGGATGCAAATCTCAACATGTTATCATCTCTGAGAAGTTGGATAAAAAGGCTGAGAAACTCTACAC
AAAGACTCTTCCTTTTCCTTATACAGAAAAAGATGTATTTGAACACAGTATCCGCATGCCAATCGGTCCAGATTTCAACCCGACATCTGCAATTGGGGCTCTTAATCGGC
CTGAGGTCGTGAAGAAGTCGGGTGTCATTATAAAACCAATTGAGTTTGAGGAAGTTGATCCTCACCAGAAAGTTGAGGAGCACAAACAGAAGGACAGAAACAAAGAGAAA
AAATGGTAA
Protein sequenceShow/hide protein sequence
MNLQTRRGRKLSRIEGCKSQHVIISEKLDKKAEKLYTKTLPFPYTEKDVFEHSIRMPIGPDFNPTSAIGALNRPEVVKKSGVIIKPIEFEEVDPHQKVEEHKQKDRNKEK
KW