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PI0000118 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0000118
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionRetrovirus-related Pol polyprotein from transposon TNT 1-94
Genome locationchr03:24148344..24149060
RNA-Seq ExpressionPI0000118
SyntenyPI0000118
Gene Ontology termsGO:0006749 - glutathione metabolic process (biological process)
GO:0016021 - integral component of membrane (cellular component)
GO:0003676 - nucleic acid binding (molecular function)
GO:0004364 - glutathione transferase activity (molecular function)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0048297.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa]4.3e-4351.98Show/hide
Query:  MGNHSSLLSVENSEASSPINQTFGLGNKISLLKLSVDNFFLWKFQILTALETYDLESFLESESKPPSKFLTPTESSSTSAARTQNLEYK-----------
        M + SSLL VEN+EASSPINQ FG GNKISL+KL+ D F LWKFQILTALE YDLE+FLESES+PPSK+L  TESSS SA  T N  YK           
Subjt:  MGNHSSLLSVENSEASSPINQTFGLGNKISLLKLSVDNFFLWKFQILTALETYDLESFLESESKPPSKFLTPTESSSTSAARTQNLEYK-----------

Query:  ----------------------------------------------------------------QYVDALASINKPISSNDHILYILAGLGSDYQSMLSV
                                                                        Q VDALASINKP+SS+DHILYILAGLGSDYQSM+SV
Subjt:  ----------------------------------------------------------------QYVDALASINKPISSNDHILYILAGLGSDYQSMLSV

Query:  ISARTESPSIQEVMSLLLTQESKMKAK
        ISART+SPS+QEVMSLLLTQES+ ++K
Subjt:  ISARTESPSIQEVMSLLLTQESKMKAK

KAA0053143.1 keratin, type II cytoskeletal 1-like [Cucumis melo var. makuwa]2.4e-3848.52Show/hide
Query:  MGNHSSLLSVENSEASSPINQTFGLGNKISLLKLSVDNFFLWKFQILTALETYDLESFLESESKPPSKFLTPTESSSTSAARTQNLEYK-----------
        M ++SS L VEN+E S      FG GNKISL+KLS DNF LWKFQILTALE YDLE+F ESE +PPSK+LT T SSSTSA RT N EYK           
Subjt:  MGNHSSLLSVENSEASSPINQTFGLGNKISLLKLSVDNFFLWKFQILTALETYDLESFLESESKPPSKFLTPTESSSTSAARTQNLEYK-----------

Query:  ----------------------------------------------------------------QYVDALASINKPISSNDHILYILAGLGSDYQSMLSV
                                                                        Q VDALASINKP+SS+DHILYIL GLG DYQSM+S+
Subjt:  ----------------------------------------------------------------QYVDALASINKPISSNDHILYILAGLGSDYQSMLSV

Query:  ISARTESPSIQEVMSLLLTQESKMKAK--QSVKLPYL
        ISART+SPSIQEVMSLLLTQES+ ++K      LPY+
Subjt:  ISARTESPSIQEVMSLLLTQESKMKAK--QSVKLPYL

KAA0067213.1 keratin, type II cytoskeletal 1-like [Cucumis melo var. makuwa]6.6e-3649.52Show/hide
Query:  MGNHSSLLSVENSEASSPINQTFGLGNKISLLKLSVDNFFLWKFQILTALETYDLESFLESESKPPSKFLTPTESSSTSAARTQNLEYKQY---------
        M + SSLL VEN+EASSPINQ FG  NKISL+KLS DNF LWKFQILTALE YDLE+FLESES+PPSK+L  T SSS SA RT N  YK +         
Subjt:  MGNHSSLLSVENSEASSPINQTFGLGNKISLLKLSVDNFFLWKFQILTALETYDLESFLESESKPPSKFLTPTESSSTSAARTQNLEYKQY---------

Query:  ------------------------------------------------------------------VDALASINKPISSNDHILYILAGLGSDYQSMLSV
                                                                          VDALASINKP+SS+DHILYILAGLGSDYQSM+SV
Subjt:  ------------------------------------------------------------------VDALASINKPISSNDHILYILAGLGSDYQSMLSV

Query:  ISARTESPSI
        I  RTESPS+
Subjt:  ISARTESPSI

TYK10642.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa]4.3e-4351.98Show/hide
Query:  MGNHSSLLSVENSEASSPINQTFGLGNKISLLKLSVDNFFLWKFQILTALETYDLESFLESESKPPSKFLTPTESSSTSAARTQNLEYK-----------
        M + SSLL VEN+EASSPINQ FG GNKISL+KL+ D F LWKFQILTALE YDLE+FLESES+PPSK+L  TESSS SA  T N  YK           
Subjt:  MGNHSSLLSVENSEASSPINQTFGLGNKISLLKLSVDNFFLWKFQILTALETYDLESFLESESKPPSKFLTPTESSSTSAARTQNLEYK-----------

Query:  ----------------------------------------------------------------QYVDALASINKPISSNDHILYILAGLGSDYQSMLSV
                                                                        Q VDALASINKP+SS+DHILYILAGLGSDYQSM+SV
Subjt:  ----------------------------------------------------------------QYVDALASINKPISSNDHILYILAGLGSDYQSMLSV

Query:  ISARTESPSIQEVMSLLLTQESKMKAK
        ISART+SPS+QEVMSLLLTQES+ ++K
Subjt:  ISARTESPSIQEVMSLLLTQESKMKAK

TYK18917.1 keratin, type II cytoskeletal 1-like [Cucumis melo var. makuwa]4.5e-3248.5Show/hide
Query:  MGNHSSLLSVENSEASSPINQTFGLGNKISLLKLSVDNFFLWKFQILTALETYDLESFLESESKPPSKFLTPTESSSTSAARTQNLEYKQY---------
        M + SSLL VEN+EASSPINQ FG  NKISL+KLS DNF LWKFQILTALE YDLE+FLESES+PPSK+L  T SSS SA RT N  YK +         
Subjt:  MGNHSSLLSVENSEASSPINQTFGLGNKISLLKLSVDNFFLWKFQILTALETYDLESFLESESKPPSKFLTPTESSSTSAARTQNLEYKQY---------

Query:  ------------------------------------------------------------------VDALASINKPISSNDHILYILAGLGSDYQSMLSV
                                                                          VDALASINKP+SS+DHILYILAGLGSDYQSM+SV
Subjt:  ------------------------------------------------------------------VDALASINKPISSNDHILYILAGLGSDYQSMLSV

TrEMBL top hitse value%identityAlignment
A0A5A7U233 Retrovirus-related Pol polyprotein from transposon TNT 1-942.1e-4351.98Show/hide
Query:  MGNHSSLLSVENSEASSPINQTFGLGNKISLLKLSVDNFFLWKFQILTALETYDLESFLESESKPPSKFLTPTESSSTSAARTQNLEYK-----------
        M + SSLL VEN+EASSPINQ FG GNKISL+KL+ D F LWKFQILTALE YDLE+FLESES+PPSK+L  TESSS SA  T N  YK           
Subjt:  MGNHSSLLSVENSEASSPINQTFGLGNKISLLKLSVDNFFLWKFQILTALETYDLESFLESESKPPSKFLTPTESSSTSAARTQNLEYK-----------

Query:  ----------------------------------------------------------------QYVDALASINKPISSNDHILYILAGLGSDYQSMLSV
                                                                        Q VDALASINKP+SS+DHILYILAGLGSDYQSM+SV
Subjt:  ----------------------------------------------------------------QYVDALASINKPISSNDHILYILAGLGSDYQSMLSV

Query:  ISARTESPSIQEVMSLLLTQESKMKAK
        ISART+SPS+QEVMSLLLTQES+ ++K
Subjt:  ISARTESPSIQEVMSLLLTQESKMKAK

A0A5A7UB21 Keratin, type II cytoskeletal 1-like1.2e-3848.52Show/hide
Query:  MGNHSSLLSVENSEASSPINQTFGLGNKISLLKLSVDNFFLWKFQILTALETYDLESFLESESKPPSKFLTPTESSSTSAARTQNLEYK-----------
        M ++SS L VEN+E S      FG GNKISL+KLS DNF LWKFQILTALE YDLE+F ESE +PPSK+LT T SSSTSA RT N EYK           
Subjt:  MGNHSSLLSVENSEASSPINQTFGLGNKISLLKLSVDNFFLWKFQILTALETYDLESFLESESKPPSKFLTPTESSSTSAARTQNLEYK-----------

Query:  ----------------------------------------------------------------QYVDALASINKPISSNDHILYILAGLGSDYQSMLSV
                                                                        Q VDALASINKP+SS+DHILYIL GLG DYQSM+S+
Subjt:  ----------------------------------------------------------------QYVDALASINKPISSNDHILYILAGLGSDYQSMLSV

Query:  ISARTESPSIQEVMSLLLTQESKMKAK--QSVKLPYL
        ISART+SPSIQEVMSLLLTQES+ ++K      LPY+
Subjt:  ISARTESPSIQEVMSLLLTQESKMKAK--QSVKLPYL

A0A5A7VGJ8 Keratin, type II cytoskeletal 1-like3.2e-3649.52Show/hide
Query:  MGNHSSLLSVENSEASSPINQTFGLGNKISLLKLSVDNFFLWKFQILTALETYDLESFLESESKPPSKFLTPTESSSTSAARTQNLEYKQY---------
        M + SSLL VEN+EASSPINQ FG  NKISL+KLS DNF LWKFQILTALE YDLE+FLESES+PPSK+L  T SSS SA RT N  YK +         
Subjt:  MGNHSSLLSVENSEASSPINQTFGLGNKISLLKLSVDNFFLWKFQILTALETYDLESFLESESKPPSKFLTPTESSSTSAARTQNLEYKQY---------

Query:  ------------------------------------------------------------------VDALASINKPISSNDHILYILAGLGSDYQSMLSV
                                                                          VDALASINKP+SS+DHILYILAGLGSDYQSM+SV
Subjt:  ------------------------------------------------------------------VDALASINKPISSNDHILYILAGLGSDYQSMLSV

Query:  ISARTESPSI
        I  RTESPS+
Subjt:  ISARTESPSI

A0A5D3CH97 Retrovirus-related Pol polyprotein from transposon TNT 1-942.1e-4351.98Show/hide
Query:  MGNHSSLLSVENSEASSPINQTFGLGNKISLLKLSVDNFFLWKFQILTALETYDLESFLESESKPPSKFLTPTESSSTSAARTQNLEYK-----------
        M + SSLL VEN+EASSPINQ FG GNKISL+KL+ D F LWKFQILTALE YDLE+FLESES+PPSK+L  TESSS SA  T N  YK           
Subjt:  MGNHSSLLSVENSEASSPINQTFGLGNKISLLKLSVDNFFLWKFQILTALETYDLESFLESESKPPSKFLTPTESSSTSAARTQNLEYK-----------

Query:  ----------------------------------------------------------------QYVDALASINKPISSNDHILYILAGLGSDYQSMLSV
                                                                        Q VDALASINKP+SS+DHILYILAGLGSDYQSM+SV
Subjt:  ----------------------------------------------------------------QYVDALASINKPISSNDHILYILAGLGSDYQSMLSV

Query:  ISARTESPSIQEVMSLLLTQESKMKAK
        ISART+SPS+QEVMSLLLTQES+ ++K
Subjt:  ISARTESPSIQEVMSLLLTQESKMKAK

A0A5D3D5T2 Keratin, type II cytoskeletal 1-like2.2e-3248.5Show/hide
Query:  MGNHSSLLSVENSEASSPINQTFGLGNKISLLKLSVDNFFLWKFQILTALETYDLESFLESESKPPSKFLTPTESSSTSAARTQNLEYKQY---------
        M + SSLL VEN+EASSPINQ FG  NKISL+KLS DNF LWKFQILTALE YDLE+FLESES+PPSK+L  T SSS SA RT N  YK +         
Subjt:  MGNHSSLLSVENSEASSPINQTFGLGNKISLLKLSVDNFFLWKFQILTALETYDLESFLESESKPPSKFLTPTESSSTSAARTQNLEYKQY---------

Query:  ------------------------------------------------------------------VDALASINKPISSNDHILYILAGLGSDYQSMLSV
                                                                          VDALASINKP+SS+DHILYILAGLGSDYQSM+SV
Subjt:  ------------------------------------------------------------------VDALASINKPISSNDHILYILAGLGSDYQSMLSV

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT5G48050.1 CONTAINS InterPro DOMAIN/s: Retrotransposon gag protein (InterPro:IPR005162)7.1e-0432.39Show/hide
Query:  KQYVDALASINKPISSNDHILYILAGLGSDYQSMLSVISARTESPSIQEVMSLLLTQESKMKAKQSVKLPY
        K   D L +++ PIS    ++++L GL   Y  +L+VI  ++  PS  E  S+LL +ES++  K    L +
Subjt:  KQYVDALASINKPISSNDHILYILAGLGSDYQSMLSVISARTESPSIQEVMSLLLTQESKMKAKQSVKLPY


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGTAACCACTCATCTCTACTTAGTGTTGAGAACTCTGAAGCATCCTCACCGATTAATCAAACATTTGGATTGGGCAACAAAATATCACTCTTAAAGCTCAGCGTTGA
TAACTTCTTCCTATGGAAGTTCCAAATCCTCACAGCACTAGAAACTTATGACCTGGAAAGCTTCCTTGAATCTGAATCGAAACCACCTTCAAAATTTCTTACACCCACTG
AAAGTTCATCAACCTCTGCTGCAAGAACACAAAATCTGGAGTATAAGCAGTATGTTGATGCCTTAGCTTCAATTAACAAACCAATTTCATCTAATGATCATATACTGTAC
ATATTAGCTGGTTTAGGATCTGATTATCAATCCATGCTATCTGTGATTTCTGCCAGAACTGAGTCCCCTTCTATACAAGAAGTTATGTCCTTATTACTTACTCAAGAATC
CAAAATGAAAGCAAAACAATCAGTGAAACTGCCCTACCTTCTGCCAATATAG
mRNA sequenceShow/hide mRNA sequence
ATGGGTAACCACTCATCTCTACTTAGTGTTGAGAACTCTGAAGCATCCTCACCGATTAATCAAACATTTGGATTGGGCAACAAAATATCACTCTTAAAGCTCAGCGTTGA
TAACTTCTTCCTATGGAAGTTCCAAATCCTCACAGCACTAGAAACTTATGACCTGGAAAGCTTCCTTGAATCTGAATCGAAACCACCTTCAAAATTTCTTACACCCACTG
AAAGTTCATCAACCTCTGCTGCAAGAACACAAAATCTGGAGTATAAGCAGTATGTTGATGCCTTAGCTTCAATTAACAAACCAATTTCATCTAATGATCATATACTGTAC
ATATTAGCTGGTTTAGGATCTGATTATCAATCCATGCTATCTGTGATTTCTGCCAGAACTGAGTCCCCTTCTATACAAGAAGTTATGTCCTTATTACTTACTCAAGAATC
CAAAATGAAAGCAAAACAATCAGTGAAACTGCCCTACCTTCTGCCAATATAG
Protein sequenceShow/hide protein sequence
MGNHSSLLSVENSEASSPINQTFGLGNKISLLKLSVDNFFLWKFQILTALETYDLESFLESESKPPSKFLTPTESSSTSAARTQNLEYKQYVDALASINKPISSNDHILY
ILAGLGSDYQSMLSVISARTESPSIQEVMSLLLTQESKMKAKQSVKLPYLLPI