; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

PI0000123 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0000123
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
Descriptioncold-regulated 413 inner membrane protein 1, chloroplastic-like
Genome locationchr12:6049068..6051537
RNA-Seq ExpressionPI0000123
SyntenyPI0000123
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR008892 - Cold-regulated 413 protein


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004147401.1 cold-regulated 413 inner membrane protein 2, chloroplastic [Cucumis sativus]2.2e-10995.63Show/hide
Query:  MVCVSLSSAISLYTPSFYKSKLSVPLSLRSSPPNAKLSFNPAAKQSSICYNPLRFAVGSEGIATAGINKKKSRGLSAVCYAMPVNTRTLQWISTISSVVL
        MVCVSLSSA+SLY PSFYKSKLSVPLSLRSSPPNAKLS N AAKQSSICYNPLRFAVGSE     GINKKKSRGLSAVCYAMPVNTRTLQWISTISSVVL
Subjt:  MVCVSLSSAISLYTPSFYKSKLSVPLSLRSSPPNAKLSFNPAAKQSSICYNPLRFAVGSEGIATAGINKKKSRGLSAVCYAMPVNTRTLQWISTISSVVL

Query:  MLARGTGIQKSFIVPLFALQAPASVISWIKGEYGIWSAFLALLVRLFFFIPGELEIPFISLLLVIVAPYQVQNLRGTQEGCIISLLIAAYLAFQHFSRAG
        MLA+GTGIQKSFIVPLFALQAPASVISWIKGEYGIWSAFLALLVRLFFFIPGELEIPFISLLLVIVAPYQVQNLRGTQEGCIISLLIAAYLAFQHFSRAG
Subjt:  MLARGTGIQKSFIVPLFALQAPASVISWIKGEYGIWSAFLALLVRLFFFIPGELEIPFISLLLVIVAPYQVQNLRGTQEGCIISLLIAAYLAFQHFSRAG

Query:  SFQRAFDQNSIVATVAVVCITAVSFLFVI
        SFQRAFDQNSIVATVAVVCITAVSFLFVI
Subjt:  SFQRAFDQNSIVATVAVVCITAVSFLFVI

XP_008443932.1 PREDICTED: cold-regulated 413 inner membrane protein 2, chloroplastic-like [Cucumis melo]9.4e-11396.07Show/hide
Query:  MVCVSLSSAISLYTPSFYKSKLSVPLSLRSSPPNAKLSFNPAAKQSSICYNPLRFAVGSEGIATAGINKKKSRGLSAVCYAMPVNTRTLQWISTISSVVL
        MVCVSLSSA+SLY PSFYKSKLSVPLSLRSSPPNAKLS N AAKQSSICYNPLRFAVGSEGIATAGINKKK+RGLSA CYAMPVNTRTLQW+STISSVVL
Subjt:  MVCVSLSSAISLYTPSFYKSKLSVPLSLRSSPPNAKLSFNPAAKQSSICYNPLRFAVGSEGIATAGINKKKSRGLSAVCYAMPVNTRTLQWISTISSVVL

Query:  MLARGTGIQKSFIVPLFALQAPASVISWIKGEYGIWSAFLALLVRLFFFIPGELEIPFISLLLVIVAPYQVQNLRGTQEGCIISLLIAAYLAFQHFSRAG
        MLA+GTGIQKSFIVPLFALQAPASVISWIKGEYGIWSAFLALLVRLFFFIPGELEIPFISLLLVIVAPYQVQNLRGTQEGCIISLLIAAYLAFQHFSRAG
Subjt:  MLARGTGIQKSFIVPLFALQAPASVISWIKGEYGIWSAFLALLVRLFFFIPGELEIPFISLLLVIVAPYQVQNLRGTQEGCIISLLIAAYLAFQHFSRAG

Query:  SFQRAFDQNSIVATVAVVCITAVSFLFVI
        SFQRAFDQNSIVATVAV+CITAVSFLFVI
Subjt:  SFQRAFDQNSIVATVAVVCITAVSFLFVI

XP_022140053.1 cold-regulated 413 inner membrane protein 1, chloroplastic-like [Momordica charantia]1.3e-9885.59Show/hide
Query:  MVCVSLSSAISLYTPSFYKSKLSVPLSLRSSPPNAKLSFNPAAKQSSICYNPLRFAVGSEGIATAGINKKKSRGLSAVCYAMPVNTRTLQWISTISSVVL
        MVC+SLSSA SL+T S YK+KLS PLSLRS P +AKLS NPA K+SSICYNPLRFAVG+EGIATA INK++SRGL+ VCYAMP+  R +QWISTIS VVL
Subjt:  MVCVSLSSAISLYTPSFYKSKLSVPLSLRSSPPNAKLSFNPAAKQSSICYNPLRFAVGSEGIATAGINKKKSRGLSAVCYAMPVNTRTLQWISTISSVVL

Query:  MLARGTGIQKSFIVPLFALQAPASVISWIKGEYGIWSAFLALLVRLFFFIPGELEIPFISLLLVIVAPYQVQNLRGTQEGCIISLLIAAYLAFQHFSRAG
        MLARGTGIQKSFIVPLFALQAPASVISWIKGEYGIW+AFLALLVRLFFFIPGELEIPFISLLLVIVAPYQVQNLRGTQEG IISLLIAA+LAFQHFSRAG
Subjt:  MLARGTGIQKSFIVPLFALQAPASVISWIKGEYGIWSAFLALLVRLFFFIPGELEIPFISLLLVIVAPYQVQNLRGTQEGCIISLLIAAYLAFQHFSRAG

Query:  SFQRAFDQNSIVATVAVVCITAVSFLFVI
        SF+RAFDQNSIVAT AVVC+TA SFL VI
Subjt:  SFQRAFDQNSIVATVAVVCITAVSFLFVI

XP_022994881.1 cold-regulated 413 inner membrane protein 1, chloroplastic-like isoform X2 [Cucurbita maxima]5.0e-9886.03Show/hide
Query:  MVCVSLSSAISLYTPSFYKSKLSVPLSLRSSPPNAKLSFNPAAKQSSICYNPLRFAVGSEGIATAGINKKKSRGLSAVCYAMPVNTRTLQWISTISSVVL
        MVCV LSSAISL++P  +KSKLS PLSLRSS PNAKL+FNPAAKQSSIC NP+RF  GS+  +T  INKK+ RGLSAVCYAMP++ R LQWISTISSV+L
Subjt:  MVCVSLSSAISLYTPSFYKSKLSVPLSLRSSPPNAKLSFNPAAKQSSICYNPLRFAVGSEGIATAGINKKKSRGLSAVCYAMPVNTRTLQWISTISSVVL

Query:  MLARGTGIQKSFIVPLFALQAPASVISWIKGEYGIWSAFLALLVRLFFFIPGELEIPFISLLLVIVAPYQVQNLRGTQEGCIISLLIAAYLAFQHFSRAG
        MLARGTGIQKSFIVPLFALQAPASVISWIKGEYGIWSAFLALLVRLFFFIPGELEIPFISLLLVIVAPYQVQNLRGTQEG IISLLIAAYLAFQHFSRAG
Subjt:  MLARGTGIQKSFIVPLFALQAPASVISWIKGEYGIWSAFLALLVRLFFFIPGELEIPFISLLLVIVAPYQVQNLRGTQEGCIISLLIAAYLAFQHFSRAG

Query:  SFQRAFDQNSIVATVAVVCITAVSFLFVI
        SF+RAFDQNSIVATVA++C+TAVSFL VI
Subjt:  SFQRAFDQNSIVATVAVVCITAVSFLFVI

XP_038896035.1 cold-regulated 413 inner membrane protein 1, chloroplastic-like [Benincasa hispida]3.8e-10690.83Show/hide
Query:  MVCVSLSSAISLYTPSFYKSKLSVPLSLRSSPPNAKLSFNPAAKQSSICYNPLRFAVGSEGIATAGINKKKSRGLSAVCYAMPVNTRTLQWISTISSVVL
        MVCVSLSSA+SLY PS Y+SKLSVPLSLRSSPPNAKLSF+PAAKQSSICYNPLRFAVGSEGIATA I KK+SRGLSA+CYAMPVN RTLQWISTISS VL
Subjt:  MVCVSLSSAISLYTPSFYKSKLSVPLSLRSSPPNAKLSFNPAAKQSSICYNPLRFAVGSEGIATAGINKKKSRGLSAVCYAMPVNTRTLQWISTISSVVL

Query:  MLARGTGIQKSFIVPLFALQAPASVISWIKGEYGIWSAFLALLVRLFFFIPGELEIPFISLLLVIVAPYQVQNLRGTQEGCIISLLIAAYLAFQHFSRAG
        MLA+GTGIQKSFIVPLFAL APASV+SWIKGEYGIWSAFLALLVRLFFFIPGELEIPFISLLLVIVAPYQVQ+LRGTQEG IISL+IAAYLAFQHFSRAG
Subjt:  MLARGTGIQKSFIVPLFALQAPASVISWIKGEYGIWSAFLALLVRLFFFIPGELEIPFISLLLVIVAPYQVQNLRGTQEGCIISLLIAAYLAFQHFSRAG

Query:  SFQRAFDQNSIVATVAVVCITAVSFLFVI
        SF+RAFDQNSIVATVAV+C TAVSFL VI
Subjt:  SFQRAFDQNSIVATVAVVCITAVSFLFVI

TrEMBL top hitse value%identityAlignment
A0A0A0LXM7 Uncharacterized protein1.1e-10995.63Show/hide
Query:  MVCVSLSSAISLYTPSFYKSKLSVPLSLRSSPPNAKLSFNPAAKQSSICYNPLRFAVGSEGIATAGINKKKSRGLSAVCYAMPVNTRTLQWISTISSVVL
        MVCVSLSSA+SLY PSFYKSKLSVPLSLRSSPPNAKLS N AAKQSSICYNPLRFAVGSE     GINKKKSRGLSAVCYAMPVNTRTLQWISTISSVVL
Subjt:  MVCVSLSSAISLYTPSFYKSKLSVPLSLRSSPPNAKLSFNPAAKQSSICYNPLRFAVGSEGIATAGINKKKSRGLSAVCYAMPVNTRTLQWISTISSVVL

Query:  MLARGTGIQKSFIVPLFALQAPASVISWIKGEYGIWSAFLALLVRLFFFIPGELEIPFISLLLVIVAPYQVQNLRGTQEGCIISLLIAAYLAFQHFSRAG
        MLA+GTGIQKSFIVPLFALQAPASVISWIKGEYGIWSAFLALLVRLFFFIPGELEIPFISLLLVIVAPYQVQNLRGTQEGCIISLLIAAYLAFQHFSRAG
Subjt:  MLARGTGIQKSFIVPLFALQAPASVISWIKGEYGIWSAFLALLVRLFFFIPGELEIPFISLLLVIVAPYQVQNLRGTQEGCIISLLIAAYLAFQHFSRAG

Query:  SFQRAFDQNSIVATVAVVCITAVSFLFVI
        SFQRAFDQNSIVATVAVVCITAVSFLFVI
Subjt:  SFQRAFDQNSIVATVAVVCITAVSFLFVI

A0A1S3B961 cold-regulated 413 inner membrane protein 2, chloroplastic-like4.6e-11396.07Show/hide
Query:  MVCVSLSSAISLYTPSFYKSKLSVPLSLRSSPPNAKLSFNPAAKQSSICYNPLRFAVGSEGIATAGINKKKSRGLSAVCYAMPVNTRTLQWISTISSVVL
        MVCVSLSSA+SLY PSFYKSKLSVPLSLRSSPPNAKLS N AAKQSSICYNPLRFAVGSEGIATAGINKKK+RGLSA CYAMPVNTRTLQW+STISSVVL
Subjt:  MVCVSLSSAISLYTPSFYKSKLSVPLSLRSSPPNAKLSFNPAAKQSSICYNPLRFAVGSEGIATAGINKKKSRGLSAVCYAMPVNTRTLQWISTISSVVL

Query:  MLARGTGIQKSFIVPLFALQAPASVISWIKGEYGIWSAFLALLVRLFFFIPGELEIPFISLLLVIVAPYQVQNLRGTQEGCIISLLIAAYLAFQHFSRAG
        MLA+GTGIQKSFIVPLFALQAPASVISWIKGEYGIWSAFLALLVRLFFFIPGELEIPFISLLLVIVAPYQVQNLRGTQEGCIISLLIAAYLAFQHFSRAG
Subjt:  MLARGTGIQKSFIVPLFALQAPASVISWIKGEYGIWSAFLALLVRLFFFIPGELEIPFISLLLVIVAPYQVQNLRGTQEGCIISLLIAAYLAFQHFSRAG

Query:  SFQRAFDQNSIVATVAVVCITAVSFLFVI
        SFQRAFDQNSIVATVAV+CITAVSFLFVI
Subjt:  SFQRAFDQNSIVATVAVVCITAVSFLFVI

A0A5D3DB21 Cold-regulated 413 inner membrane protein 24.6e-11396.07Show/hide
Query:  MVCVSLSSAISLYTPSFYKSKLSVPLSLRSSPPNAKLSFNPAAKQSSICYNPLRFAVGSEGIATAGINKKKSRGLSAVCYAMPVNTRTLQWISTISSVVL
        MVCVSLSSA+SLY PSFYKSKLSVPLSLRSSPPNAKLS N AAKQSSICYNPLRFAVGSEGIATAGINKKK+RGLSA CYAMPVNTRTLQW+STISSVVL
Subjt:  MVCVSLSSAISLYTPSFYKSKLSVPLSLRSSPPNAKLSFNPAAKQSSICYNPLRFAVGSEGIATAGINKKKSRGLSAVCYAMPVNTRTLQWISTISSVVL

Query:  MLARGTGIQKSFIVPLFALQAPASVISWIKGEYGIWSAFLALLVRLFFFIPGELEIPFISLLLVIVAPYQVQNLRGTQEGCIISLLIAAYLAFQHFSRAG
        MLA+GTGIQKSFIVPLFALQAPASVISWIKGEYGIWSAFLALLVRLFFFIPGELEIPFISLLLVIVAPYQVQNLRGTQEGCIISLLIAAYLAFQHFSRAG
Subjt:  MLARGTGIQKSFIVPLFALQAPASVISWIKGEYGIWSAFLALLVRLFFFIPGELEIPFISLLLVIVAPYQVQNLRGTQEGCIISLLIAAYLAFQHFSRAG

Query:  SFQRAFDQNSIVATVAVVCITAVSFLFVI
        SFQRAFDQNSIVATVAV+CITAVSFLFVI
Subjt:  SFQRAFDQNSIVATVAVVCITAVSFLFVI

A0A6J1CH44 cold-regulated 413 inner membrane protein 1, chloroplastic-like6.4e-9985.59Show/hide
Query:  MVCVSLSSAISLYTPSFYKSKLSVPLSLRSSPPNAKLSFNPAAKQSSICYNPLRFAVGSEGIATAGINKKKSRGLSAVCYAMPVNTRTLQWISTISSVVL
        MVC+SLSSA SL+T S YK+KLS PLSLRS P +AKLS NPA K+SSICYNPLRFAVG+EGIATA INK++SRGL+ VCYAMP+  R +QWISTIS VVL
Subjt:  MVCVSLSSAISLYTPSFYKSKLSVPLSLRSSPPNAKLSFNPAAKQSSICYNPLRFAVGSEGIATAGINKKKSRGLSAVCYAMPVNTRTLQWISTISSVVL

Query:  MLARGTGIQKSFIVPLFALQAPASVISWIKGEYGIWSAFLALLVRLFFFIPGELEIPFISLLLVIVAPYQVQNLRGTQEGCIISLLIAAYLAFQHFSRAG
        MLARGTGIQKSFIVPLFALQAPASVISWIKGEYGIW+AFLALLVRLFFFIPGELEIPFISLLLVIVAPYQVQNLRGTQEG IISLLIAA+LAFQHFSRAG
Subjt:  MLARGTGIQKSFIVPLFALQAPASVISWIKGEYGIWSAFLALLVRLFFFIPGELEIPFISLLLVIVAPYQVQNLRGTQEGCIISLLIAAYLAFQHFSRAG

Query:  SFQRAFDQNSIVATVAVVCITAVSFLFVI
        SF+RAFDQNSIVAT AVVC+TA SFL VI
Subjt:  SFQRAFDQNSIVATVAVVCITAVSFLFVI

A0A6J1K0I6 cold-regulated 413 inner membrane protein 1, chloroplastic-like isoform X22.4e-9886.03Show/hide
Query:  MVCVSLSSAISLYTPSFYKSKLSVPLSLRSSPPNAKLSFNPAAKQSSICYNPLRFAVGSEGIATAGINKKKSRGLSAVCYAMPVNTRTLQWISTISSVVL
        MVCV LSSAISL++P  +KSKLS PLSLRSS PNAKL+FNPAAKQSSIC NP+RF  GS+  +T  INKK+ RGLSAVCYAMP++ R LQWISTISSV+L
Subjt:  MVCVSLSSAISLYTPSFYKSKLSVPLSLRSSPPNAKLSFNPAAKQSSICYNPLRFAVGSEGIATAGINKKKSRGLSAVCYAMPVNTRTLQWISTISSVVL

Query:  MLARGTGIQKSFIVPLFALQAPASVISWIKGEYGIWSAFLALLVRLFFFIPGELEIPFISLLLVIVAPYQVQNLRGTQEGCIISLLIAAYLAFQHFSRAG
        MLARGTGIQKSFIVPLFALQAPASVISWIKGEYGIWSAFLALLVRLFFFIPGELEIPFISLLLVIVAPYQVQNLRGTQEG IISLLIAAYLAFQHFSRAG
Subjt:  MLARGTGIQKSFIVPLFALQAPASVISWIKGEYGIWSAFLALLVRLFFFIPGELEIPFISLLLVIVAPYQVQNLRGTQEGCIISLLIAAYLAFQHFSRAG

Query:  SFQRAFDQNSIVATVAVVCITAVSFLFVI
        SF+RAFDQNSIVATVA++C+TAVSFL VI
Subjt:  SFQRAFDQNSIVATVAVVCITAVSFLFVI

SwissProt top hitse value%identityAlignment
F4I1G5 Cold-regulated 413 inner membrane protein 2, chloroplastic2.3e-6157.14Show/hide
Query:  VCVSLSSAISLYTPSFYKSKLSVPLSLRSSPPNAKLSFNPAAKQSSICYNPLRFAVGSEGIAT--AGINKKKSRGLSAVCYAMP-VNTRTLQWISTISSV
        +C+S S  +SL     +  K  + L LR  P N           S +C+NPLR +   +  AT  A   K++ RG S VCYA P ++   LQWISTIS V
Subjt:  VCVSLSSAISLYTPSFYKSKLSVPLSLRSSPPNAKLSFNPAAKQSSICYNPLRFAVGSEGIAT--AGINKKKSRGLSAVCYAMP-VNTRTLQWISTISSV

Query:  VLMLARGTGIQKSFIVPLFALQAPASVISWIKGEYGIWSAFLALLVRLFFFIPGELEIPFISLLLVIVAPYQVQNLRGTQEGCIISLLIAAYLAFQHFSR
         LM ARGTGI KSF+VPLFALQAP  ++SW+KGEYGIW+AFLALL RLFF  P ELE+PFI+LLLVIVAPYQV ++RG QEG I+SL I+ +LAFQHFSR
Subjt:  VLMLARGTGIQKSFIVPLFALQAPASVISWIKGEYGIWSAFLALLVRLFFFIPGELEIPFISLLLVIVAPYQVQNLRGTQEGCIISLLIAAYLAFQHFSR

Query:  AGSFQRAFDQNSIVATVAVVCITAVSFLFVI
        AG+ Q+AFDQNS++ATVA++ +T VSFLF+I
Subjt:  AGSFQRAFDQNSIVATVAVVCITAVSFLFVI

O23164 Cold-regulated 413 plasma membrane protein 41.2e-1232.87Show/hide
Query:  TRTLQWISTISSVVLMLARGTG----IQKSFIVPLFALQAPASVISWIKGEYGIWSAFLALLVRLFF--FIPGELEIPFISLLLVIVAPYQVQ-NLRGTQ
        T  LQW ++I ++ L++   T     +  + +VP      P+ +  +  G++G W A +A++VRLFF    P  LEIP   +L+V+V+P  +   LR + 
Subjt:  TRTLQWISTISSVVLMLARGTG----IQKSFIVPLFALQAPASVISWIKGEYGIWSAFLALLVRLFF--FIPGELEIPFISLLLVIVAPYQVQ-NLRGTQ

Query:  EGCIISLLIAAYLAFQHFSRAGSFQRAFDQ-NSIVATVAVVCI
         G +I L+IA YL  +H   +G F+ +F Q N I  T+ +V +
Subjt:  EGCIISLLIAAYLAFQHFSRAGSFQRAFDQ-NSIVATVAVVCI

Q94AL8 Cold-regulated 413 inner membrane protein 1, chloroplastic7.4e-6053.04Show/hide
Query:  VCVSLSSAISLYTPSFYKSKLSVPLSLRSSPPNAKLSFNPAAKQSSICYNPLRFAVGSEGIATAG--INKKKSRGLSAVCYAMPVNTRTLQWISTISSVV
        +C+S S  +SL     +  K  + L LRS P +           S +C+NPLR +   +  AT    + K++ RG S VCYA P++  +LQWISTIS + 
Subjt:  VCVSLSSAISLYTPSFYKSKLSVPLSLRSSPPNAKLSFNPAAKQSSICYNPLRFAVGSEGIATAG--INKKKSRGLSAVCYAMPVNTRTLQWISTISSVV

Query:  LMLARGTGIQKSFIVPLFALQAPASVISWIKGEYGIWSAFLALLVRLFFFIPGELEIPFISLLLVIVAPYQVQNLRGTQEGCIISLLIAAYLAFQHFSRA
        LMLARGTGI KS +VPLFAL AP+S+++WIKGEYG+W+AFLAL+ RLFF  PGELE+PFI+LLLVIVAPYQV N+RG QEG II++ I+ +LAFQHFSRA
Subjt:  LMLARGTGIQKSFIVPLFALQAPASVISWIKGEYGIWSAFLALLVRLFFFIPGELEIPFISLLLVIVAPYQVQNLRGTQEGCIISLLIAAYLAFQHFSRA

Query:  GSFQRAFDQNSIVATVAVVCITAVSFLFVI
        GS ++A+++ S++ATVA++ +T VS L ++
Subjt:  GSFQRAFDQNSIVATVAVVCITAVSFLFVI

Q9SVL6 Cold-regulated 413 plasma membrane protein 21.3e-1131.5Show/hide
Query:  LQWISTISSVVLMLARGTG----IQKSFIVPLFALQAPASVISWIKGEYGIWSAFLALLVRLFF--FIPGELEIPFISLLLVIVAP-YQVQNLRGTQEGC
        L+++++ +++ L++   T     +  S ++P   L  P+ + +++ G+ G W AF+A+++RLFF    P  LE+P   +LL++V+P +   ++RGT  G 
Subjt:  LQWISTISSVVLMLARGTG----IQKSFIVPLFALQAPASVISWIKGEYGIWSAFLALLVRLFF--FIPGELEIPFISLLLVIVAP-YQVQNLRGTQEGC

Query:  IISLLIAAYLAFQHFSRAGSFQRAFDQ
        +ISL I  YL  +H   +G F+ +F Q
Subjt:  IISLLIAAYLAFQHFSRAGSFQRAFDQ

Q9XIM7 Cold-regulated 413 plasma membrane protein 11.8e-1031.47Show/hide
Query:  TRTLQWISTISSVVLMLAR----GTGIQKSFIVPLFALQAPASVISWIKGEYGIWSAFLALLVRLFF--FIPGELEIPFISLLLVIVAPYQVQ-NLRGTQ
        T  L+W+++I+++ L++       T +  S ++P      P+ +    +GE G W AF+A++V+LFF       LE+P   +LL +VAP  +    R + 
Subjt:  TRTLQWISTISSVVLMLAR----GTGIQKSFIVPLFALQAPASVISWIKGEYGIWSAFLALLVRLFF--FIPGELEIPFISLLLVIVAPYQVQ-NLRGTQ

Query:  EGCIISLLIAAYLAFQHFSRAGSFQRAFDQ-NSIVATVAVVCI
         G  I L I  YL  +H   +G F+ AF + N I  TV ++C+
Subjt:  EGCIISLLIAAYLAFQHFSRAGSFQRAFDQ-NSIVATVAVVCI

Arabidopsis top hitse value%identityAlignment
AT1G29390.1 cold regulated 314 thylakoid membrane 21.6e-6257.14Show/hide
Query:  VCVSLSSAISLYTPSFYKSKLSVPLSLRSSPPNAKLSFNPAAKQSSICYNPLRFAVGSEGIAT--AGINKKKSRGLSAVCYAMP-VNTRTLQWISTISSV
        +C+S S  +SL     +  K  + L LR  P N           S +C+NPLR +   +  AT  A   K++ RG S VCYA P ++   LQWISTIS V
Subjt:  VCVSLSSAISLYTPSFYKSKLSVPLSLRSSPPNAKLSFNPAAKQSSICYNPLRFAVGSEGIAT--AGINKKKSRGLSAVCYAMP-VNTRTLQWISTISSV

Query:  VLMLARGTGIQKSFIVPLFALQAPASVISWIKGEYGIWSAFLALLVRLFFFIPGELEIPFISLLLVIVAPYQVQNLRGTQEGCIISLLIAAYLAFQHFSR
         LM ARGTGI KSF+VPLFALQAP  ++SW+KGEYGIW+AFLALL RLFF  P ELE+PFI+LLLVIVAPYQV ++RG QEG I+SL I+ +LAFQHFSR
Subjt:  VLMLARGTGIQKSFIVPLFALQAPASVISWIKGEYGIWSAFLALLVRLFFFIPGELEIPFISLLLVIVAPYQVQNLRGTQEGCIISLLIAAYLAFQHFSR

Query:  AGSFQRAFDQNSIVATVAVVCITAVSFLFVI
        AG+ Q+AFDQNS++ATVA++ +T VSFLF+I
Subjt:  AGSFQRAFDQNSIVATVAVVCITAVSFLFVI

AT1G29390.2 cold regulated 314 thylakoid membrane 21.4e-5867.66Show/hide
Query:  TAGINKKKSRGLSAVCYAMP-VNTRTLQWISTISSVVLMLARGTGIQKSFIVPLFALQAPASVISWIKGEYGIWSAFLALLVRLFFFIPGELEIPFISLL
        +A   K++ RG S VCYA P ++   LQWISTIS V LM ARGTGI KSF+VPLFALQAP  ++SW+KGEYGIW+AFLALL RLFF  P ELE+PFI+LL
Subjt:  TAGINKKKSRGLSAVCYAMP-VNTRTLQWISTISSVVLMLARGTGIQKSFIVPLFALQAPASVISWIKGEYGIWSAFLALLVRLFFFIPGELEIPFISLL

Query:  LVIVAPYQVQNLRGTQEGCIISLLIAAYLAFQHFSRAGSFQRAFDQNSIVATVAVVCITAVSFLFVI
        LVIVAPYQV ++RG QEG I+SL I+ +LAFQHFSRAG+ Q+AFDQNS++ATVA++ +T VSFLF+I
Subjt:  LVIVAPYQVQNLRGTQEGCIISLLIAAYLAFQHFSRAGSFQRAFDQNSIVATVAVVCITAVSFLFVI

AT1G29395.1 COLD REGULATED 314 INNER MEMBRANE 15.2e-6153.04Show/hide
Query:  VCVSLSSAISLYTPSFYKSKLSVPLSLRSSPPNAKLSFNPAAKQSSICYNPLRFAVGSEGIATAG--INKKKSRGLSAVCYAMPVNTRTLQWISTISSVV
        +C+S S  +SL     +  K  + L LRS P +           S +C+NPLR +   +  AT    + K++ RG S VCYA P++  +LQWISTIS + 
Subjt:  VCVSLSSAISLYTPSFYKSKLSVPLSLRSSPPNAKLSFNPAAKQSSICYNPLRFAVGSEGIATAG--INKKKSRGLSAVCYAMPVNTRTLQWISTISSVV

Query:  LMLARGTGIQKSFIVPLFALQAPASVISWIKGEYGIWSAFLALLVRLFFFIPGELEIPFISLLLVIVAPYQVQNLRGTQEGCIISLLIAAYLAFQHFSRA
        LMLARGTGI KS +VPLFAL AP+S+++WIKGEYG+W+AFLAL+ RLFF  PGELE+PFI+LLLVIVAPYQV N+RG QEG II++ I+ +LAFQHFSRA
Subjt:  LMLARGTGIQKSFIVPLFALQAPASVISWIKGEYGIWSAFLALLVRLFFFIPGELEIPFISLLLVIVAPYQVQNLRGTQEGCIISLLIAAYLAFQHFSRA

Query:  GSFQRAFDQNSIVATVAVVCITAVSFLFVI
        GS ++A+++ S++ATVA++ +T VS L ++
Subjt:  GSFQRAFDQNSIVATVAVVCITAVSFLFVI

AT3G50830.1 cold-regulated 413-plasma membrane 29.1e-1331.5Show/hide
Query:  LQWISTISSVVLMLARGTG----IQKSFIVPLFALQAPASVISWIKGEYGIWSAFLALLVRLFF--FIPGELEIPFISLLLVIVAP-YQVQNLRGTQEGC
        L+++++ +++ L++   T     +  S ++P   L  P+ + +++ G+ G W AF+A+++RLFF    P  LE+P   +LL++V+P +   ++RGT  G 
Subjt:  LQWISTISSVVLMLARGTG----IQKSFIVPLFALQAPASVISWIKGEYGIWSAFLALLVRLFF--FIPGELEIPFISLLLVIVAP-YQVQNLRGTQEGC

Query:  IISLLIAAYLAFQHFSRAGSFQRAFDQ
        +ISL I  YL  +H   +G F+ +F Q
Subjt:  IISLLIAAYLAFQHFSRAGSFQRAFDQ

AT4G37220.1 Cold acclimation protein WCOR413 family8.2e-1432.87Show/hide
Query:  TRTLQWISTISSVVLMLARGTG----IQKSFIVPLFALQAPASVISWIKGEYGIWSAFLALLVRLFF--FIPGELEIPFISLLLVIVAPYQVQ-NLRGTQ
        T  LQW ++I ++ L++   T     +  + +VP      P+ +  +  G++G W A +A++VRLFF    P  LEIP   +L+V+V+P  +   LR + 
Subjt:  TRTLQWISTISSVVLMLARGTG----IQKSFIVPLFALQAPASVISWIKGEYGIWSAFLALLVRLFF--FIPGELEIPFISLLLVIVAPYQVQ-NLRGTQ

Query:  EGCIISLLIAAYLAFQHFSRAGSFQRAFDQ-NSIVATVAVVCI
         G +I L+IA YL  +H   +G F+ +F Q N I  T+ +V +
Subjt:  EGCIISLLIAAYLAFQHFSRAGSFQRAFDQ-NSIVATVAVVCI


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTTTGTGTATCTCTATCTTCTGCTATTTCACTTTACACTCCTTCTTTCTACAAATCCAAACTCTCCGTTCCTCTCTCCCTAAGATCTTCACCGCCGAATGCAAAGCT
CTCGTTCAATCCTGCCGCTAAACAGAGTTCAATCTGTTACAATCCGCTCAGGTTTGCTGTCGGTAGCGAGGGGATTGCGACGGCGGGGATTAACAAGAAGAAGAGTCGTG
GTTTAAGTGCTGTTTGTTACGCTATGCCTGTTAACACTCGCACTCTTCAGTGGATCTCCACCATTTCTTCTGTGGTTTTAATGCTCGCAAGGGGAACTGGGATTCAGAAG
TCATTTATCGTTCCGCTATTTGCACTTCAGGCGCCTGCAAGTGTTATCTCCTGGATTAAAGGAGAGTACGGCATTTGGAGCGCTTTTCTGGCACTTCTCGTTCGACTGTT
CTTCTTCATCCCTGGTGAATTGGAGATACCATTCATATCACTACTTTTGGTGATTGTGGCCCCATATCAAGTCCAAAACTTAAGGGGAACCCAAGAAGGGTGCATTATCT
CCCTACTGATTGCAGCATATTTGGCCTTCCAGCATTTCTCTCGAGCAGGCAGCTTTCAGAGAGCTTTTGATCAGAACTCAATTGTTGCAACAGTAGCAGTCGTTTGTATT
ACCGCTGTCTCATTCCTGTTCGTGATCTGA
mRNA sequenceShow/hide mRNA sequence
TGCTATTCCAAGTTGGCTTAACCTTATCAGAACTTAAACAAATTTTGTTATCATTAACGAATGAGGTTTAGGATTTGTTGATTCCATTTGATCTTCATCTCTACTATCTA
CGTAGACCTCCTTTTCATCAATTACAACTCACTTTATCGGGCTTAAAGGACGCCCTCCATGAATTGATTGTGTTTTTTGATTCGTTATTTCTTGAAGTTTCTTTTAAAAG
ATTTAATTTTGACAAGTTATTTTGTGATTTATTTTTCATACTTTACTAAAAAAAATGTGGCGGTTTGATGAACACTTTCTTATCGGTTTTGGGGAGGGCAGCCGGTTCCG
GTTTTGGTTTTGTTCAAGTTCATCAGCTGTACAGGCGACAGTTTGCTTGTTGAATCAAAACTAGAGAATCAAGATCATCGTTTCAATTTCCATTCCAAATCCGAGAGAAG
ATAAAGGCTGAATCCAGCAAAGGAAGAAAGGGGAAATGGTTTGTGTATCTCTATCTTCTGCTATTTCACTTTACACTCCTTCTTTCTACAAATCCAAACTCTCCGTTCCT
CTCTCCCTAAGATCTTCACCGCCGAATGCAAAGCTCTCGTTCAATCCTGCCGCTAAACAGAGTTCAATCTGTTACAATCCGCTCAGGTTTGCTGTCGGTAGCGAGGGGAT
TGCGACGGCGGGGATTAACAAGAAGAAGAGTCGTGGTTTAAGTGCTGTTTGTTACGCTATGCCTGTTAACACTCGCACTCTTCAGTGGATCTCCACCATTTCTTCTGTGG
TTTTAATGCTCGCAAGGGGAACTGGGATTCAGAAGTCATTTATCGTTCCGCTATTTGCACTTCAGGCGCCTGCAAGTGTTATCTCCTGGATTAAAGGAGAGTACGGCATT
TGGAGCGCTTTTCTGGCACTTCTCGTTCGACTGTTCTTCTTCATCCCTGGTGAATTGGAGATACCATTCATATCACTACTTTTGGTGATTGTGGCCCCATATCAAGTCCA
AAACTTAAGGGGAACCCAAGAAGGGTGCATTATCTCCCTACTGATTGCAGCATATTTGGCCTTCCAGCATTTCTCTCGAGCAGGCAGCTTTCAGAGAGCTTTTGATCAGA
ACTCAATTGTTGCAACAGTAGCAGTCGTTTGTATTACCGCTGTCTCATTCCTGTTCGTGATCTGAGTCCCTTAGTCACTCCCAAGTAAACCTTACCGGTTAAATCTTCAA
TAAACAATATTGGTCGTCCTGTAATAGTTACACAATAGTCAGAATGTACAGACCTTCCTTTTCATGTTTATAGATACTATAAAGAAATGTTTATTTCTTCTTGCTTGTTT
GGTCTAATCATCATCTTGTGTCTCTTTTTAGTTATCACAAAATTGAATTAGATTGAACCTAGACAATTACTTGTTTCCTTTTCAAATAACATCAGCACTAACTAGTTATA
TATGGCAGTTCGTGAACTTGCTTTCTATCATCTGCTATTTGTTGTATAATTTGTACATTGTACAGCGAACAATCTTAAATTGGACAAAGTTGTCATTAATAGGTAAAACT
AAATGAACTCGTGCAAGCCGAAGTTCCAGTACAATGTCTCTTCCCTGGAAAACCAAC
Protein sequenceShow/hide protein sequence
MVCVSLSSAISLYTPSFYKSKLSVPLSLRSSPPNAKLSFNPAAKQSSICYNPLRFAVGSEGIATAGINKKKSRGLSAVCYAMPVNTRTLQWISTISSVVLMLARGTGIQK
SFIVPLFALQAPASVISWIKGEYGIWSAFLALLVRLFFFIPGELEIPFISLLLVIVAPYQVQNLRGTQEGCIISLLIAAYLAFQHFSRAGSFQRAFDQNSIVATVAVVCI
TAVSFLFVI