CuGenDBv2

Gene ID	PI0000142
Organism	Cucumis metuliferus PI 482460 (Melon (PI 482460) v1)
Description	DNA-directed RNA polymerase III subunit RPC3
Genome location	chr06:7169735..7177666
RNA-Seq Expression	PI0000142
Synteny	PI0000142
Gene Ontology terms	GO:0006351 - transcription, DNA-templated (biological process) GO:0005666 - RNA polymerase III complex (cellular component) GO:0003697 - single-stranded DNA binding (molecular function) GO:0003899 - DNA-directed 5'-3' RNA polymerase activity (molecular function)
InterPro domains	IPR008806 - RNA polymerase III Rpc82, C -terminal IPR013197 - RNA polymerase III subunit RPC82-related, helix-turn-helix IPR036388 - Winged helix-like DNA-binding domain superfamily IPR039748 - DNA-directed RNA polymerase III subunit RPC3

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAA0033658.1 DNA-directed RNA polymerase III subunit RPC3 isoform X1 [Cucumis melo var. makuwa]

1.8e-241

90.61

Show/hide

Query:  MVMTQYGIKYAIHIMTAHFGNLVAKVCETLLRKGPLTLRLLIRFTELTPSQVNNSLLILIQHNCVQAFTDVTEGEFGDAPKDDTQYLALFSNILHRMRFS
        MVMTQYGIKYA+HIMTAHFGNLVAKVCETLLRKGPLTLRLLIRFTELTPSQVNNSLLILIQHNCVQAFTDVTEGEFGDAPKDDTQYLALFSNILHRMRFS
Subjt:  MVMTQYGIKYAIHIMTAHFGNLVAKVCETLLRKGPLTLRLLIRFTELTPSQVNNSLLILIQHNCVQAFTDVTEGEFGDAPKDDTQYLALFSNILHRMRFS

Query:  KFLAIASQKLGEDKDCQELLEGLLQNGRLSMEQMVERAEST------------------------------PEPTLSPKVEEQPPPRKKGAKAAKIAEVP
        KFLAIASQKLG+DK+CQELLEGLLQNGRLSMEQMVERAES+                              PEPTLSPKVEEQPPPRK+GAKAAKI EVP
Subjt:  KFLAIASQKLGEDKDCQELLEGLLQNGRLSMEQMVERAEST------------------------------PEPTLSPKVEEQPPPRKKGAKAAKIAEVP

Query:  ETLEQRLIEAARPVEVLRFSMGDTNPEAEKSEHYSQISGQKRKHDDLEIVQDSGDADGAILWRANYDEFIRCLRHKACIEHVRSQFDDGVVNVLSAILEA
        ETLEQRLIEAARPVEVLRFSMGDTNPEAEKSEHYSQISGQKRKHD+LEI QDSG ADGAILWRANYDEFIRCLRHKAC+EHVRSQFDDGVVNVLSA LEA
Subjt:  ETLEQRLIEAARPVEVLRFSMGDTNPEAEKSEHYSQISGQKRKHDDLEIVQDSGDADGAILWRANYDEFIRCLRHKACIEHVRSQFDDGVVNVLSAILEA

Query:  TRSSEKIVKTEITVPLSLDNIYEEVMKNEVGRSMTLDRVEASLAALGCPGMDDYKINLRRIIEQAQIDEVESIVLKRYGRDAYRMFRFLSKTGGLVETEK
        TRSSEKIVKTEITVPLSLDNIYEEVMKNEVGRSMTLDRVEASLAALGCPGMDDYKINLRRI+EQAQ DEVESIVLKRYGRDAYRMFRFLSKTGGLVETEK
Subjt:  TRSSEKIVKTEITVPLSLDNIYEEVMKNEVGRSMTLDRVEASLAALGCPGMDDYKINLRRIIEQAQIDEVESIVLKRYGRDAYRMFRFLSKTGGLVETEK

Query:  ISDSSFVDKNEAPKILYRLWKDEYLYMEKVALTVPRHSLCLLWRVDRYNLWEHVLDEMYHASLNLQLRLAHEIEENKEL
        ISDSSFVDKNEAPKILYRLWKDEYLYMEKVA+TVPRHSLCLLWRVDRYNLWEHVLDEMYHASLNLQLRLAHEIEENKE+
Subjt:  ISDSSFVDKNEAPKILYRLWKDEYLYMEKVALTVPRHSLCLLWRVDRYNLWEHVLDEMYHASLNLQLRLAHEIEENKEL

TYK22958.1 DNA-directed RNA polymerase III subunit RPC3 isoform X1 [Cucumis melo var. makuwa]

1.8e-241

90.61

Show/hide

Query:  MVMTQYGIKYAIHIMTAHFGNLVAKVCETLLRKGPLTLRLLIRFTELTPSQVNNSLLILIQHNCVQAFTDVTEGEFGDAPKDDTQYLALFSNILHRMRFS
        MVMTQYGIKYA+HIMTAHFGNLVAKVCETLLRKGPLTLRLLIRFTELTPSQVNNSLLILIQHNCVQAFTDVTEGEFGDAPKDDTQYLALFSNILHRMRFS
Subjt:  MVMTQYGIKYAIHIMTAHFGNLVAKVCETLLRKGPLTLRLLIRFTELTPSQVNNSLLILIQHNCVQAFTDVTEGEFGDAPKDDTQYLALFSNILHRMRFS

Query:  KFLAIASQKLGEDKDCQELLEGLLQNGRLSMEQMVERAEST------------------------------PEPTLSPKVEEQPPPRKKGAKAAKIAEVP
        KFLAIASQKLG+DK+CQELLEGLLQNGRLSMEQMVERAES+                              PEPTLSPKVEEQPPPRK+GAKAAKI EVP
Subjt:  KFLAIASQKLGEDKDCQELLEGLLQNGRLSMEQMVERAEST------------------------------PEPTLSPKVEEQPPPRKKGAKAAKIAEVP

Query:  ETLEQRLIEAARPVEVLRFSMGDTNPEAEKSEHYSQISGQKRKHDDLEIVQDSGDADGAILWRANYDEFIRCLRHKACIEHVRSQFDDGVVNVLSAILEA
        ETLEQRLIEAARPVEVLRFSMGDTNPEAEKSEHYSQISGQKRKHD+LEI QDSG ADGAILWRANYDEFIRCLRHKAC+EHVRSQFDDGVVNVLSA LEA
Subjt:  ETLEQRLIEAARPVEVLRFSMGDTNPEAEKSEHYSQISGQKRKHDDLEIVQDSGDADGAILWRANYDEFIRCLRHKACIEHVRSQFDDGVVNVLSAILEA

Query:  TRSSEKIVKTEITVPLSLDNIYEEVMKNEVGRSMTLDRVEASLAALGCPGMDDYKINLRRIIEQAQIDEVESIVLKRYGRDAYRMFRFLSKTGGLVETEK
        TRSSEKIVKTEITVPLSLDNIYEEVMKNEVGRSMTLDRVEASLAALGCPGMDDYKINLRRI+EQAQ DEVESIVLKRYGRDAYRMFRFLSKTGGLVETEK
Subjt:  TRSSEKIVKTEITVPLSLDNIYEEVMKNEVGRSMTLDRVEASLAALGCPGMDDYKINLRRIIEQAQIDEVESIVLKRYGRDAYRMFRFLSKTGGLVETEK

Query:  ISDSSFVDKNEAPKILYRLWKDEYLYMEKVALTVPRHSLCLLWRVDRYNLWEHVLDEMYHASLNLQLRLAHEIEENKEL
        ISDSSFVDKNEAPKILYRLWKDEYLYMEKVA+TVPRHSLCLLWRVDRYNLWEHVLDEMYHASLNLQLRLAHEIEENKE+
Subjt:  ISDSSFVDKNEAPKILYRLWKDEYLYMEKVALTVPRHSLCLLWRVDRYNLWEHVLDEMYHASLNLQLRLAHEIEENKEL

XP_008439232.1 PREDICTED: DNA-directed RNA polymerase III subunit RPC3 isoform X1 [Cucumis melo]

6.0e-266

Show/hide

Query:  MVMTQYGIKYAIHIMTAHFGNLVAKVCETLLRKGPLTLRLLIRFTELTPSQVNNSLLILIQHNCVQAFTDVTEGEFGDAPKDDTQYLALFSNILHRMRFS
        MVMTQYGIKYA+HIMTAHFGNLVAKVCETLLRKGPLTLRLLIRFTELTPSQVNNSLLILIQHNCVQAFTDVTEGEFGDAPKDDTQYLALFSNILHRMRFS
Subjt:  MVMTQYGIKYAIHIMTAHFGNLVAKVCETLLRKGPLTLRLLIRFTELTPSQVNNSLLILIQHNCVQAFTDVTEGEFGDAPKDDTQYLALFSNILHRMRFS

Query:  KFLAIASQKLGEDKDCQELLEGLLQNGRLSMEQMVERAEST------------------------------PEPTLSPKVEEQPPPRKKGAKAAKIAEVP
        KFLAIASQKLG+DK+CQELLEGLLQNGRLSMEQMVERAES+                              PEPTLSPKVEEQPPPRK+GAKAAKI EVP
Subjt:  KFLAIASQKLGEDKDCQELLEGLLQNGRLSMEQMVERAEST------------------------------PEPTLSPKVEEQPPPRKKGAKAAKIAEVP

Query:  ETLEQRLIEAARPVEVLRFSMGDTNPEAEKSEHYSQISGQKRKHDDLEIVQDSGDADGAILWRANYDEFIRCLRHKACIEHVRSQFDDGVVNVLSAILEA
        ETLEQRLIEAARPVEVLRFSMGDTNPEAEKSEHYSQISGQKRKHD+LEI QDSG ADGAILWRANYDEFIRCLRHKAC+EHVRSQFDDGVVNVLSA LEA
Subjt:  ETLEQRLIEAARPVEVLRFSMGDTNPEAEKSEHYSQISGQKRKHDDLEIVQDSGDADGAILWRANYDEFIRCLRHKACIEHVRSQFDDGVVNVLSAILEA

Query:  TRSSEKIVKTEITVPLSLDNIYEEVMKNEVGRSMTLDRVEASLAALGCPGMDDYKINLRRIIEQAQIDEVESIVLKRYGRDAYRMFRFLSKTGGLVETEK
        TRSSEKIVKTEITVPLSLDNIYEEVMKNEVGRSMTLDRVEASLAALGCPGMDDYKINLRRI+EQAQ DEVESIVLKRYGRDAYRMFRFLSKTGGLVETEK
Subjt:  TRSSEKIVKTEITVPLSLDNIYEEVMKNEVGRSMTLDRVEASLAALGCPGMDDYKINLRRIIEQAQIDEVESIVLKRYGRDAYRMFRFLSKTGGLVETEK

Query:  ISDSSFVDKNEAPKILYRLWKDEYLYMEKVALTVPRHSLCLLWRVDRYNLWEHVLDEMYHASLNLQLRLAHEIEENKELLSLPKDDNNKPLVKRMHHFEN
        ISDSSFVDKNEAPKILYRLWKDEYLYMEKVA+TVPRHSLCLLWRVDRYNLWEHVLDEMYHASLNLQLRLAHEIEENKELLSLPKD+NNKPLVK+MHHFE 
Subjt:  ISDSSFVDKNEAPKILYRLWKDEYLYMEKVALTVPRHSLCLLWRVDRYNLWEHVLDEMYHASLNLQLRLAHEIEENKELLSLPKDDNNKPLVKRMHHFEN

Query:  VRNLLRSSLVKLDDALMLFHDF
        VRNLLRSSLVKLDDALMLFHDF
Subjt:  VRNLLRSSLVKLDDALMLFHDF

XP_011651154.1 DNA-directed RNA polymerase III subunit RPC3 isoform X1 [Cucumis sativus]

1.1e-264

91.19

Show/hide

Query:  MVMTQYGIKYAIHIMTAHFGNLVAKVCETLLRKGPLTLRLLIRFTELTPSQVNNSLLILIQHNCVQAFTDVTEGEFGDAPKDDTQYLALFSNILHRMRFS
        MVMTQYGIKYA+HIMTAHFGNLVAKVCETLLRKGPLTLRLLIRFTELTPSQVNNSLLILIQHNCVQAFTDVTEGEFGDAPKDDT YLALFSNILHRMRFS
Subjt:  MVMTQYGIKYAIHIMTAHFGNLVAKVCETLLRKGPLTLRLLIRFTELTPSQVNNSLLILIQHNCVQAFTDVTEGEFGDAPKDDTQYLALFSNILHRMRFS

Query:  KFLAIASQKLGEDKDCQELLEGLLQNGRLSMEQMVERAEST------------------------------PEPTLSPKVEEQPPPRKKGAKAAKIAEVP
        KF+AIASQKLG+DK+CQELLEGLLQNGRLSMEQ+VERAES+                              PEPTLSPKVEE PPPRK+GAKAAKI+EVP
Subjt:  KFLAIASQKLGEDKDCQELLEGLLQNGRLSMEQMVERAEST------------------------------PEPTLSPKVEEQPPPRKKGAKAAKIAEVP

Query:  ETLEQRLIEAARPVEVLRFSMGDTNPEAEKSEHYSQISGQKRKHDDLEIVQDSGDADGAILWRANYDEFIRCLRHKACIEHVRSQFDDGVVNVLSAILEA
        ETLEQRLIEAARPVEVLRFSMGDTNPEAEKSEH+SQISGQKRKHDDLEI QDSGDADG ILWRANYDEFIRCLRHKACIEHVRSQFDDGVVNVLSAILEA
Subjt:  ETLEQRLIEAARPVEVLRFSMGDTNPEAEKSEHYSQISGQKRKHDDLEIVQDSGDADGAILWRANYDEFIRCLRHKACIEHVRSQFDDGVVNVLSAILEA

Query:  TRSSEKIVKTEITVPLSLDNIYEEVMKNEVGRSMTLDRVEASLAALGCPGMDDYKINLRRIIEQAQIDEVESIVLKRYGRDAYRMFRFLSKTGGLVETEK
        TRSSEKIVKTEITVPLSLDNIYEEVMKNEVGRSMTLDRVEASLAALGCPGMDDYKINLRRIIEQAQ DEVESIVLKRYGRDAYRMFRFLSKTGGLVETEK
Subjt:  TRSSEKIVKTEITVPLSLDNIYEEVMKNEVGRSMTLDRVEASLAALGCPGMDDYKINLRRIIEQAQIDEVESIVLKRYGRDAYRMFRFLSKTGGLVETEK

Query:  ISDSSFVDKNEAPKILYRLWKDEYLYMEKVALTVPRHSLCLLWRVDRYNLWEHVLDEMYHASLNLQLRLAHEIEENKELLSLPKDDNNKPLVKRMHHFEN
        ISDSSFVDKNEAPKILYRLWKDEYLYMEKVALTVPRHSLCLLWRVDRYNLWEHVLDEMYHASLNLQLRLAHEIEENKELLSLPKD+NNKPLVK+MHHFEN
Subjt:  ISDSSFVDKNEAPKILYRLWKDEYLYMEKVALTVPRHSLCLLWRVDRYNLWEHVLDEMYHASLNLQLRLAHEIEENKELLSLPKDDNNKPLVKRMHHFEN

Query:  VRNLLRSSLVKLDDALMLFHDF
        VRNLLRSSLVKLDDALMLFHDF
Subjt:  VRNLLRSSLVKLDDALMLFHDF

XP_038878061.1 DNA-directed RNA polymerase III subunit RPC3 isoform X1 [Benincasa hispida]

3.9e-249

85.25

Show/hide

Query:  MVMTQYGIKYAIHIMTAHFGNLVAKVCETLLRKGPLTLRLLIRFTELTPSQVNNSLLILIQHNCVQAFTDVTEGEFGDAPKDDTQYLALFSNILHRMRFS
        MVMTQYGIKYA+HI+TAHFGNLVAKVCETLLR+GPLTLRLLIRFTELT SQVNNSLLILIQHNCVQAFT VTEGEFGDAPK DTQYLALFSN+LHRMRFS
Subjt:  MVMTQYGIKYAIHIMTAHFGNLVAKVCETLLRKGPLTLRLLIRFTELTPSQVNNSLLILIQHNCVQAFTDVTEGEFGDAPKDDTQYLALFSNILHRMRFS

Query:  KFLAIASQKLGEDKDCQELLEGLLQNGRLSMEQMVERAEST------------------------------PEPTLSPKVEEQPPPRKKGAKAAKIAEVP
        KFLAIAS+KL +DKDC+ELLEGLLQNGRLSMEQMVERA+S+                              PEP+LSPKVEEQPPP+K+GAKAAKI+EVP
Subjt:  KFLAIASQKLGEDKDCQELLEGLLQNGRLSMEQMVERAEST------------------------------PEPTLSPKVEEQPPPRKKGAKAAKIAEVP

Query:  ETLEQRLIEAARPVEVLRFSMGDTNPEAEKSEHYSQISGQKRKHDDLEIVQDSGDADGAILWRANYDEFIRCLRHKACIEHVRSQFDDGVVNVLSAILEA
        ETLEQR++E+ARP+EVLRFSMGDTN EAEKSEHYSQISGQKRKHDDLE+VQDSGDAD  ILWRAN+DEFIRCLRHKACIEHVRSQFDDGVVNVLSAILEA
Subjt:  ETLEQRLIEAARPVEVLRFSMGDTNPEAEKSEHYSQISGQKRKHDDLEIVQDSGDADGAILWRANYDEFIRCLRHKACIEHVRSQFDDGVVNVLSAILEA

Query:  TRSSEKIVKTEITVPLSLDNIYEEVMKNEVGRSMTLDRVEASLAALGCPGMDDYKINLRRIIEQAQIDEVESIVLKRYGRDAYRMFRFLSKTGGLVETEK
        TRSSEKIVKTEITVPLSLDNIYEEVMKNEVGRSMTLDRVEASL++LGCPGMDDY+INLR+IIEQAQIDEVESIVLKRYGRDAYRMFRFLSKTGGLVETEK
Subjt:  TRSSEKIVKTEITVPLSLDNIYEEVMKNEVGRSMTLDRVEASLAALGCPGMDDYKINLRRIIEQAQIDEVESIVLKRYGRDAYRMFRFLSKTGGLVETEK

Query:  ISDSSFVDKNEAPKILYRLWKDEYLYMEKVALTVPRHSLCLLWRVDRYNLWEHVLDEMYHASLNLQLRLAHEIEENKELLSLPKDDNNKPLVKRMHHFEN
        ISDSSFVDKNEAPKILYRLWKDEYLYMEKVALTVPRHSLCLLWRVDRYNLWEHVLDEMYHASLNLQLR A+E+EENKELLSLP D+ N+PL+KR    + 
Subjt:  ISDSSFVDKNEAPKILYRLWKDEYLYMEKVALTVPRHSLCLLWRVDRYNLWEHVLDEMYHASLNLQLRLAHEIEENKELLSLPKDDNNKPLVKRMHHFEN

Query:  VRNLLRSSLVKLDDALMLFHDF
        VR LL+SSL+KLDDALMLFHDF
Subjt:  VRNLLRSSLVKLDDALMLFHDF

TrEMBL top hits

e value

%identity

Alignment

A0A0A0LBF3 DNA-directed RNA polymerase III subunit RPC3

5.5e-265

91.19

Show/hide

Query:  MVMTQYGIKYAIHIMTAHFGNLVAKVCETLLRKGPLTLRLLIRFTELTPSQVNNSLLILIQHNCVQAFTDVTEGEFGDAPKDDTQYLALFSNILHRMRFS
        MVMTQYGIKYA+HIMTAHFGNLVAKVCETLLRKGPLTLRLLIRFTELTPSQVNNSLLILIQHNCVQAFTDVTEGEFGDAPKDDT YLALFSNILHRMRFS
Subjt:  MVMTQYGIKYAIHIMTAHFGNLVAKVCETLLRKGPLTLRLLIRFTELTPSQVNNSLLILIQHNCVQAFTDVTEGEFGDAPKDDTQYLALFSNILHRMRFS

Query:  KFLAIASQKLGEDKDCQELLEGLLQNGRLSMEQMVERAEST------------------------------PEPTLSPKVEEQPPPRKKGAKAAKIAEVP
        KF+AIASQKLG+DK+CQELLEGLLQNGRLSMEQ+VERAES+                              PEPTLSPKVEE PPPRK+GAKAAKI+EVP
Subjt:  KFLAIASQKLGEDKDCQELLEGLLQNGRLSMEQMVERAEST------------------------------PEPTLSPKVEEQPPPRKKGAKAAKIAEVP

Query:  ETLEQRLIEAARPVEVLRFSMGDTNPEAEKSEHYSQISGQKRKHDDLEIVQDSGDADGAILWRANYDEFIRCLRHKACIEHVRSQFDDGVVNVLSAILEA
        ETLEQRLIEAARPVEVLRFSMGDTNPEAEKSEH+SQISGQKRKHDDLEI QDSGDADG ILWRANYDEFIRCLRHKACIEHVRSQFDDGVVNVLSAILEA
Subjt:  ETLEQRLIEAARPVEVLRFSMGDTNPEAEKSEHYSQISGQKRKHDDLEIVQDSGDADGAILWRANYDEFIRCLRHKACIEHVRSQFDDGVVNVLSAILEA

Query:  TRSSEKIVKTEITVPLSLDNIYEEVMKNEVGRSMTLDRVEASLAALGCPGMDDYKINLRRIIEQAQIDEVESIVLKRYGRDAYRMFRFLSKTGGLVETEK
        TRSSEKIVKTEITVPLSLDNIYEEVMKNEVGRSMTLDRVEASLAALGCPGMDDYKINLRRIIEQAQ DEVESIVLKRYGRDAYRMFRFLSKTGGLVETEK
Subjt:  TRSSEKIVKTEITVPLSLDNIYEEVMKNEVGRSMTLDRVEASLAALGCPGMDDYKINLRRIIEQAQIDEVESIVLKRYGRDAYRMFRFLSKTGGLVETEK

Query:  ISDSSFVDKNEAPKILYRLWKDEYLYMEKVALTVPRHSLCLLWRVDRYNLWEHVLDEMYHASLNLQLRLAHEIEENKELLSLPKDDNNKPLVKRMHHFEN
        ISDSSFVDKNEAPKILYRLWKDEYLYMEKVALTVPRHSLCLLWRVDRYNLWEHVLDEMYHASLNLQLRLAHEIEENKELLSLPKD+NNKPLVK+MHHFEN
Subjt:  ISDSSFVDKNEAPKILYRLWKDEYLYMEKVALTVPRHSLCLLWRVDRYNLWEHVLDEMYHASLNLQLRLAHEIEENKELLSLPKDDNNKPLVKRMHHFEN

Query:  VRNLLRSSLVKLDDALMLFHDF
        VRNLLRSSLVKLDDALMLFHDF
Subjt:  VRNLLRSSLVKLDDALMLFHDF

A0A1S3AYY3 DNA-directed RNA polymerase III subunit RPC3

2.9e-266

Show/hide

Query:  MVMTQYGIKYAIHIMTAHFGNLVAKVCETLLRKGPLTLRLLIRFTELTPSQVNNSLLILIQHNCVQAFTDVTEGEFGDAPKDDTQYLALFSNILHRMRFS
        MVMTQYGIKYA+HIMTAHFGNLVAKVCETLLRKGPLTLRLLIRFTELTPSQVNNSLLILIQHNCVQAFTDVTEGEFGDAPKDDTQYLALFSNILHRMRFS
Subjt:  MVMTQYGIKYAIHIMTAHFGNLVAKVCETLLRKGPLTLRLLIRFTELTPSQVNNSLLILIQHNCVQAFTDVTEGEFGDAPKDDTQYLALFSNILHRMRFS

Query:  KFLAIASQKLGEDKDCQELLEGLLQNGRLSMEQMVERAEST------------------------------PEPTLSPKVEEQPPPRKKGAKAAKIAEVP
        KFLAIASQKLG+DK+CQELLEGLLQNGRLSMEQMVERAES+                              PEPTLSPKVEEQPPPRK+GAKAAKI EVP
Subjt:  KFLAIASQKLGEDKDCQELLEGLLQNGRLSMEQMVERAEST------------------------------PEPTLSPKVEEQPPPRKKGAKAAKIAEVP

Query:  ETLEQRLIEAARPVEVLRFSMGDTNPEAEKSEHYSQISGQKRKHDDLEIVQDSGDADGAILWRANYDEFIRCLRHKACIEHVRSQFDDGVVNVLSAILEA
        ETLEQRLIEAARPVEVLRFSMGDTNPEAEKSEHYSQISGQKRKHD+LEI QDSG ADGAILWRANYDEFIRCLRHKAC+EHVRSQFDDGVVNVLSA LEA
Subjt:  ETLEQRLIEAARPVEVLRFSMGDTNPEAEKSEHYSQISGQKRKHDDLEIVQDSGDADGAILWRANYDEFIRCLRHKACIEHVRSQFDDGVVNVLSAILEA

Query:  TRSSEKIVKTEITVPLSLDNIYEEVMKNEVGRSMTLDRVEASLAALGCPGMDDYKINLRRIIEQAQIDEVESIVLKRYGRDAYRMFRFLSKTGGLVETEK
        TRSSEKIVKTEITVPLSLDNIYEEVMKNEVGRSMTLDRVEASLAALGCPGMDDYKINLRRI+EQAQ DEVESIVLKRYGRDAYRMFRFLSKTGGLVETEK
Subjt:  TRSSEKIVKTEITVPLSLDNIYEEVMKNEVGRSMTLDRVEASLAALGCPGMDDYKINLRRIIEQAQIDEVESIVLKRYGRDAYRMFRFLSKTGGLVETEK

Query:  ISDSSFVDKNEAPKILYRLWKDEYLYMEKVALTVPRHSLCLLWRVDRYNLWEHVLDEMYHASLNLQLRLAHEIEENKELLSLPKDDNNKPLVKRMHHFEN
        ISDSSFVDKNEAPKILYRLWKDEYLYMEKVA+TVPRHSLCLLWRVDRYNLWEHVLDEMYHASLNLQLRLAHEIEENKELLSLPKD+NNKPLVK+MHHFE 
Subjt:  ISDSSFVDKNEAPKILYRLWKDEYLYMEKVALTVPRHSLCLLWRVDRYNLWEHVLDEMYHASLNLQLRLAHEIEENKELLSLPKDDNNKPLVKRMHHFEN

Query:  VRNLLRSSLVKLDDALMLFHDF
        VRNLLRSSLVKLDDALMLFHDF
Subjt:  VRNLLRSSLVKLDDALMLFHDF

A0A5A7SSU3 DNA-directed RNA polymerase III subunit RPC3

8.6e-242

90.61

Show/hide

Query:  MVMTQYGIKYAIHIMTAHFGNLVAKVCETLLRKGPLTLRLLIRFTELTPSQVNNSLLILIQHNCVQAFTDVTEGEFGDAPKDDTQYLALFSNILHRMRFS
        MVMTQYGIKYA+HIMTAHFGNLVAKVCETLLRKGPLTLRLLIRFTELTPSQVNNSLLILIQHNCVQAFTDVTEGEFGDAPKDDTQYLALFSNILHRMRFS
Subjt:  MVMTQYGIKYAIHIMTAHFGNLVAKVCETLLRKGPLTLRLLIRFTELTPSQVNNSLLILIQHNCVQAFTDVTEGEFGDAPKDDTQYLALFSNILHRMRFS

Query:  KFLAIASQKLGEDKDCQELLEGLLQNGRLSMEQMVERAEST------------------------------PEPTLSPKVEEQPPPRKKGAKAAKIAEVP
        KFLAIASQKLG+DK+CQELLEGLLQNGRLSMEQMVERAES+                              PEPTLSPKVEEQPPPRK+GAKAAKI EVP
Subjt:  KFLAIASQKLGEDKDCQELLEGLLQNGRLSMEQMVERAEST------------------------------PEPTLSPKVEEQPPPRKKGAKAAKIAEVP

Query:  ETLEQRLIEAARPVEVLRFSMGDTNPEAEKSEHYSQISGQKRKHDDLEIVQDSGDADGAILWRANYDEFIRCLRHKACIEHVRSQFDDGVVNVLSAILEA
        ETLEQRLIEAARPVEVLRFSMGDTNPEAEKSEHYSQISGQKRKHD+LEI QDSG ADGAILWRANYDEFIRCLRHKAC+EHVRSQFDDGVVNVLSA LEA
Subjt:  ETLEQRLIEAARPVEVLRFSMGDTNPEAEKSEHYSQISGQKRKHDDLEIVQDSGDADGAILWRANYDEFIRCLRHKACIEHVRSQFDDGVVNVLSAILEA

Query:  TRSSEKIVKTEITVPLSLDNIYEEVMKNEVGRSMTLDRVEASLAALGCPGMDDYKINLRRIIEQAQIDEVESIVLKRYGRDAYRMFRFLSKTGGLVETEK
        TRSSEKIVKTEITVPLSLDNIYEEVMKNEVGRSMTLDRVEASLAALGCPGMDDYKINLRRI+EQAQ DEVESIVLKRYGRDAYRMFRFLSKTGGLVETEK
Subjt:  TRSSEKIVKTEITVPLSLDNIYEEVMKNEVGRSMTLDRVEASLAALGCPGMDDYKINLRRIIEQAQIDEVESIVLKRYGRDAYRMFRFLSKTGGLVETEK

Query:  ISDSSFVDKNEAPKILYRLWKDEYLYMEKVALTVPRHSLCLLWRVDRYNLWEHVLDEMYHASLNLQLRLAHEIEENKEL
        ISDSSFVDKNEAPKILYRLWKDEYLYMEKVA+TVPRHSLCLLWRVDRYNLWEHVLDEMYHASLNLQLRLAHEIEENKE+
Subjt:  ISDSSFVDKNEAPKILYRLWKDEYLYMEKVALTVPRHSLCLLWRVDRYNLWEHVLDEMYHASLNLQLRLAHEIEENKEL

A0A5D3DHJ0 DNA-directed RNA polymerase III subunit RPC3

8.6e-242

90.61

Show/hide

Query:  MVMTQYGIKYAIHIMTAHFGNLVAKVCETLLRKGPLTLRLLIRFTELTPSQVNNSLLILIQHNCVQAFTDVTEGEFGDAPKDDTQYLALFSNILHRMRFS
        MVMTQYGIKYA+HIMTAHFGNLVAKVCETLLRKGPLTLRLLIRFTELTPSQVNNSLLILIQHNCVQAFTDVTEGEFGDAPKDDTQYLALFSNILHRMRFS
Subjt:  MVMTQYGIKYAIHIMTAHFGNLVAKVCETLLRKGPLTLRLLIRFTELTPSQVNNSLLILIQHNCVQAFTDVTEGEFGDAPKDDTQYLALFSNILHRMRFS

Query:  KFLAIASQKLGEDKDCQELLEGLLQNGRLSMEQMVERAEST------------------------------PEPTLSPKVEEQPPPRKKGAKAAKIAEVP
        KFLAIASQKLG+DK+CQELLEGLLQNGRLSMEQMVERAES+                              PEPTLSPKVEEQPPPRK+GAKAAKI EVP
Subjt:  KFLAIASQKLGEDKDCQELLEGLLQNGRLSMEQMVERAEST------------------------------PEPTLSPKVEEQPPPRKKGAKAAKIAEVP

Query:  ETLEQRLIEAARPVEVLRFSMGDTNPEAEKSEHYSQISGQKRKHDDLEIVQDSGDADGAILWRANYDEFIRCLRHKACIEHVRSQFDDGVVNVLSAILEA
        ETLEQRLIEAARPVEVLRFSMGDTNPEAEKSEHYSQISGQKRKHD+LEI QDSG ADGAILWRANYDEFIRCLRHKAC+EHVRSQFDDGVVNVLSA LEA
Subjt:  ETLEQRLIEAARPVEVLRFSMGDTNPEAEKSEHYSQISGQKRKHDDLEIVQDSGDADGAILWRANYDEFIRCLRHKACIEHVRSQFDDGVVNVLSAILEA

Query:  TRSSEKIVKTEITVPLSLDNIYEEVMKNEVGRSMTLDRVEASLAALGCPGMDDYKINLRRIIEQAQIDEVESIVLKRYGRDAYRMFRFLSKTGGLVETEK
        TRSSEKIVKTEITVPLSLDNIYEEVMKNEVGRSMTLDRVEASLAALGCPGMDDYKINLRRI+EQAQ DEVESIVLKRYGRDAYRMFRFLSKTGGLVETEK
Subjt:  TRSSEKIVKTEITVPLSLDNIYEEVMKNEVGRSMTLDRVEASLAALGCPGMDDYKINLRRIIEQAQIDEVESIVLKRYGRDAYRMFRFLSKTGGLVETEK

Query:  ISDSSFVDKNEAPKILYRLWKDEYLYMEKVALTVPRHSLCLLWRVDRYNLWEHVLDEMYHASLNLQLRLAHEIEENKEL
        ISDSSFVDKNEAPKILYRLWKDEYLYMEKVA+TVPRHSLCLLWRVDRYNLWEHVLDEMYHASLNLQLRLAHEIEENKE+
Subjt:  ISDSSFVDKNEAPKILYRLWKDEYLYMEKVALTVPRHSLCLLWRVDRYNLWEHVLDEMYHASLNLQLRLAHEIEENKEL

A0A6J1G256 DNA-directed RNA polymerase III subunit RPC3

9.8e-238

80.84

Show/hide

Query:  MVMTQYGIKYAIHIMTAHFGNLVAKVCETLLRKGPLTLRLLIRFTELTPSQVNNSLLILIQHNCVQAFTDVTEGEFGDAPKDDTQYLALFSNILHRMRFS
        M  TQYGIKYA+HI+TAHFGNLVAKVCETLLR+GPLTLRLL+RFTEL+ SQ+NNSLLILIQHNCVQAFT VTEGEFGDAPK DTQYLALFSNILHRMRFS
Subjt:  MVMTQYGIKYAIHIMTAHFGNLVAKVCETLLRKGPLTLRLLIRFTELTPSQVNNSLLILIQHNCVQAFTDVTEGEFGDAPKDDTQYLALFSNILHRMRFS

Query:  KFLAIASQKLGEDKDCQELLEGLLQNGRLSMEQMVERAEST------------------------------PEPTLSPKVEEQPPPRKKGAKAAKIAEVP
        KFLAIAS+KL +DKDC+ELLEGLLQNGRLSMEQ++ERA+S+                              PEPTLSP+VEEQPPPRK+GAKAAK++EVP
Subjt:  KFLAIASQKLGEDKDCQELLEGLLQNGRLSMEQMVERAEST------------------------------PEPTLSPKVEEQPPPRKKGAKAAKIAEVP

Query:  ETLEQRLIEAARPVEVLRFSMGDTNPEAEKSEHYSQISGQKRKHDDLEIVQDSGDADGAILWRANYDEFIRCLRHKACIEHVRSQFDDGVVNVLSAILEA
         TLEQRL+E+ARP+EV+RFS+G+TN EAE+SEHYS ISGQKRK  DL+++Q+SGDADG ILWRAN+DEF+RCLRHKACIEHVRSQFDDG VNVLSAILEA
Subjt:  ETLEQRLIEAARPVEVLRFSMGDTNPEAEKSEHYSQISGQKRKHDDLEIVQDSGDADGAILWRANYDEFIRCLRHKACIEHVRSQFDDGVVNVLSAILEA

Query:  TRSSEKIVKTEITVPLSLDNIYEEVMKNEVGRSMTLDRVEASLAALGCPGMDDYKINLRRIIEQAQIDEVESIVLKRYGRDAYRMFRFLSKTGGLVETEK
        TRSSEKIVKTEITVPLSLDNIYEEVMKNEVGRSMTLDRVEASL+ALGC GM+DYKINL++IIEQAQIDEVESIVLKRYGRDAYRMFRFLSKTGGLVETEK
Subjt:  TRSSEKIVKTEITVPLSLDNIYEEVMKNEVGRSMTLDRVEASLAALGCPGMDDYKINLRRIIEQAQIDEVESIVLKRYGRDAYRMFRFLSKTGGLVETEK

Query:  ISDSSFVDKNEAPKILYRLWKDEYLYMEKVALTVPRHSLCLLWRVDRYNLWEHVLDEMYHASLNLQLRLAHEIEENKELLSLPKDDNNKPLVKRMHHFEN
        ISDS+FVDKNEAPKILYRLWKDEYLYMEKVA+TVPRHSLCLLWRVDRYNLWEHVLDEMYHASLNLQLR A+E+E++KELL+LP D    PL KR +   N
Subjt:  ISDSSFVDKNEAPKILYRLWKDEYLYMEKVALTVPRHSLCLLWRVDRYNLWEHVLDEMYHASLNLQLRLAHEIEENKELLSLPKDDNNKPLVKRMHHFEN

Query:  VRNLLRSSLVKLDDALMLFHDF
        VR LL SSL+KLDDALMLFHDF
Subjt:  VRNLLRSSLVKLDDALMLFHDF

SwissProt top hits

e value

%identity

Alignment

Q2TBL4 DNA-directed RNA polymerase III subunit RPC3

3.0e-18

24.49

Show/hide

Query:  MTQYGIKYAIHIMTAHFGNLVAKVCETLLRKGPLTLRLLIRFTELTPSQVNNSLLILIQHNCVQAFTDVTEGEFGDAPKDDTQYLALFSNILHRMRFSKF
        MTQ  IK    ++  HFG +V K+   L+R G   LR++   T  +  QV  +L +LIQHN V          +    +   +Y A  + +L  +R+ ++
Subjt:  MTQYGIKYAIHIMTAHFGNLVAKVCETLLRKGPLTLRLLIRFTELTPSQVNNSLLILIQHNCVQAFTDVTEGEFGDAPKDDTQYLALFSNILHRMRFSKF

Query:  LAIASQKLGEDKDCQELLEGLLQNGRLSMEQMVERAESTPEPTLSPKVEEQPPPRKKGAKAAKIAEVPETLEQRLIE---AARPVEVLRFSMGDTNPE--
        +  A     +  +   ++E LL NG+++M  +V+            KV ++     +  K    AEV  T   RL++     R   V      DT P   
Subjt:  LAIASQKLGEDKDCQELLEGLLQNGRLSMEQMVERAESTPEPTLSPKVEEQPPPRKKGAKAAKIAEVPETLEQRLIE---AARPVEVLRFSMGDTNPE--

Query:  ------AEKSEH----YSQISGQKRKHDDLEIVQDSGDA--------------DGAILWRANYDEFIRCLRHKACIEHVRSQFDDGVVNVLSAILEATRS
              +EK  +     S I   KR+    E       A              D  I W+AN D F +  R +A +  V ++ D     ++  +L   R 
Subjt:  ------AEKSEH----YSQISGQKRKHDDLEIVQDSGDA--------------DGAILWRANYDEFIRCLRHKACIEHVRSQFDDGVVNVLSAILEATRS

Query:  SEKIVKT--EITVPLSLDNIYE------EVMKNEVGRSMTL--DRVEASLAALGCPGMDDYKINLRRIIEQAQIDEVESIVLKRYGRDAYRMFRFLSKTG
        SE    +    T PLS + I+        + K  + + +TL  D     +   G  G   Y INL + +       +ES+V +R+G    R+FR + +  
Subjt:  SEKIVKT--EITVPLSLDNIYE------EVMKNEVGRSMTL--DRVEASLAALGCPGMDDYKINLRRIIEQAQIDEVESIVLKRYGRDAYRMFRFLSKTG

Query:  GLVETEKISDSSFVDKNEAPKILYRLWKDEYLYMEKVALTVPRHS---LCLLWRVDRYNLWEHVLDEMYHASLNLQLRLAHEIEENKELL
         L E +++ D + +   EA  +LY++  + ++ ++++  T P H+      L+ V+  +    +L   Y +  NL  R   E +ENK LL
Subjt:  GLVETEKISDSSFVDKNEAPKILYRLWKDEYLYMEKVALTVPRHS---LCLLWRVDRYNLWEHVLDEMYHASLNLQLRLAHEIEENKELL

Q5ATV8 DNA-directed RNA polymerase III subunit rpc3

3.2e-04

28.44

Show/hide

Query:  TQYGIKYAIHIMTAHFGNLVAKVCETLLRKGPLTLRLLIRFTELTPSQVNNSLLILIQHNCVQAFTDVTEGEFGDAPKDDTQYLALFSNILHRMRFSKFL
        +QY  +  + ++  +FG L  ++  TL R   LTL  L+  T L+ +++  +L+ +IQH+ V  +T V EG         T Y A      + +R  K L
Subjt:  TQYGIKYAIHIMTAHFGNLVAKVCETLLRKGPLTLRLLIRFTELTPSQVNNSLLILIQHNCVQAFTDVTEGEFGDAPKDDTQYLALFSNILHRMRFSKFL

Query:  AIASQKLGE
             +LG+
Subjt:  AIASQKLGE

Q5XIL3 DNA-directed RNA polymerase III subunit RPC3

1.7e-16

22.59

Show/hide

Query:  MTQYGIKYAIHIMTAHFGNLVAKVCETLLRKGPLTLRLLIRFTELTPSQVNNSLLILIQHNCVQAFTDVTEGEFGDAPKDDTQYLALFSNILHRMRFSKF
        MTQ  IK    ++  HFG +V K+   L+R G   LR++   T+ +  QV  +L +LI HN V          +    +   +Y A  S +L  +R+ ++
Subjt:  MTQYGIKYAIHIMTAHFGNLVAKVCETLLRKGPLTLRLLIRFTELTPSQVNNSLLILIQHNCVQAFTDVTEGEFGDAPKDDTQYLALFSNILHRMRFSKF

Query:  LAIASQKLGEDKDCQELLEGLLQNGRLSMEQMVER-AESTPEPTLSPKVEEQPPPRKKGAKAA------KIAEVPET----------LEQRLIEAARPVE
        +       G+  +   ++E LL NG+++M  +V++ A+   E     K  +         + A      +   VP+T              +I       
Subjt:  LAIASQKLGEDKDCQELLEGLLQNGRLSMEQMVER-AESTPEPTLSPKVEEQPPPRKKGAKAA------KIAEVPET----------LEQRLIEAARPVE

Query:  VLRFSMGDTNPEAEKSEHYSQISGQKRKHDDLEIVQDSGDADGAILWRANYDEFIRCLRHKACIEHVRSQFDDGVVNVLSAILEATRSSEKIVKT--EIT
        V + S+         S+     +G+ +         +    D  I W+ N D F +  R +A +  V ++ D     ++  +L   R SE    +    T
Subjt:  VLRFSMGDTNPEAEKSEHYSQISGQKRKHDDLEIVQDSGDADGAILWRANYDEFIRCLRHKACIEHVRSQFDDGVVNVLSAILEATRSSEKIVKT--EIT

Query:  VPLSLDNIYE------EVMKNEVGRSMTL--DRVEASLAALGCPGMDDYKINLRRIIEQAQIDEVESIVLKRYGRDAYRMFRFLSKTGGLVETEKISDSS
         PLS + I+        + K  + + +TL  D     +   G  G   Y INL + +       +ES++ +R+G    R+FR + +   L E +++ D +
Subjt:  VPLSLDNIYE------EVMKNEVGRSMTL--DRVEASLAALGCPGMDDYKINLRRIIEQAQIDEVESIVLKRYGRDAYRMFRFLSKTGGLVETEKISDSS

Query:  FVDKNEAPKILYRLWKDEYLYMEKVALTVPRHS---LCLLWRVDRYNLWEHVLDEMYHASLNLQLRLAHEIEENKELL
         +   EA  +LY++  + ++ ++++  T P H+      L+ V+  +    +L   Y +  NL  R   E +ENK LL
Subjt:  FVDKNEAPKILYRLWKDEYLYMEKVALTVPRHS---LCLLWRVDRYNLWEHVLDEMYHASLNLQLRLAHEIEENKELL

Q9BUI4 DNA-directed RNA polymerase III subunit RPC3

1.4e-18

24.29

Show/hide

Query:  MTQYGIKYAIHIMTAHFGNLVAKVCETLLRKGPLTLRLLIRFTELTPSQVNNSLLILIQHNCVQAFTDVTEGEFGDAPKDDTQYLALFSNILHRMRFSKF
        MTQ  IK    ++  HFG +V K+   L+R G   LR++   T  +  QV  +L +L+QHN V          +    +   +Y A  S +L  +R+ ++
Subjt:  MTQYGIKYAIHIMTAHFGNLVAKVCETLLRKGPLTLRLLIRFTELTPSQVNNSLLILIQHNCVQAFTDVTEGEFGDAPKDDTQYLALFSNILHRMRFSKF

Query:  LAIASQKLGEDKDCQELLEGLLQNGRLSMEQMVERAESTPEPTLSPKVEEQPPPRKKGAKAAKIAEVPETL----EQRLIEAARPVEVLRFSMGDTNPEA
        +   ++ L  D   + ++E LL NG+L+M  +V+            KV ++     +  K    AEV  T     +   ++    V     S     P A
Subjt:  LAIASQKLGEDKDCQELLEGLLQNGRLSMEQMVERAESTPEPTLSPKVEEQPPPRKKGAKAAKIAEVPETL----EQRLIEAARPVEVLRFSMGDTNPEA

Query:  ------EKSEH----YSQISGQKRKHDDLEIVQDSGDA--------------DGAILWRANYDEFIRCLRHKACIEHVRSQFD---DGVVNVLSAILEAT
              EK  +     S I   KR+    E       A              D  I W+AN D F +  R +A +  V ++ D     +V  +  + E T
Subjt:  ------EKSEH----YSQISGQKRKHDDLEIVQDSGDA--------------DGAILWRANYDEFIRCLRHKACIEHVRSQFD---DGVVNVLSAILEAT

Query:  RSSEKIVKTEITVPLSLDNIYE------EVMKNEVGRSMTL--DRVEASLAALGCPGMDDYKINLRRIIEQAQIDEVESIVLKRYGRDAYRMFRFLSKTG
         SS        T PLS + I+        + K  + + +TL  D     +   G  G   Y INL + +       +ES+V +R+G    R+FR + +  
Subjt:  RSSEKIVKTEITVPLSLDNIYE------EVMKNEVGRSMTL--DRVEASLAALGCPGMDDYKINLRRIIEQAQIDEVESIVLKRYGRDAYRMFRFLSKTG

Query:  GLVETEKISDSSFVDKNEAPKILYRLWKDEYLYMEKVALTVPRHS---LCLLWRVDRYNLWEHVLDEMYHASLNLQLRLAHEIEENKELL
          +E +++ D + +   EA  +LY++  + ++ ++++  T P H+      L+ V+  +    +L   Y +  NL  R   E +ENK LL
Subjt:  GLVETEKISDSSFVDKNEAPKILYRLWKDEYLYMEKVALTVPRHS---LCLLWRVDRYNLWEHVLDEMYHASLNLQLRLAHEIEENKELL

Q9D483 DNA-directed RNA polymerase III subunit RPC3

6.3e-16

22.34

Show/hide

Query:  MTQYGIKYAIHIMTAHFGNLVAKVCETLLRKGPLTLRLLIRFTELTPSQVNNSLLILIQHNCVQAFTDVTEGEFGDAPKDDTQYLALFSNILHRMRFSKF
        MTQ  IK    ++  HFG +V K+   L+R G   LR++   T+ +  QV  +L +LI HN V          +    +   +Y A  S +L  +R+ ++
Subjt:  MTQYGIKYAIHIMTAHFGNLVAKVCETLLRKGPLTLRLLIRFTELTPSQVNNSLLILIQHNCVQAFTDVTEGEFGDAPKDDTQYLALFSNILHRMRFSKF

Query:  LAIASQKLGEDKDCQELLEGLLQNGRLSMEQMVER-AESTPEPTLSPKVEEQPPPRKKGAKAA------KIAEVPET-LEQRLIEAARPVEVLR------
        +       G+  +   ++E LL NG+++M  +V++ A+   E     K  +         + A      +   VP+T    R      P  V+       
Subjt:  LAIASQKLGEDKDCQELLEGLLQNGRLSMEQMVER-AESTPEPTLSPKVEEQPPPRKKGAKAA------KIAEVPET-LEQRLIEAARPVEVLR------

Query:  ------FSMGDTNPEAEKSEHYSQISGQKRKHDDLEIVQDSGDADGAILWRANYDEFIRCLRHKACIEHVRSQFDDGVVNVLSAILEATRSSEKIVKTEI
                 G     +++       + + R  D+ E   D G     I W+ N D F +  R +A +  V ++ D     ++  +L  +  +        
Subjt:  ------FSMGDTNPEAEKSEHYSQISGQKRKHDDLEIVQDSGDADGAILWRANYDEFIRCLRHKACIEHVRSQFDDGVVNVLSAILEATRSSEKIVKTEI

Query:  TVPLSLDNIYE------EVMKNEVGRSMTL--DRVEASLAALGCPGMDDYKINLRRIIEQAQIDEVESIVLKRYGRDAYRMFRFLSKTGGLVETEKISDS
        T PLS + I+        + K  + + +TL  D     +   G  G   + INL + +       +ES++ +R+G    R+FR + +   L E +++ D 
Subjt:  TVPLSLDNIYE------EVMKNEVGRSMTL--DRVEASLAALGCPGMDDYKINLRRIIEQAQIDEVESIVLKRYGRDAYRMFRFLSKTGGLVETEKISDS

Query:  SFVDKNEAPKILYRLWKDEYLYMEKVALTVPRHS---LCLLWRVDRYNLWEHVLDEMYHASLNLQLRLAHEIEENKELL
        + +   EA  +LY++  + ++ ++++  T P H+      L+ V+  +    +L   Y +  NL  R   E +ENK LL
Subjt:  SFVDKNEAPKILYRLWKDEYLYMEKVALTVPRHS---LCLLWRVDRYNLWEHVLDEMYHASLNLQLRLAHEIEENKELL

Arabidopsis top hits

e value

%identity

Alignment

AT3G49000.1 RNA polymerase III subunit RPC82 family protein

2.5e-116

44.28

Show/hide

Query:  MVMTQYGIKYAIHIMTAHFGNLVAKVCETLLRKGPLTLRLLIRFTE--LTPSQVNNSLLILIQHNCVQAFTDVTEGEFGDAPKDDTQYLALFSNILHRMR
        M M+++GI YAIHI+T  FG++V+KVCE LLRKGPL+ R + R  E  +  ++V + L +LIQHNCVQAF+   E   G   K   QY+ LF+NILHR+R
Subjt:  MVMTQYGIKYAIHIMTAHFGNLVAKVCETLLRKGPLTLRLLIRFTE--LTPSQVNNSLLILIQHNCVQAFTDVTEGEFGDAPKDDTQYLALFSNILHRMR

Query:  FSKFLAIASQKLGEDKDCQELLEGLLQNGRLSMEQMVERAES---------------------------TPEPTLSPKVEEQPPPRKKGAKAAKIAEVPE
        ++KF  I +++L  D  C  +L+GLL NGRL++ Q +ER                              +PEP L  K  E+ P +++GAKAAKI + PE
Subjt:  FSKFLAIASQKLGEDKDCQELLEGLLQNGRLSMEQMVERAES---------------------------TPEPTLSPKVEEQPPPRKKGAKAAKIAEVPE

Query:  TLEQRLIEAARPVEVLRFSM-GDTNPEAEKSEHYSQISGQKRKHDDLEIVQDSGDADGAILWRANYDEFIRCLRHKACIEHVRSQFDDGVVNVLSAILEA
        TLE++++EAA PV+ +RF +  + +  +  ++  S I+  KRK  D+    D+ D+   ++WR N++EFI  LRHKAC+E V+ + D+G   VL A+LE 
Subjt:  TLEQRLIEAARPVEVLRFSM-GDTNPEAEKSEHYSQISGQKRKHDDLEIVQDSGDADGAILWRANYDEFIRCLRHKACIEHVRSQFDDGVVNVLSAILEA

Query:  TRSSEKIVKTEITVPLSLDNIYEEVMKNEVGRSMTLDRVEASLAALGCPGM----------DDYKINLRRIIEQAQIDEVESIVLKRYGRDAYRMFRFLS
         RS EK VKT+ + P+S+ +IYEEV+K E GR+M  +RVEA L  L               D Y ++ + II  AQ DE+E++V++RYG++A+RMFR+LS
Subjt:  TRSSEKIVKTEITVPLSLDNIYEEVMKNEVGRSMTLDRVEASLAALGCPGM----------DDYKINLRRIIEQAQIDEVESIVLKRYGRDAYRMFRFLS

Query:  KTGGLVETEKISDSSFVDKNEAPKILYRLWKDEYLYMEKVALTVP-RHSLCLLWRVDRYNLWEHVLDEMYHASLNLQLRLAHEIEENKELLSLPKDDNNK
        + G  VET+KI+D++  +K + P+ L ++WKD YL+M+K+A+T P  ++  LLW+V++  +   +LDEMYHASLNL LRLAHE+E  KELL LP D    
Subjt:  KTGGLVETEKISDSSFVDKNEAPKILYRLWKDEYLYMEKVALTVP-RHSLCLLWRVDRYNLWEHVLDEMYHASLNLQLRLAHEIEENKELLSLPKDDNNK

Query:  PLVKRMHHFENVRNLLRSSLVKLDDALMLFHDF
        PL +R+   +  R LL S++ KLDDA+MLFHDF
Subjt:  PLVKRMHHFENVRNLLRSSLVKLDDALMLFHDF

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGGTGATGACTCAGTACGGCATCAAATATGCCATCCACATTATGACTGCACACTTTGGAAATCTCGTCGCTAAAGTGTGCGAAACTCTGCTCCGAAAGGGACCTCTGAC
GCTGAGACTTCTTATACGATTCACAGAACTTACCCCATCCCAGGTCAACAACTCCCTTCTTATTCTCATCCAACATAATTGCGTCCAAGCCTTCACTGATGTGACAGAAG
GTGAGTTTGGAGATGCACCCAAGGATGATACACAATACTTGGCATTGTTTAGTAATATACTTCATCGTATGAGGTTTTCCAAATTCCTGGCAATTGCTTCCCAAAAGCTT
GGGGAAGATAAAGATTGTCAAGAACTTCTCGAGGGTCTGCTGCAGAATGGTAGGCTTTCAATGGAACAAATGGTTGAAAGAGCAGAGTCAACCCCAGAACCAACTCTTTC
GCCCAAAGTTGAAGAACAACCTCCTCCTAGAAAAAAAGGTGCTAAGGCTGCCAAGATAGCTGAGGTGCCAGAGACCTTAGAACAGCGTCTTATAGAAGCAGCACGTCCAG
TGGAAGTTCTAAGATTTTCAATGGGTGATACCAACCCAGAAGCTGAAAAGAGTGAACATTATTCACAAATTTCTGGACAGAAGCGCAAACACGATGATCTAGAGATTGTA
CAAGATTCTGGAGATGCAGATGGTGCTATTCTTTGGCGTGCCAACTATGACGAGTTTATAAGATGTCTTAGACATAAGGCTTGCATTGAACATGTTAGATCACAGTTCGA
TGACGGAGTGGTAAATGTCTTGAGTGCCATTTTGGAGGCTACTCGAAGTTCTGAAAAAATCGTGAAAACAGAGATAACAGTTCCTTTATCATTGGATAACATATATGAGG
AGGTAATGAAGAATGAAGTAGGACGGAGTATGACCTTAGATCGGGTTGAAGCTTCCCTCGCTGCATTGGGTTGTCCGGGGATGGATGATTATAAAATTAATTTACGGAGG
ATCATCGAACAAGCTCAAATTGATGAGGTTGAATCAATTGTTTTGAAAAGATATGGAAGGGATGCTTACAGAATGTTCAGATTTCTGTCGAAAACTGGTGGCTTGGTCGA
GACAGAAAAGATTTCCGATAGTTCGTTTGTTGATAAGAATGAGGCACCTAAAATTTTATATAGATTGTGGAAGGACGAGTACCTGTACATGGAGAAAGTAGCTCTAACAG
TACCTAGACATTCACTATGCTTGTTGTGGAGAGTAGACAGATATAACTTATGGGAACATGTTCTGGATGAGATGTATCATGCTTCATTGAACTTGCAGCTACGACTGGCT
CATGAGATCGAAGAAAACAAAGAGCTTCTGAGTCTTCCAAAAGATGATAACAACAAACCGCTCGTGAAAAGAATGCATCATTTTGAGAATGTTAGAAACCTCCTGCGGTC
ATCGCTGGTGAAGCTCGACGATGCTTTAATGCTTTTCCATGACTTCTGA

mRNA sequence

Show/hide mRNA sequence

Protein sequence

Show/hide protein sequence

MVMTQYGIKYAIHIMTAHFGNLVAKVCETLLRKGPLTLRLLIRFTELTPSQVNNSLLILIQHNCVQAFTDVTEGEFGDAPKDDTQYLALFSNILHRMRFSKFLAIASQKL
GEDKDCQELLEGLLQNGRLSMEQMVERAESTPEPTLSPKVEEQPPPRKKGAKAAKIAEVPETLEQRLIEAARPVEVLRFSMGDTNPEAEKSEHYSQISGQKRKHDDLEIV
QDSGDADGAILWRANYDEFIRCLRHKACIEHVRSQFDDGVVNVLSAILEATRSSEKIVKTEITVPLSLDNIYEEVMKNEVGRSMTLDRVEASLAALGCPGMDDYKINLRR
IIEQAQIDEVESIVLKRYGRDAYRMFRFLSKTGGLVETEKISDSSFVDKNEAPKILYRLWKDEYLYMEKVALTVPRHSLCLLWRVDRYNLWEHVLDEMYHASLNLQLRLA
HEIEENKELLSLPKDDNNKPLVKRMHHFENVRNLLRSSLVKLDDALMLFHDF

PI0000142 (gene) of Melon (PI 482460) v1 genome