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PI0000182 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0000182
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionGag/pol protein
Genome locationchr10:8718782..8719476
RNA-Seq ExpressionPI0000182
SyntenyPI0000182
Gene Ontology termsGO:0006508 - proteolysis (biological process)
GO:0015074 - DNA integration (biological process)
GO:0003676 - nucleic acid binding (molecular function)
GO:0008234 - cysteine-type peptidase activity (molecular function)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0041821.1 gag/pol protein [Cucumis melo var. makuwa]2.3e-4574.62Show/hide
Query:  MILVIDDLRFVLIEECPLSPVRNASQIVRDAYDRWTKANEKARIYILSSMSDVLSKKHESMVTARQIMDSFQEMFGQPSIQIQHEAIKYVYNAHMKEGQS
        MILVIDD  FVL+EEC   P +NASQ V+DAYD WTK N+KAR+YIL+SMSD+LSKKHE MVTARQIMDSF+EMFGQPSIQI+ EAIKYVYNA MKEGQS
Subjt:  MILVIDDLRFVLIEECPLSPVRNASQIVRDAYDRWTKANEKARIYILSSMSDVLSKKHESMVTARQIMDSFQEMFGQPSIQIQHEAIKYVYNAHMKEGQS

Query:  VREHVLDMMVQFNVAETNGAVIDEQSQVHF
        V EHVLD+++ FNV E NG V DE+SQV +
Subjt:  VREHVLDMMVQFNVAETNGAVIDEQSQVHF

KAA0056413.1 gag/pol protein [Cucumis melo var. makuwa]3.5e-4674.62Show/hide
Query:  MILVIDDLRFVLIEECPLSPVRNASQIVRDAYDRWTKANEKARIYILSSMSDVLSKKHESMVTARQIMDSFQEMFGQPSIQIQHEAIKYVYNAHMKEGQS
        MILVI DLRFVL+EECP  P +NASQ V+DAYDRWTKAN+KA +YIL+SMSD+LSKKHE MVTARQI DS +EMFGQPSIQI+ EAIKYVYNA MK+GQS
Subjt:  MILVIDDLRFVLIEECPLSPVRNASQIVRDAYDRWTKANEKARIYILSSMSDVLSKKHESMVTARQIMDSFQEMFGQPSIQIQHEAIKYVYNAHMKEGQS

Query:  VREHVLDMMVQFNVAETNGAVIDEQSQVHF
        V+EH+L+M+V FNV + NGAV DE+SQV +
Subjt:  VREHVLDMMVQFNVAETNGAVIDEQSQVHF

KAA0063887.1 gag/pol protein [Cucumis melo var. makuwa]3.5e-4675.38Show/hide
Query:  MILVIDDLRFVLIEECPLSPVRNASQIVRDAYDRWTKANEKARIYILSSMSDVLSKKHESMVTARQIMDSFQEMFGQPSIQIQHEAIKYVYNAHMKEGQS
        MILVI DLRFVL+EECP  P +NASQ V+DAYD WTKAN+KA +Y+L+S+SD+LSKKHE MVTARQIMDS +EMFGQPSIQI+ EAIKYVYNA MKEGQS
Subjt:  MILVIDDLRFVLIEECPLSPVRNASQIVRDAYDRWTKANEKARIYILSSMSDVLSKKHESMVTARQIMDSFQEMFGQPSIQIQHEAIKYVYNAHMKEGQS

Query:  VREHVLDMMVQFNVAETNGAVIDEQSQVHF
        VREHVL M+V FNVAE N A+ DE+SQV +
Subjt:  VREHVLDMMVQFNVAETNGAVIDEQSQVHF

TYK15919.1 gag/pol protein [Cucumis melo var. makuwa]3.5e-4675.38Show/hide
Query:  MILVIDDLRFVLIEECPLSPVRNASQIVRDAYDRWTKANEKARIYILSSMSDVLSKKHESMVTARQIMDSFQEMFGQPSIQIQHEAIKYVYNAHMKEGQS
        MILVI DLRFVL+EECP  P +NASQ V+DAYD WTKAN+KA +Y+L+S+SD+LSKKHE MVTARQIMDS +EMFGQPSIQI+ EAIKYVYNA MKEGQS
Subjt:  MILVIDDLRFVLIEECPLSPVRNASQIVRDAYDRWTKANEKARIYILSSMSDVLSKKHESMVTARQIMDSFQEMFGQPSIQIQHEAIKYVYNAHMKEGQS

Query:  VREHVLDMMVQFNVAETNGAVIDEQSQVHF
        VREHVL M+V FNVAE N A+ DE+SQV +
Subjt:  VREHVLDMMVQFNVAETNGAVIDEQSQVHF

TYK21841.1 gag/pol protein [Cucumis melo var. makuwa]2.0e-4674.42Show/hide
Query:  ILVIDDLRFVLIEECPLSPVRNASQIVRDAYDRWTKANEKARIYILSSMSDVLSKKHESMVTARQIMDSFQEMFGQPSIQIQHEAIKYVYNAHMKEGQSV
        ILVI DLRF+L++ECP  P +NASQ V+D YDRWTKAN+KAR+YIL+SMSD+LSKKHE MVTA QIMDS +EMFGQ SIQI+ +AIKYVYNAHMKEGQSV
Subjt:  ILVIDDLRFVLIEECPLSPVRNASQIVRDAYDRWTKANEKARIYILSSMSDVLSKKHESMVTARQIMDSFQEMFGQPSIQIQHEAIKYVYNAHMKEGQSV

Query:  REHVLDMMVQFNVAETNGAVIDEQSQVHF
        R+HV+DM+V FNVAE NG V DE+SQ+ F
Subjt:  REHVLDMMVQFNVAETNGAVIDEQSQVHF

TrEMBL top hitse value%identityAlignment
A0A5A7TJT4 Gag/pol protein1.1e-4574.62Show/hide
Query:  MILVIDDLRFVLIEECPLSPVRNASQIVRDAYDRWTKANEKARIYILSSMSDVLSKKHESMVTARQIMDSFQEMFGQPSIQIQHEAIKYVYNAHMKEGQS
        MILVIDD  FVL+EEC   P +NASQ V+DAYD WTK N+KAR+YIL+SMSD+LSKKHE MVTARQIMDSF+EMFGQPSIQI+ EAIKYVYNA MKEGQS
Subjt:  MILVIDDLRFVLIEECPLSPVRNASQIVRDAYDRWTKANEKARIYILSSMSDVLSKKHESMVTARQIMDSFQEMFGQPSIQIQHEAIKYVYNAHMKEGQS

Query:  VREHVLDMMVQFNVAETNGAVIDEQSQVHF
        V EHVLD+++ FNV E NG V DE+SQV +
Subjt:  VREHVLDMMVQFNVAETNGAVIDEQSQVHF

A0A5A7VA67 Gag/pol protein1.7e-4675.38Show/hide
Query:  MILVIDDLRFVLIEECPLSPVRNASQIVRDAYDRWTKANEKARIYILSSMSDVLSKKHESMVTARQIMDSFQEMFGQPSIQIQHEAIKYVYNAHMKEGQS
        MILVI DLRFVL+EECP  P +NASQ V+DAYD WTKAN+KA +Y+L+S+SD+LSKKHE MVTARQIMDS +EMFGQPSIQI+ EAIKYVYNA MKEGQS
Subjt:  MILVIDDLRFVLIEECPLSPVRNASQIVRDAYDRWTKANEKARIYILSSMSDVLSKKHESMVTARQIMDSFQEMFGQPSIQIQHEAIKYVYNAHMKEGQS

Query:  VREHVLDMMVQFNVAETNGAVIDEQSQVHF
        VREHVL M+V FNVAE N A+ DE+SQV +
Subjt:  VREHVLDMMVQFNVAETNGAVIDEQSQVHF

A0A5D3D0D9 Gag/pol protein1.7e-4675.38Show/hide
Query:  MILVIDDLRFVLIEECPLSPVRNASQIVRDAYDRWTKANEKARIYILSSMSDVLSKKHESMVTARQIMDSFQEMFGQPSIQIQHEAIKYVYNAHMKEGQS
        MILVI DLRFVL+EECP  P +NASQ V+DAYD WTKAN+KA +Y+L+S+SD+LSKKHE MVTARQIMDS +EMFGQPSIQI+ EAIKYVYNA MKEGQS
Subjt:  MILVIDDLRFVLIEECPLSPVRNASQIVRDAYDRWTKANEKARIYILSSMSDVLSKKHESMVTARQIMDSFQEMFGQPSIQIQHEAIKYVYNAHMKEGQS

Query:  VREHVLDMMVQFNVAETNGAVIDEQSQVHF
        VREHVL M+V FNVAE N A+ DE+SQV +
Subjt:  VREHVLDMMVQFNVAETNGAVIDEQSQVHF

A0A5D3DDU7 Gag/pol protein9.9e-4774.42Show/hide
Query:  ILVIDDLRFVLIEECPLSPVRNASQIVRDAYDRWTKANEKARIYILSSMSDVLSKKHESMVTARQIMDSFQEMFGQPSIQIQHEAIKYVYNAHMKEGQSV
        ILVI DLRF+L++ECP  P +NASQ V+D YDRWTKAN+KAR+YIL+SMSD+LSKKHE MVTA QIMDS +EMFGQ SIQI+ +AIKYVYNAHMKEGQSV
Subjt:  ILVIDDLRFVLIEECPLSPVRNASQIVRDAYDRWTKANEKARIYILSSMSDVLSKKHESMVTARQIMDSFQEMFGQPSIQIQHEAIKYVYNAHMKEGQSV

Query:  REHVLDMMVQFNVAETNGAVIDEQSQVHF
        R+HV+DM+V FNVAE NG V DE+SQ+ F
Subjt:  REHVLDMMVQFNVAETNGAVIDEQSQVHF

A0A5D3DZL3 Gag/pol protein1.7e-4674.62Show/hide
Query:  MILVIDDLRFVLIEECPLSPVRNASQIVRDAYDRWTKANEKARIYILSSMSDVLSKKHESMVTARQIMDSFQEMFGQPSIQIQHEAIKYVYNAHMKEGQS
        MILVI DLRFVL+EECP  P +NASQ V+DAYDRWTKAN+KA +YIL+SMSD+LSKKHE MVTARQI DS +EMFGQPSIQI+ EAIKYVYNA MK+GQS
Subjt:  MILVIDDLRFVLIEECPLSPVRNASQIVRDAYDRWTKANEKARIYILSSMSDVLSKKHESMVTARQIMDSFQEMFGQPSIQIQHEAIKYVYNAHMKEGQS

Query:  VREHVLDMMVQFNVAETNGAVIDEQSQVHF
        V+EH+L+M+V FNV + NGAV DE+SQV +
Subjt:  VREHVLDMMVQFNVAETNGAVIDEQSQVHF

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATTCTTGTAATCGATGATCTACGCTTCGTCTTAATTGAGGAATGTCCTCTTTCCCCTGTTCGAAATGCATCCCAGATCGTCAGGGATGCATATGACCGTTGGACAAA
GGCCAATGAAAAGGCCCGAATCTACATCTTGTCCAGTATGTCTGACGTACTGAGCAAGAAACATGAGTCCATGGTCACTGCACGTCAGATCATGGACTCCTTCCAGGAGA
TGTTTGGACAACCGTCCATTCAAATCCAGCACGAGGCTATTAAATACGTTTATAATGCCCATATGAAGGAAGGCCAATCTGTTAGAGAACATGTTCTCGACATGATGGTC
CAATTCAACGTGGCAGAAACGAACGGGGCGGTCATTGACGAGCAAAGTCAGGTACATTTTGGGTCTATAAATAGGGATCTTTAG
mRNA sequenceShow/hide mRNA sequence
ATGATTCTTGTAATCGATGATCTACGCTTCGTCTTAATTGAGGAATGTCCTCTTTCCCCTGTTCGAAATGCATCCCAGATCGTCAGGGATGCATATGACCGTTGGACAAA
GGCCAATGAAAAGGCCCGAATCTACATCTTGTCCAGTATGTCTGACGTACTGAGCAAGAAACATGAGTCCATGGTCACTGCACGTCAGATCATGGACTCCTTCCAGGAGA
TGTTTGGACAACCGTCCATTCAAATCCAGCACGAGGCTATTAAATACGTTTATAATGCCCATATGAAGGAAGGCCAATCTGTTAGAGAACATGTTCTCGACATGATGGTC
CAATTCAACGTGGCAGAAACGAACGGGGCGGTCATTGACGAGCAAAGTCAGGTACATTTTGGGTCTATAAATAGGGATCTTTAG
Protein sequenceShow/hide protein sequence
MILVIDDLRFVLIEECPLSPVRNASQIVRDAYDRWTKANEKARIYILSSMSDVLSKKHESMVTARQIMDSFQEMFGQPSIQIQHEAIKYVYNAHMKEGQSVREHVLDMMV
QFNVAETNGAVIDEQSQVHFGSINRDL