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PI0000205 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0000205
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionPMD domain-containing protein
Genome locationchr06:13753603..13761486
RNA-Seq ExpressionPI0000205
SyntenyPI0000205
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0034815.1 hypothetical protein E6C27_scaffold213G00490 [Cucumis melo var. makuwa]2.3e-5878.79Show/hide
Query:  GKNAWVLQSSIHDEAPNANRVLTLGHRIIEGQTRCGVVTKVPGEFCFTDCYWEWLEFVVGRSGRILYDARLFGVVTTYLYTYDRNNDVVRAFCEAWCPST
        GK+AWVLQSSIH+EAPN++R LTLG R+IEGQTR G VTKVPGEFCFTDCYWEWLE VVGR+ R+LY  RL+G VT  LYTYDRN+DVVRAFCEAWCPST
Subjt:  GKNAWVLQSSIHDEAPNANRVLTLGHRIIEGQTRCGVVTKVPGEFCFTDCYWEWLEFVVGRSGRILYDARLFGVVTTYLYTYDRNNDVVRAFCEAWCPST

Query:  NNLHTMAGEVSISLWDLWSFGGLSIRGNFYRK
        N LHT+AGE+SISLWDLWSFGGL I+G+FY +
Subjt:  NNLHTMAGEVSISLWDLWSFGGLSIRGNFYRK

KAA0047478.1 hypothetical protein E6C27_scaffold498G00950 [Cucumis melo var. makuwa]1.2e-5978.52Show/hide
Query:  MSTGKNAWVLQSSIHDEAPNANRVLTLGHRIIEGQTRCGVVTKVPGEFCFTDCYWEWLEFVVGRSGRILYDARLFGVVTTYLYTYDRNNDVVRAFCEAWC
        +S GK+AWVLQSSIH+EAPN+ R LTLG R+IEGQTR G VTKVPGEFCFTDCYWEWLE VVGR+ R+LY  RL+G VT  LYTYDRN+DVVRAFCEAWC
Subjt:  MSTGKNAWVLQSSIHDEAPNANRVLTLGHRIIEGQTRCGVVTKVPGEFCFTDCYWEWLEFVVGRSGRILYDARLFGVVTTYLYTYDRNNDVVRAFCEAWC

Query:  PSTNNLHTMAGEVSISLWDLWSFGGLSIRGNFYRK
        PSTN LHTMAGE+SISLWDLWSFGGL I+G+FY +
Subjt:  PSTNNLHTMAGEVSISLWDLWSFGGLSIRGNFYRK

KAA0063074.1 uncharacterized protein E6C27_scaffold468G001920 [Cucumis melo var. makuwa]3.4e-6256.64Show/hide
Query:  FLQPRGLATRRMHAQA----YTFGLVHDRRYNSIMTFLDVLLLPSLFWSMIDDATLSWHSSL-TMQLYRDIPWRRASFDIPCSTFFVFLHTMSTGKNAWV
        FL   GL T +++  A       G VHDRR NSIM+    L+  ++ + M  +  LS    L T Q + D PWR               +     K AW+
Subjt:  FLQPRGLATRRMHAQA----YTFGLVHDRRYNSIMTFLDVLLLPSLFWSMIDDATLSWHSSL-TMQLYRDIPWRRASFDIPCSTFFVFLHTMSTGKNAWV

Query:  LQSSIHDEAPNANRVLTLGHRIIEGQTRCGVVTKVPGEFCFTDCYWEWLEFVVGRSGRILYDARLFGVVTTYLYTYDRNNDVVRAFCEAWCPSTNNLHTM
        LQSSIH+EAPN+ R LTLG R+I+GQTR G VTKVPGEFCF DCYWEWLE VVGR+ R+LY  RL+G VT  LYTYDRN+DVVRAFCEAWCPSTN LHTM
Subjt:  LQSSIHDEAPNANRVLTLGHRIIEGQTRCGVVTKVPGEFCFTDCYWEWLEFVVGRSGRILYDARLFGVVTTYLYTYDRNNDVVRAFCEAWCPSTNNLHTM

Query:  AGEVSISLWDLWSFGGLSIRGNFYRK
        AGE+SISLWDLWSFGGL ++G+FY K
Subjt:  AGEVSISLWDLWSFGGLSIRGNFYRK

KAA0065375.1 hypothetical protein E6C27_scaffold17G00370 [Cucumis melo var. makuwa]2.3e-5877.04Show/hide
Query:  MSTGKNAWVLQSSIHDEAPNANRVLTLGHRIIEGQTRCGVVTKVPGEFCFTDCYWEWLEFVVGRSGRILYDARLFGVVTTYLYTYDRNNDVVRAFCEAWC
        +S GK+AW+LQSSIH EAPN+ R LTLG R+IEGQTR G VTKVP EFCFTDCYWEWLE VVGR+ R+LY  RL+G VT  LYTYDRN+DVVRAFCEAWC
Subjt:  MSTGKNAWVLQSSIHDEAPNANRVLTLGHRIIEGQTRCGVVTKVPGEFCFTDCYWEWLEFVVGRSGRILYDARLFGVVTTYLYTYDRNNDVVRAFCEAWC

Query:  PSTNNLHTMAGEVSISLWDLWSFGGLSIRGNFYRK
        PSTN LHTMAGE+SISLWDLWSFGGL I+G+FY +
Subjt:  PSTNNLHTMAGEVSISLWDLWSFGGLSIRGNFYRK

TYK19639.1 hypothetical protein E5676_scaffold242G00260 [Cucumis melo var. makuwa]6.6e-5877.04Show/hide
Query:  MSTGKNAWVLQSSIHDEAPNANRVLTLGHRIIEGQTRCGVVTKVPGEFCFTDCYWEWLEFVVGRSGRILYDARLFGVVTTYLYTYDRNNDVVRAFCEAWC
        +S GK+AWVLQSSIH+EAPN+ R LTLG R+IEGQTR G VTKVPGEFCFTDCYWEWLE VVGR+ R+LY   L+ VVT  LYTYDRN+DVVRAFCEAWC
Subjt:  MSTGKNAWVLQSSIHDEAPNANRVLTLGHRIIEGQTRCGVVTKVPGEFCFTDCYWEWLEFVVGRSGRILYDARLFGVVTTYLYTYDRNNDVVRAFCEAWC

Query:  PSTNNLHTMAGEVSISLWDLWSFGGLSIRGNFYRK
        PSTN LHTMAGE+SISLWDLWSF GL I+G+FY +
Subjt:  PSTNNLHTMAGEVSISLWDLWSFGGLSIRGNFYRK

TrEMBL top hitse value%identityAlignment
A0A5A7T019 PMD domain-containing protein1.1e-5878.79Show/hide
Query:  GKNAWVLQSSIHDEAPNANRVLTLGHRIIEGQTRCGVVTKVPGEFCFTDCYWEWLEFVVGRSGRILYDARLFGVVTTYLYTYDRNNDVVRAFCEAWCPST
        GK+AWVLQSSIH+EAPN++R LTLG R+IEGQTR G VTKVPGEFCFTDCYWEWLE VVGR+ R+LY  RL+G VT  LYTYDRN+DVVRAFCEAWCPST
Subjt:  GKNAWVLQSSIHDEAPNANRVLTLGHRIIEGQTRCGVVTKVPGEFCFTDCYWEWLEFVVGRSGRILYDARLFGVVTTYLYTYDRNNDVVRAFCEAWCPST

Query:  NNLHTMAGEVSISLWDLWSFGGLSIRGNFYRK
        N LHT+AGE+SISLWDLWSFGGL I+G+FY +
Subjt:  NNLHTMAGEVSISLWDLWSFGGLSIRGNFYRK

A0A5A7TX42 Uncharacterized protein5.8e-6078.52Show/hide
Query:  MSTGKNAWVLQSSIHDEAPNANRVLTLGHRIIEGQTRCGVVTKVPGEFCFTDCYWEWLEFVVGRSGRILYDARLFGVVTTYLYTYDRNNDVVRAFCEAWC
        +S GK+AWVLQSSIH+EAPN+ R LTLG R+IEGQTR G VTKVPGEFCFTDCYWEWLE VVGR+ R+LY  RL+G VT  LYTYDRN+DVVRAFCEAWC
Subjt:  MSTGKNAWVLQSSIHDEAPNANRVLTLGHRIIEGQTRCGVVTKVPGEFCFTDCYWEWLEFVVGRSGRILYDARLFGVVTTYLYTYDRNNDVVRAFCEAWC

Query:  PSTNNLHTMAGEVSISLWDLWSFGGLSIRGNFYRK
        PSTN LHTMAGE+SISLWDLWSFGGL I+G+FY +
Subjt:  PSTNNLHTMAGEVSISLWDLWSFGGLSIRGNFYRK

A0A5A7V773 PMD domain-containing protein1.6e-6256.64Show/hide
Query:  FLQPRGLATRRMHAQA----YTFGLVHDRRYNSIMTFLDVLLLPSLFWSMIDDATLSWHSSL-TMQLYRDIPWRRASFDIPCSTFFVFLHTMSTGKNAWV
        FL   GL T +++  A       G VHDRR NSIM+    L+  ++ + M  +  LS    L T Q + D PWR               +     K AW+
Subjt:  FLQPRGLATRRMHAQA----YTFGLVHDRRYNSIMTFLDVLLLPSLFWSMIDDATLSWHSSL-TMQLYRDIPWRRASFDIPCSTFFVFLHTMSTGKNAWV

Query:  LQSSIHDEAPNANRVLTLGHRIIEGQTRCGVVTKVPGEFCFTDCYWEWLEFVVGRSGRILYDARLFGVVTTYLYTYDRNNDVVRAFCEAWCPSTNNLHTM
        LQSSIH+EAPN+ R LTLG R+I+GQTR G VTKVPGEFCF DCYWEWLE VVGR+ R+LY  RL+G VT  LYTYDRN+DVVRAFCEAWCPSTN LHTM
Subjt:  LQSSIHDEAPNANRVLTLGHRIIEGQTRCGVVTKVPGEFCFTDCYWEWLEFVVGRSGRILYDARLFGVVTTYLYTYDRNNDVVRAFCEAWCPSTNNLHTM

Query:  AGEVSISLWDLWSFGGLSIRGNFYRK
        AGE+SISLWDLWSFGGL ++G+FY K
Subjt:  AGEVSISLWDLWSFGGLSIRGNFYRK

A0A5A7VHW8 PMD domain-containing protein1.1e-5877.04Show/hide
Query:  MSTGKNAWVLQSSIHDEAPNANRVLTLGHRIIEGQTRCGVVTKVPGEFCFTDCYWEWLEFVVGRSGRILYDARLFGVVTTYLYTYDRNNDVVRAFCEAWC
        +S GK+AW+LQSSIH EAPN+ R LTLG R+IEGQTR G VTKVP EFCFTDCYWEWLE VVGR+ R+LY  RL+G VT  LYTYDRN+DVVRAFCEAWC
Subjt:  MSTGKNAWVLQSSIHDEAPNANRVLTLGHRIIEGQTRCGVVTKVPGEFCFTDCYWEWLEFVVGRSGRILYDARLFGVVTTYLYTYDRNNDVVRAFCEAWC

Query:  PSTNNLHTMAGEVSISLWDLWSFGGLSIRGNFYRK
        PSTN LHTMAGE+SISLWDLWSFGGL I+G+FY +
Subjt:  PSTNNLHTMAGEVSISLWDLWSFGGLSIRGNFYRK

A0A5D3D2X6 PMD domain-containing protein3.2e-5855.8Show/hide
Query:  GLVHDRRYNSIMT---FLDVLLLPSLFWSMIDDATLSWHSSLTMQLYRDIP-------------------WRRASFDIPCSTFFVFLHTMSTGKNAWVLQ
        G V DRR NSIMT   FLD                 SW   L +   R+ P                   W R   +      FV +  +S GK+AWVLQ
Subjt:  GLVHDRRYNSIMT---FLDVLLLPSLFWSMIDDATLSWHSSLTMQLYRDIP-------------------WRRASFDIPCSTFFVFLHTMSTGKNAWVLQ

Query:  SSIHDEAPNANRVLTLGHRIIEGQTRCGVVTKVPGEFCFTDCYWEWLEFVVGRSGRILYDARLFGVVTTYLYTYDRNNDVVRAFCEAWCPSTNNLHTMAG
        SSIH+EAPN  R LTLG R+IEGQTR G VTKVP EFCFTDCYWEWLE VVGR+ R+LY   L+GVVT  LYTYDRN+DVVRAFCEAWCP TN LHTMA 
Subjt:  SSIHDEAPNANRVLTLGHRIIEGQTRCGVVTKVPGEFCFTDCYWEWLEFVVGRSGRILYDARLFGVVTTYLYTYDRNNDVVRAFCEAWCPSTNNLHTMAG

Query:  EVSISLWDLWSFGGLSIRGNFYRK
        E+SISLWDLWSFGGL I+G+FY +
Subjt:  EVSISLWDLWSFGGLSIRGNFYRK

SwissProt top hitse value%identityAlignment
Q8LLD4 Rab escort protein 14.7e-0666.67Show/hide
Query:  VLRMPVVALLKDKSNEQYKGVQLASEQNIFSQQLVLDSC
        VLRMP+ ALL DK    YKGV+LAS Q IFSQ+L+LD C
Subjt:  VLRMPVVALLKDKSNEQYKGVQLASEQNIFSQQLVLDSC

Arabidopsis top hitse value%identityAlignment
AT1G32120.1 FUNCTIONS IN: molecular_function unknown8.2e-0624.74Show/hide
Query:  EWLEFVVGRSGRILYDARLFGVVTTYLYTYDRNNDVVRAFCEAWCPSTNNLHTMAGEVSISLWDLWSFGGLSIRGNFYRKASLPLKNWSLHAIRQNV
        EW+  +      +   + ++  +    Y   R++D++ A  E WC  TN      GE +++L D+   GGLS+ GN    A  P+K   +  + + +
Subjt:  EWLEFVVGRSGRILYDARLFGVVTTYLYTYDRNNDVVRAFCEAWCPSTNNLHTMAGEVSISLWDLWSFGGLSIRGNFYRKASLPLKNWSLHAIRQNV

AT3G06540.1 Rab escort protein3.3e-0766.67Show/hide
Query:  VLRMPVVALLKDKSNEQYKGVQLASEQNIFSQQLVLDSC
        VLRMP+ ALL DK    YKGV+LAS Q IFSQ+L+LD C
Subjt:  VLRMPVVALLKDKSNEQYKGVQLASEQNIFSQQLVLDSC


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCAGGCCAGATGGATAAGGAAAGCGAATTTTTAATGTTGGTTGTCAACAACAGCGGTCTTCCACTGTTCACGATCTTCTCTCTCGTTTTCGGCTCCCACCTCACGTC
TTCTTCTTCTTCCCTCACTTTTTCGGCTCTCACCTCTTCCTCTTCTTCTTCGTCAGGAGTATCTTTTCAAGATTGTTCCGATTGGCTACTCTGTGGTGGGGAAATCCAGC
CTCCTTTCACAGTACTTCGGATGCCTGTCGTTGCTCTATTAAAGGACAAGAGTAATGAGCAATATAAGGGTGTTCAGTTGGCTTCTGAACAGAACATCTTTAGTCAACAG
TTGGTTCTGGATTCGTGCTTCATGGATATAATATACTGCTACATTGTTTTGATATGCCTGCGTAGAACAAGAACTCTTTTTCTGCAACCTCGAGGCTTAGCAACTAGGCG
CATGCACGCACAAGCCTATACTTTTGGTTTGGTTCATGATAGACGATACAACTCTATCATGACCTTCCTTGACGTCCTGCTGCTTCCTAGTTTGTTTTGGTCCATGATAG
ACGATGCAACTCTATCATGGCATTCATCACTTACGATGCAACTCTATCGCGACATTCCTTGGCGTCGTGCATCCTTTGACATTCCTTGTTCTACATTTTTTGTTTTTTTG
CACACCATGTCGACGGGAAAAAATGCATGGGTCCTTCAATCTTCTATCCATGATGAGGCTCCTAATGCCAATCGAGTCCTTACTCTCGGACATCGCATAATTGAAGGCCA
AACCCGTTGCGGTGTCGTGACTAAAGTCCCAGGAGAATTCTGCTTTACTGACTGTTATTGGGAGTGGCTAGAGTTCGTAGTTGGTCGAAGTGGGCGAATTCTCTACGATG
CTCGTTTATTTGGTGTCGTAACAACTTATTTGTACACATATGATCGTAACAACGATGTGGTTCGAGCATTTTGTGAAGCTTGGTGTCCTTCAACTAATAATCTTCATACC
ATGGCAGGCGAGGTATCCATTTCCTTATGGGACCTGTGGTCATTTGGGGGTCTTTCAATTAGGGGGAATTTCTACAGGAAGGCATCCCTTCCCTTAAAGAATTGGTCTCT
TCACGCGATAAGGCAAAATGTCTCCCGACAACATGTCAATATCTGTTTCTGGCGTATCATTCAATAG
mRNA sequenceShow/hide mRNA sequence
ATGTCAGGCCAGATGGATAAGGAAAGCGAATTTTTAATGTTGGTTGTCAACAACAGCGGTCTTCCACTGTTCACGATCTTCTCTCTCGTTTTCGGCTCCCACCTCACGTC
TTCTTCTTCTTCCCTCACTTTTTCGGCTCTCACCTCTTCCTCTTCTTCTTCGTCAGGAGTATCTTTTCAAGATTGTTCCGATTGGCTACTCTGTGGTGGGGAAATCCAGC
CTCCTTTCACAGTACTTCGGATGCCTGTCGTTGCTCTATTAAAGGACAAGAGTAATGAGCAATATAAGGGTGTTCAGTTGGCTTCTGAACAGAACATCTTTAGTCAACAG
TTGGTTCTGGATTCGTGCTTCATGGATATAATATACTGCTACATTGTTTTGATATGCCTGCGTAGAACAAGAACTCTTTTTCTGCAACCTCGAGGCTTAGCAACTAGGCG
CATGCACGCACAAGCCTATACTTTTGGTTTGGTTCATGATAGACGATACAACTCTATCATGACCTTCCTTGACGTCCTGCTGCTTCCTAGTTTGTTTTGGTCCATGATAG
ACGATGCAACTCTATCATGGCATTCATCACTTACGATGCAACTCTATCGCGACATTCCTTGGCGTCGTGCATCCTTTGACATTCCTTGTTCTACATTTTTTGTTTTTTTG
CACACCATGTCGACGGGAAAAAATGCATGGGTCCTTCAATCTTCTATCCATGATGAGGCTCCTAATGCCAATCGAGTCCTTACTCTCGGACATCGCATAATTGAAGGCCA
AACCCGTTGCGGTGTCGTGACTAAAGTCCCAGGAGAATTCTGCTTTACTGACTGTTATTGGGAGTGGCTAGAGTTCGTAGTTGGTCGAAGTGGGCGAATTCTCTACGATG
CTCGTTTATTTGGTGTCGTAACAACTTATTTGTACACATATGATCGTAACAACGATGTGGTTCGAGCATTTTGTGAAGCTTGGTGTCCTTCAACTAATAATCTTCATACC
ATGGCAGGCGAGGTATCCATTTCCTTATGGGACCTGTGGTCATTTGGGGGTCTTTCAATTAGGGGGAATTTCTACAGGAAGGCATCCCTTCCCTTAAAGAATTGGTCTCT
TCACGCGATAAGGCAAAATGTCTCCCGACAACATGTCAATATCTGTTTCTGGCGTATCATTCAATAG
Protein sequenceShow/hide protein sequence
MSGQMDKESEFLMLVVNNSGLPLFTIFSLVFGSHLTSSSSSLTFSALTSSSSSSSGVSFQDCSDWLLCGGEIQPPFTVLRMPVVALLKDKSNEQYKGVQLASEQNIFSQQ
LVLDSCFMDIIYCYIVLICLRRTRTLFLQPRGLATRRMHAQAYTFGLVHDRRYNSIMTFLDVLLLPSLFWSMIDDATLSWHSSLTMQLYRDIPWRRASFDIPCSTFFVFL
HTMSTGKNAWVLQSSIHDEAPNANRVLTLGHRIIEGQTRCGVVTKVPGEFCFTDCYWEWLEFVVGRSGRILYDARLFGVVTTYLYTYDRNNDVVRAFCEAWCPSTNNLHT
MAGEVSISLWDLWSFGGLSIRGNFYRKASLPLKNWSLHAIRQNVSRQHVNICFWRIIQ