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PI0000234 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0000234
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionGag-pro-like protein
Genome locationchr12:8291151..8291633
RNA-Seq ExpressionPI0000234
SyntenyPI0000234
Gene Ontology termsGO:0006278 - RNA-dependent DNA biosynthetic process (biological process)
GO:0006310 - DNA recombination (biological process)
GO:0015074 - DNA integration (biological process)
GO:0090502 - RNA phosphodiester bond hydrolysis, endonucleolytic (biological process)
GO:0005634 - nucleus (cellular component)
GO:0030430 - host cell cytoplasm (cellular component)
GO:0003723 - RNA binding (molecular function)
GO:0003887 - DNA-directed DNA polymerase activity (molecular function)
GO:0003964 - RNA-directed DNA polymerase activity (molecular function)
GO:0004523 - RNA-DNA hybrid ribonuclease activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0036933.1 uncharacterized protein E6C27_scaffold86G00060 [Cucumis melo var. makuwa]3.1e-6275Show/hide
Query:  MEEAVDEVVKPHRPKIEVMTTRMMKDGRPSLNQSLEMLLKMPNNEGRFGLGYKPSVYDKIRLQEEKKKKRLAKQDMREFDPGLKFIPALYDTFKSAGISY
        ME  VDEV+KPH+ K+EVMTTR+M  G  SLN++LE LLK+P+N+GRFGLGYKPS+YDKIRLQE+KKKKRL K +MREFDP +K IP LYDTFKSAGISY
Subjt:  MEEAVDEVVKPHRPKIEVMTTRMMKDGRPSLNQSLEMLLKMPNNEGRFGLGYKPSVYDKIRLQEEKKKKRLAKQDMREFDPGLKFIPALYDTFKSAGISY

Query:  SSHDSNSKDCLLTKMESLLIAAVVQDTSFEGDTVYACPPDFELNNWDIVDLPTFSREFQE
        SS +S+ KD LLTKMESL +AAV Q+ SFEG+TVYACPPDFELNNWD VDLPTFSR+FQ+
Subjt:  SSHDSNSKDCLLTKMESLLIAAVVQDTSFEGDTVYACPPDFELNNWDIVDLPTFSREFQE

KAA0036947.1 uncharacterized protein E6C27_scaffold86G00270 [Cucumis melo var. makuwa]6.3e-6376.25Show/hide
Query:  MEEAVDEVVKPHRPKIEVMTTRMMKDGRPSLNQSLEMLLKMPNNEGRFGLGYKPSVYDKIRLQEEKKKKRLAKQDMREFDPGLKFIPALYDTFKSAGISY
        ME  VDEV+KPH+ K+EVMTTR+M  G  SLN++LE LLK+P+N+GRFGLGYKPS+YDKIRLQEEKKKKRLAK +MREFDP +K IP LYDTFKSAGISY
Subjt:  MEEAVDEVVKPHRPKIEVMTTRMMKDGRPSLNQSLEMLLKMPNNEGRFGLGYKPSVYDKIRLQEEKKKKRLAKQDMREFDPGLKFIPALYDTFKSAGISY

Query:  SSHDSNSKDCLLTKMESLLIAAVVQDTSFEGDTVYACPPDFELNNWDIVDLPTFSREFQE
        SS +S+ KD LLTKMESL +A V Q+ SFEG+TVYACPPDFELNNWD VDLPTFSR+FQE
Subjt:  SSHDSNSKDCLLTKMESLLIAAVVQDTSFEGDTVYACPPDFELNNWDIVDLPTFSREFQE

KAA0055607.1 Gag-pro-like protein [Cucumis melo var. makuwa]4.8e-6379.22Show/hide
Query:  EVVKPHRPKIEVMTTRMMKDGRPSLNQSLEMLLKMPNNEGRFGLGYKPSVYDKIRLQEEKKKKRLAKQDMREFDPGLKFIPALYDTFKSAGISYSSHDSN
        EV+KPH+ K+EVMTTR+M  G  SLNQ+LE LLK P+N+GRFGLGYKPS+YDKIRLQEEKKKKRLAK +MREFDP +KFIP LYD FKSAGISYSSH+S+
Subjt:  EVVKPHRPKIEVMTTRMMKDGRPSLNQSLEMLLKMPNNEGRFGLGYKPSVYDKIRLQEEKKKKRLAKQDMREFDPGLKFIPALYDTFKSAGISYSSHDSN

Query:  SKDCLLTKMESLLIAAVVQDTSFEGDTVYACPPDFELNNWDIVDLPTFSREFQE
         KD LLTKMESL +AAV Q TSFEG+TVYACPPDFELNNWD VDLPTFSR+FQE
Subjt:  SKDCLLTKMESLLIAAVVQDTSFEGDTVYACPPDFELNNWDIVDLPTFSREFQE

KAA0063218.1 Gag-pro-like protein [Cucumis melo var. makuwa]1.8e-6278.34Show/hide
Query:  AVDEVVKPHRPKIEVMTTRMMKDGRPSLNQSLEMLLKMPNNEGRFGLGYKPSVYDKIRLQEEKKKKRLAKQDMREFDPGLKFIPALYDTFKSAGISYSSH
        AVDEV KPHR K+E+MTTR+M++G  SLNQ+L+ LLK P+N+GRFGLGYKPS+YDKIRLQEE KKKRLAK +MR+FDP LKFIP LYDTFKSA ISYSS+
Subjt:  AVDEVVKPHRPKIEVMTTRMMKDGRPSLNQSLEMLLKMPNNEGRFGLGYKPSVYDKIRLQEEKKKKRLAKQDMREFDPGLKFIPALYDTFKSAGISYSSH

Query:  DSNSKDCLLTKMESLLIAAVVQDTSFEGDTVYACPPDFELNNWDIVDLPTFSREFQE
        +S+ KD LLTKMESLL+AAV Q+ SFEG+ VYACPPDFELNNWDIVDLPTFSREFQE
Subjt:  DSNSKDCLLTKMESLLIAAVVQDTSFEGDTVYACPPDFELNNWDIVDLPTFSREFQE

TYK21788.1 uncharacterized protein E5676_scaffold1721G00440 [Cucumis melo var. makuwa]3.1e-6275Show/hide
Query:  MEEAVDEVVKPHRPKIEVMTTRMMKDGRPSLNQSLEMLLKMPNNEGRFGLGYKPSVYDKIRLQEEKKKKRLAKQDMREFDPGLKFIPALYDTFKSAGISY
        ME  VDEV+KPH+ K+EVMTTR+M  G  SLN++LE LLK+P+N+GRFGLGYKPS+YDKIRLQE+KKKKRLAK +MREFDP +K IP LYD FKSAGISY
Subjt:  MEEAVDEVVKPHRPKIEVMTTRMMKDGRPSLNQSLEMLLKMPNNEGRFGLGYKPSVYDKIRLQEEKKKKRLAKQDMREFDPGLKFIPALYDTFKSAGISY

Query:  SSHDSNSKDCLLTKMESLLIAAVVQDTSFEGDTVYACPPDFELNNWDIVDLPTFSREFQE
        SSH+S+ KD LLTKM SL +AAV Q+ SFEG+TVYACPPDFELNNWD VDLPTFSR+FQ+
Subjt:  SSHDSNSKDCLLTKMESLLIAAVVQDTSFEGDTVYACPPDFELNNWDIVDLPTFSREFQE

TrEMBL top hitse value%identityAlignment
A0A5A7T1W2 Retrotrans_gag domain-containing protein1.5e-6275Show/hide
Query:  MEEAVDEVVKPHRPKIEVMTTRMMKDGRPSLNQSLEMLLKMPNNEGRFGLGYKPSVYDKIRLQEEKKKKRLAKQDMREFDPGLKFIPALYDTFKSAGISY
        ME  VDEV+KPH+ K+EVMTTR+M  G  SLN++LE LLK+P+N+GRFGLGYKPS+YDKIRLQE+KKKKRL K +MREFDP +K IP LYDTFKSAGISY
Subjt:  MEEAVDEVVKPHRPKIEVMTTRMMKDGRPSLNQSLEMLLKMPNNEGRFGLGYKPSVYDKIRLQEEKKKKRLAKQDMREFDPGLKFIPALYDTFKSAGISY

Query:  SSHDSNSKDCLLTKMESLLIAAVVQDTSFEGDTVYACPPDFELNNWDIVDLPTFSREFQE
        SS +S+ KD LLTKMESL +AAV Q+ SFEG+TVYACPPDFELNNWD VDLPTFSR+FQ+
Subjt:  SSHDSNSKDCLLTKMESLLIAAVVQDTSFEGDTVYACPPDFELNNWDIVDLPTFSREFQE

A0A5A7T5W2 Retrotrans_gag domain-containing protein3.0e-6376.25Show/hide
Query:  MEEAVDEVVKPHRPKIEVMTTRMMKDGRPSLNQSLEMLLKMPNNEGRFGLGYKPSVYDKIRLQEEKKKKRLAKQDMREFDPGLKFIPALYDTFKSAGISY
        ME  VDEV+KPH+ K+EVMTTR+M  G  SLN++LE LLK+P+N+GRFGLGYKPS+YDKIRLQEEKKKKRLAK +MREFDP +K IP LYDTFKSAGISY
Subjt:  MEEAVDEVVKPHRPKIEVMTTRMMKDGRPSLNQSLEMLLKMPNNEGRFGLGYKPSVYDKIRLQEEKKKKRLAKQDMREFDPGLKFIPALYDTFKSAGISY

Query:  SSHDSNSKDCLLTKMESLLIAAVVQDTSFEGDTVYACPPDFELNNWDIVDLPTFSREFQE
        SS +S+ KD LLTKMESL +A V Q+ SFEG+TVYACPPDFELNNWD VDLPTFSR+FQE
Subjt:  SSHDSNSKDCLLTKMESLLIAAVVQDTSFEGDTVYACPPDFELNNWDIVDLPTFSREFQE

A0A5A7UM01 Gag-pro-like protein2.3e-6379.22Show/hide
Query:  EVVKPHRPKIEVMTTRMMKDGRPSLNQSLEMLLKMPNNEGRFGLGYKPSVYDKIRLQEEKKKKRLAKQDMREFDPGLKFIPALYDTFKSAGISYSSHDSN
        EV+KPH+ K+EVMTTR+M  G  SLNQ+LE LLK P+N+GRFGLGYKPS+YDKIRLQEEKKKKRLAK +MREFDP +KFIP LYD FKSAGISYSSH+S+
Subjt:  EVVKPHRPKIEVMTTRMMKDGRPSLNQSLEMLLKMPNNEGRFGLGYKPSVYDKIRLQEEKKKKRLAKQDMREFDPGLKFIPALYDTFKSAGISYSSHDSN

Query:  SKDCLLTKMESLLIAAVVQDTSFEGDTVYACPPDFELNNWDIVDLPTFSREFQE
         KD LLTKMESL +AAV Q TSFEG+TVYACPPDFELNNWD VDLPTFSR+FQE
Subjt:  SKDCLLTKMESLLIAAVVQDTSFEGDTVYACPPDFELNNWDIVDLPTFSREFQE

A0A5A7V6I2 Gag-pro-like protein8.8e-6378.34Show/hide
Query:  AVDEVVKPHRPKIEVMTTRMMKDGRPSLNQSLEMLLKMPNNEGRFGLGYKPSVYDKIRLQEEKKKKRLAKQDMREFDPGLKFIPALYDTFKSAGISYSSH
        AVDEV KPHR K+E+MTTR+M++G  SLNQ+L+ LLK P+N+GRFGLGYKPS+YDKIRLQEE KKKRLAK +MR+FDP LKFIP LYDTFKSA ISYSS+
Subjt:  AVDEVVKPHRPKIEVMTTRMMKDGRPSLNQSLEMLLKMPNNEGRFGLGYKPSVYDKIRLQEEKKKKRLAKQDMREFDPGLKFIPALYDTFKSAGISYSSH

Query:  DSNSKDCLLTKMESLLIAAVVQDTSFEGDTVYACPPDFELNNWDIVDLPTFSREFQE
        +S+ KD LLTKMESLL+AAV Q+ SFEG+ VYACPPDFELNNWDIVDLPTFSREFQE
Subjt:  DSNSKDCLLTKMESLLIAAVVQDTSFEGDTVYACPPDFELNNWDIVDLPTFSREFQE

A0A5D3DEB3 Retrotrans_gag domain-containing protein1.5e-6275Show/hide
Query:  MEEAVDEVVKPHRPKIEVMTTRMMKDGRPSLNQSLEMLLKMPNNEGRFGLGYKPSVYDKIRLQEEKKKKRLAKQDMREFDPGLKFIPALYDTFKSAGISY
        ME  VDEV+KPH+ K+EVMTTR+M  G  SLN++LE LLK+P+N+GRFGLGYKPS+YDKIRLQE+KKKKRLAK +MREFDP +K IP LYD FKSAGISY
Subjt:  MEEAVDEVVKPHRPKIEVMTTRMMKDGRPSLNQSLEMLLKMPNNEGRFGLGYKPSVYDKIRLQEEKKKKRLAKQDMREFDPGLKFIPALYDTFKSAGISY

Query:  SSHDSNSKDCLLTKMESLLIAAVVQDTSFEGDTVYACPPDFELNNWDIVDLPTFSREFQE
        SSH+S+ KD LLTKM SL +AAV Q+ SFEG+TVYACPPDFELNNWD VDLPTFSR+FQ+
Subjt:  SSHDSNSKDCLLTKMESLLIAAVVQDTSFEGDTVYACPPDFELNNWDIVDLPTFSREFQE

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGGAGGCTGTAGATGAAGTGGTAAAGCCACACAGGCCCAAAATTGAAGTTATGACCACTAGAATGATGAAAGATGGAAGACCTTCTTTGAATCAAAGCTTAGAGAT
GCTTTTAAAAATGCCAAACAATGAAGGGAGATTTGGTTTGGGCTACAAGCCATCCGTATATGATAAGATTAGACTTCAAGAAGAAAAGAAAAAAAAGCGTTTGGCAAAGC
AAGATATGAGGGAATTTGATCCGGGTCTAAAATTTATACCAGCGTTGTACGATACTTTCAAGAGTGCTGGTATAAGTTACTCATCACATGACTCTAATTCGAAGGATTGT
CTGTTAACGAAGATGGAGAGTTTATTGATTGCAGCAGTGGTACAAGACACATCATTTGAAGGCGACACAGTTTATGCCTGTCCACCTGATTTCGAGCTTAACAATTGGGA
TATTGTAGATCTACCTACATTTTCAAGAGAATTTCAAGAGTAA
mRNA sequenceShow/hide mRNA sequence
ATGGAGGAGGCTGTAGATGAAGTGGTAAAGCCACACAGGCCCAAAATTGAAGTTATGACCACTAGAATGATGAAAGATGGAAGACCTTCTTTGAATCAAAGCTTAGAGAT
GCTTTTAAAAATGCCAAACAATGAAGGGAGATTTGGTTTGGGCTACAAGCCATCCGTATATGATAAGATTAGACTTCAAGAAGAAAAGAAAAAAAAGCGTTTGGCAAAGC
AAGATATGAGGGAATTTGATCCGGGTCTAAAATTTATACCAGCGTTGTACGATACTTTCAAGAGTGCTGGTATAAGTTACTCATCACATGACTCTAATTCGAAGGATTGT
CTGTTAACGAAGATGGAGAGTTTATTGATTGCAGCAGTGGTACAAGACACATCATTTGAAGGCGACACAGTTTATGCCTGTCCACCTGATTTCGAGCTTAACAATTGGGA
TATTGTAGATCTACCTACATTTTCAAGAGAATTTCAAGAGTAA
Protein sequenceShow/hide protein sequence
MEEAVDEVVKPHRPKIEVMTTRMMKDGRPSLNQSLEMLLKMPNNEGRFGLGYKPSVYDKIRLQEEKKKKRLAKQDMREFDPGLKFIPALYDTFKSAGISYSSHDSNSKDC
LLTKMESLLIAAVVQDTSFEGDTVYACPPDFELNNWDIVDLPTFSREFQE