; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

PI0000239 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0000239
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionAlba domain-containing protein
Genome locationchr06:3618499..3619309
RNA-Seq ExpressionPI0000239
SyntenyPI0000239
Gene Ontology termsGO:0005634 - nucleus (cellular component)
GO:0003723 - RNA binding (molecular function)
InterPro domainsIPR002775 - DNA/RNA-binding protein Alba-like
IPR014560 - Uncharacterised conserved protein UCP030333, DNA/RNA-binding Alba-related
IPR036882 - Alba-like domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004134424.1 uncharacterized protein At2g34160 [Cucumis sativus]6.1e-6596.55Show/hide
Query:  MVVSEATLEVKNEIRNEEEKLLVAAPDSEVKEIAVLTEFKKKRNQIQVSNVKKPFFYYYNLSKRHIKQYNEVELSALGMAIPTVVTIAEILKRNGLAFQK
        MVVSEA  EVKNEIRNEEE+LLVAAPDSEVKEIAVLTEFKKKRNQIQVSNVKKPFFYYYNLSKRHIKQYNEVELSALGMAIPTVVTIAEILKRNGLAFQK
Subjt:  MVVSEATLEVKNEIRNEEEKLLVAAPDSEVKEIAVLTEFKKKRNQIQVSNVKKPFFYYYNLSKRHIKQYNEVELSALGMAIPTVVTIAEILKRNGLAFQK

Query:  KLTISSVSLKNGENGKLVMKPKIEIALVNAEKTKNISTAPTSEDS
        KL ISSVSLKNGENGKLVMKPKIEIALVNAEK KNISTAPTSEDS
Subjt:  KLTISSVSLKNGENGKLVMKPKIEIALVNAEKTKNISTAPTSEDS

XP_008438573.1 PREDICTED: uncharacterized protein At2g34160-like [Cucumis melo]1.8e-6496.53Show/hide
Query:  VVSEATLEVKNEIRNEEEKLLVAAPDSEVKEIAVLTEFKKKRNQIQVSNVKKPFFYYYNLSKRHIKQYNEVELSALGMAIPTVVTIAEILKRNGLAFQKK
        VVSEAT EVKNEI+NEEEKLLV APDSEVKEIAVLTEFKKKRNQIQVSNVKKPFFYYYNLSKRHIKQYNEVELSALGMAIPTVVTIAEILKRNGLAFQK 
Subjt:  VVSEATLEVKNEIRNEEEKLLVAAPDSEVKEIAVLTEFKKKRNQIQVSNVKKPFFYYYNLSKRHIKQYNEVELSALGMAIPTVVTIAEILKRNGLAFQKK

Query:  LTISSVSLKNGENGKLVMKPKIEIALVNAEKTKNISTAPTSEDS
        LTISSVSLKNGENGKLVMKPKIEIALVNAEK KNISTAPTSEDS
Subjt:  LTISSVSLKNGENGKLVMKPKIEIALVNAEKTKNISTAPTSEDS

XP_022924600.1 uncharacterized protein At2g34160-like [Cucurbita moschata]2.9e-5989.66Show/hide
Query:  MVVSEATLEVKNEIRNEEEKLLVAAPDSEVKEIAVLTEFKKKRNQIQVSNVKKPFFYYYNLSKRHIKQYNEVELSALGMAIPTVVTIAEILKRNGLAFQK
        MVVSEA  E+KNEIRNEEEKLLV APD EVKEIAVLTE KKKRNQIQVSNVKKPFFYYYNLSKR+IKQYNEVELSALGMAIPTVVTIAEILK+NGLAFQK
Subjt:  MVVSEATLEVKNEIRNEEEKLLVAAPDSEVKEIAVLTEFKKKRNQIQVSNVKKPFFYYYNLSKRHIKQYNEVELSALGMAIPTVVTIAEILKRNGLAFQK

Query:  KLTISSVSLKNGENGKLVMKPKIEIALVNAEKTKNISTAPTSEDS
         LTISSVSLKNGEN +LVMKPKIEIAL+NAEK K ISTA TSEDS
Subjt:  KLTISSVSLKNGENGKLVMKPKIEIALVNAEKTKNISTAPTSEDS

XP_022980835.1 uncharacterized protein At2g34160-like [Cucurbita maxima]4.5e-6091.03Show/hide
Query:  MVVSEATLEVKNEIRNEEEKLLVAAPDSEVKEIAVLTEFKKKRNQIQVSNVKKPFFYYYNLSKRHIKQYNEVELSALGMAIPTVVTIAEILKRNGLAFQK
        MVVSEAT EVKNEIRNEEEKLLV APD EVKEIAVLTE KKKRNQIQVSNVKKPFFYYYNLSKR+IKQYNEVELSALGMAIPTVVTIAEILK+NGLAFQK
Subjt:  MVVSEATLEVKNEIRNEEEKLLVAAPDSEVKEIAVLTEFKKKRNQIQVSNVKKPFFYYYNLSKRHIKQYNEVELSALGMAIPTVVTIAEILKRNGLAFQK

Query:  KLTISSVSLKNGENGKLVMKPKIEIALVNAEKTKNISTAPTSEDS
         LTISSVSLKNGEN +LVMKPKIEIAL+NAEK K ISTA TSEDS
Subjt:  KLTISSVSLKNGENGKLVMKPKIEIALVNAEKTKNISTAPTSEDS

XP_038877187.1 uncharacterized protein At2g34160-like [Benincasa hispida]2.4e-6193.1Show/hide
Query:  MVVSEATLEVKNEIRNEEEKLLVAAPDSEVKEIAVLTEFKKKRNQIQVSNVKKPFFYYYNLSKRHIKQYNEVELSALGMAIPTVVTIAEILKRNGLAFQK
        MVVSE T EVKNEIR+EEEKLLV A D EVKEIAVLTEFKKKRNQIQVSNVKKPFFYYYNLSKRHIKQYNEVELSALGMAIPTVVTIAEILKRNGLAFQK
Subjt:  MVVSEATLEVKNEIRNEEEKLLVAAPDSEVKEIAVLTEFKKKRNQIQVSNVKKPFFYYYNLSKRHIKQYNEVELSALGMAIPTVVTIAEILKRNGLAFQK

Query:  KLTISSVSLKNGENGKLVMKPKIEIALVNAEKTKNISTAPTSEDS
         LTISSVSLK GEN KLVMKPKIEIALVNAEK KNISTAPTSEDS
Subjt:  KLTISSVSLKNGENGKLVMKPKIEIALVNAEKTKNISTAPTSEDS

TrEMBL top hitse value%identityAlignment
A0A0A0L8F8 Alba domain-containing protein2.9e-6596.55Show/hide
Query:  MVVSEATLEVKNEIRNEEEKLLVAAPDSEVKEIAVLTEFKKKRNQIQVSNVKKPFFYYYNLSKRHIKQYNEVELSALGMAIPTVVTIAEILKRNGLAFQK
        MVVSEA  EVKNEIRNEEE+LLVAAPDSEVKEIAVLTEFKKKRNQIQVSNVKKPFFYYYNLSKRHIKQYNEVELSALGMAIPTVVTIAEILKRNGLAFQK
Subjt:  MVVSEATLEVKNEIRNEEEKLLVAAPDSEVKEIAVLTEFKKKRNQIQVSNVKKPFFYYYNLSKRHIKQYNEVELSALGMAIPTVVTIAEILKRNGLAFQK

Query:  KLTISSVSLKNGENGKLVMKPKIEIALVNAEKTKNISTAPTSEDS
        KL ISSVSLKNGENGKLVMKPKIEIALVNAEK KNISTAPTSEDS
Subjt:  KLTISSVSLKNGENGKLVMKPKIEIALVNAEKTKNISTAPTSEDS

A0A1S3AXD3 uncharacterized protein At2g34160-like8.5e-6596.53Show/hide
Query:  VVSEATLEVKNEIRNEEEKLLVAAPDSEVKEIAVLTEFKKKRNQIQVSNVKKPFFYYYNLSKRHIKQYNEVELSALGMAIPTVVTIAEILKRNGLAFQKK
        VVSEAT EVKNEI+NEEEKLLV APDSEVKEIAVLTEFKKKRNQIQVSNVKKPFFYYYNLSKRHIKQYNEVELSALGMAIPTVVTIAEILKRNGLAFQK 
Subjt:  VVSEATLEVKNEIRNEEEKLLVAAPDSEVKEIAVLTEFKKKRNQIQVSNVKKPFFYYYNLSKRHIKQYNEVELSALGMAIPTVVTIAEILKRNGLAFQKK

Query:  LTISSVSLKNGENGKLVMKPKIEIALVNAEKTKNISTAPTSEDS
        LTISSVSLKNGENGKLVMKPKIEIALVNAEK KNISTAPTSEDS
Subjt:  LTISSVSLKNGENGKLVMKPKIEIALVNAEKTKNISTAPTSEDS

A0A5D3CZ81 Alba DNA/RNA-binding protein8.5e-6596.53Show/hide
Query:  VVSEATLEVKNEIRNEEEKLLVAAPDSEVKEIAVLTEFKKKRNQIQVSNVKKPFFYYYNLSKRHIKQYNEVELSALGMAIPTVVTIAEILKRNGLAFQKK
        VVSEAT EVKNEI+NEEEKLLV APDSEVKEIAVLTEFKKKRNQIQVSNVKKPFFYYYNLSKRHIKQYNEVELSALGMAIPTVVTIAEILKRNGLAFQK 
Subjt:  VVSEATLEVKNEIRNEEEKLLVAAPDSEVKEIAVLTEFKKKRNQIQVSNVKKPFFYYYNLSKRHIKQYNEVELSALGMAIPTVVTIAEILKRNGLAFQKK

Query:  LTISSVSLKNGENGKLVMKPKIEIALVNAEKTKNISTAPTSEDS
        LTISSVSLKNGENGKLVMKPKIEIALVNAEK KNISTAPTSEDS
Subjt:  LTISSVSLKNGENGKLVMKPKIEIALVNAEKTKNISTAPTSEDS

A0A6J1EFH1 uncharacterized protein At2g34160-like1.4e-5989.66Show/hide
Query:  MVVSEATLEVKNEIRNEEEKLLVAAPDSEVKEIAVLTEFKKKRNQIQVSNVKKPFFYYYNLSKRHIKQYNEVELSALGMAIPTVVTIAEILKRNGLAFQK
        MVVSEA  E+KNEIRNEEEKLLV APD EVKEIAVLTE KKKRNQIQVSNVKKPFFYYYNLSKR+IKQYNEVELSALGMAIPTVVTIAEILK+NGLAFQK
Subjt:  MVVSEATLEVKNEIRNEEEKLLVAAPDSEVKEIAVLTEFKKKRNQIQVSNVKKPFFYYYNLSKRHIKQYNEVELSALGMAIPTVVTIAEILKRNGLAFQK

Query:  KLTISSVSLKNGENGKLVMKPKIEIALVNAEKTKNISTAPTSEDS
         LTISSVSLKNGEN +LVMKPKIEIAL+NAEK K ISTA TSEDS
Subjt:  KLTISSVSLKNGENGKLVMKPKIEIALVNAEKTKNISTAPTSEDS

A0A6J1IXN8 uncharacterized protein At2g34160-like2.2e-6091.03Show/hide
Query:  MVVSEATLEVKNEIRNEEEKLLVAAPDSEVKEIAVLTEFKKKRNQIQVSNVKKPFFYYYNLSKRHIKQYNEVELSALGMAIPTVVTIAEILKRNGLAFQK
        MVVSEAT EVKNEIRNEEEKLLV APD EVKEIAVLTE KKKRNQIQVSNVKKPFFYYYNLSKR+IKQYNEVELSALGMAIPTVVTIAEILK+NGLAFQK
Subjt:  MVVSEATLEVKNEIRNEEEKLLVAAPDSEVKEIAVLTEFKKKRNQIQVSNVKKPFFYYYNLSKRHIKQYNEVELSALGMAIPTVVTIAEILKRNGLAFQK

Query:  KLTISSVSLKNGENGKLVMKPKIEIALVNAEKTKNISTAPTSEDS
         LTISSVSLKNGEN +LVMKPKIEIAL+NAEK K ISTA TSEDS
Subjt:  KLTISSVSLKNGENGKLVMKPKIEIALVNAEKTKNISTAPTSEDS

SwissProt top hitse value%identityAlignment
O22969 Uncharacterized protein At2g341602.4e-2456.31Show/hide
Query:  KKRNQIQVSNVKKPFFYYYNLSKRHIKQYNEVELSALGMAIPTVVTIAEILKRNGLAFQKKLTISSVSLKNGENGKLVMKPKIEIALVNAEKTKNISTAP
        +K+N+IQVSN KKP F+Y NL+KR+++QYN+VELSALGMAI TVVT+ EILK NG A +KK+  S+V +K+   G+ V K KIEI LV +EK   +  A 
Subjt:  KKRNQIQVSNVKKPFFYYYNLSKRHIKQYNEVELSALGMAIPTVVTIAEILKRNGLAFQKKLTISSVSLKNGENGKLVMKPKIEIALVNAEKTKNISTAP

Query:  TSE
          E
Subjt:  TSE

Arabidopsis top hitse value%identityAlignment
AT1G29250.1 Alba DNA/RNA-binding protein6.5e-2555.34Show/hide
Query:  KKRNQIQVSNVKKPFFYYYNLSKRHIKQYNEVELSALGMAIPTVVTIAEILKRNGLAFQKKLTISSVSLKNGENGKLVMKPKIEIALVNAEKTKNISTAP
        +K+N+IQVSN KKP F+Y NL+KR+++QY +VELSALGMAI TVVT+AEILK NG A +KK+  S+V +K+   G+ V K KIEI L  +EK   +  A 
Subjt:  KKRNQIQVSNVKKPFFYYYNLSKRHIKQYNEVELSALGMAIPTVVTIAEILKRNGLAFQKKLTISSVSLKNGENGKLVMKPKIEIALVNAEKTKNISTAP

Query:  TSE
          E
Subjt:  TSE

AT2G34160.1 Alba DNA/RNA-binding protein1.7e-2556.31Show/hide
Query:  KKRNQIQVSNVKKPFFYYYNLSKRHIKQYNEVELSALGMAIPTVVTIAEILKRNGLAFQKKLTISSVSLKNGENGKLVMKPKIEIALVNAEKTKNISTAP
        +K+N+IQVSN KKP F+Y NL+KR+++QYN+VELSALGMAI TVVT+ EILK NG A +KK+  S+V +K+   G+ V K KIEI LV +EK   +  A 
Subjt:  KKRNQIQVSNVKKPFFYYYNLSKRHIKQYNEVELSALGMAIPTVVTIAEILKRNGLAFQKKLTISSVSLKNGENGKLVMKPKIEIALVNAEKTKNISTAP

Query:  TSE
          E
Subjt:  TSE

AT3G04620.1 Alba DNA/RNA-binding protein1.0e-2556.14Show/hide
Query:  EKLLVAAPDSEVKEIAVLTEFKKKRNQIQVSNVKKPFFYYYNLSKRHIKQYNEVELSALGMAIPTVVTIAEILKRNGLAFQKKLTISSVSLKNGENGKLV
        E+ +V AP +      V T    K+N+IQVSN KKP F+Y NL+KR+I+Q+NEVELSALGMAI TVVTI+EILK NGLA +KK+  S+V +K+   GK+V
Subjt:  EKLLVAAPDSEVKEIAVLTEFKKKRNQIQVSNVKKPFFYYYNLSKRHIKQYNEVELSALGMAIPTVVTIAEILKRNGLAFQKKLTISSVSLKNGENGKLV

Query:  MKPKIEIALVNAEK
         K KIEI L  ++K
Subjt:  MKPKIEIALVNAEK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTCGTTTCAGAAGCCACCCTTGAGGTCAAGAATGAAATCCGCAATGAGGAAGAAAAGCTCCTCGTTGCTGCCCCTGATAGTGAGGTTAAGGAGATTGCTGTTTTGAC
CGAGTTCAAGAAGAAGAGGAATCAAATTCAGGTTTCCAATGTCAAGAAGCCTTTCTTTTACTACTACAATCTTTCTAAGAGGCACATTAAGCAGTACAATGAAGTTGAGC
TTTCTGCATTAGGAATGGCTATACCTACTGTAGTGACGATCGCCGAGATTCTGAAGAGGAATGGGTTGGCATTTCAAAAGAAGTTGACGATATCTTCTGTCAGTTTGAAG
AATGGGGAAAATGGCAAGCTGGTTATGAAACCTAAGATTGAGATTGCATTGGTAAATGCAGAAAAGACCAAGAACATTTCGACTGCTCCAACAAGTGAAGATTCTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGTCGTTTCAGAAGCCACCCTTGAGGTCAAGAATGAAATCCGCAATGAGGAAGAAAAGCTCCTCGTTGCTGCCCCTGATAGTGAGGTTAAGGAGATTGCTGTTTTGAC
CGAGTTCAAGAAGAAGAGGAATCAAATTCAGGTTTCCAATGTCAAGAAGCCTTTCTTTTACTACTACAATCTTTCTAAGAGGCACATTAAGCAGTACAATGAAGTTGAGC
TTTCTGCATTAGGAATGGCTATACCTACTGTAGTGACGATCGCCGAGATTCTGAAGAGGAATGGGTTGGCATTTCAAAAGAAGTTGACGATATCTTCTGTCAGTTTGAAG
AATGGGGAAAATGGCAAGCTGGTTATGAAACCTAAGATTGAGATTGCATTGGTAAATGCAGAAAAGACCAAGAACATTTCGACTGCTCCAACAAGTGAAGATTCTTGA
Protein sequenceShow/hide protein sequence
MVVSEATLEVKNEIRNEEEKLLVAAPDSEVKEIAVLTEFKKKRNQIQVSNVKKPFFYYYNLSKRHIKQYNEVELSALGMAIPTVVTIAEILKRNGLAFQKKLTISSVSLK
NGENGKLVMKPKIEIALVNAEKTKNISTAPTSEDS