CuGenDBv2

Gene ID	PI0000254
Organism	Cucumis metuliferus PI 482460 (Melon (PI 482460) v1)
Description	villin-1
Genome location	chr12:8143115..8143690
RNA-Seq Expression	PI0000254
Synteny	PI0000254
Gene Ontology terms	GO:0051014 - actin filament severing (biological process) GO:0051693 - actin filament capping (biological process) GO:0015629 - actin cytoskeleton (cellular component) GO:0051015 - actin filament binding (molecular function)
InterPro domains	IPR007122 - Villin/Gelsolin IPR030010 - Villin-1-like, plant

Homology

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GenBank top hits

e value

%identity

Alignment

KAA0061837.1 villin-1 [Cucumis melo var. makuwa]

1.3e-22

96.43

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Query:  MVEMINPTWQPVSIREWSEPDLFLEVLDGKSEYQKGKEAKGPIEDPHLFVLNISEG
        MVEMINPTWQPVSIRE SEPDLF EVLDGKSEYQKGKEAKGPIEDPHLFVLNISEG
Subjt:  MVEMINPTWQPVSIREWSEPDLFLEVLDGKSEYQKGKEAKGPIEDPHLFVLNISEG

TYK15419.1 villin-1 [Cucumis melo var. makuwa]

1.3e-22

96.43

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Query:  MVEMINPTWQPVSIREWSEPDLFLEVLDGKSEYQKGKEAKGPIEDPHLFVLNISEG
        MVEMINPTWQPVSIRE SEPDLF EVLDGKSEYQKGKEAKGPIEDPHLFVLNISEG
Subjt:  MVEMINPTWQPVSIREWSEPDLFLEVLDGKSEYQKGKEAKGPIEDPHLFVLNISEG

XP_004143215.1 villin-1 [Cucumis sativus]

1.3e-22

96.43

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Query:  MVEMINPTWQPVSIREWSEPDLFLEVLDGKSEYQKGKEAKGPIEDPHLFVLNISEG
        MVEMINPTWQPVSIRE SEPDLF EVLDGKSEYQKGKEAKGPIEDPHLFVLNISEG
Subjt:  MVEMINPTWQPVSIREWSEPDLFLEVLDGKSEYQKGKEAKGPIEDPHLFVLNISEG

XP_008464046.1 PREDICTED: villin-1 [Cucumis melo]

1.3e-22

96.43

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Query:  MVEMINPTWQPVSIREWSEPDLFLEVLDGKSEYQKGKEAKGPIEDPHLFVLNISEG
        MVEMINPTWQPVSIRE SEPDLF EVLDGKSEYQKGKEAKGPIEDPHLFVLNISEG
Subjt:  MVEMINPTWQPVSIREWSEPDLFLEVLDGKSEYQKGKEAKGPIEDPHLFVLNISEG

XP_038901595.1 villin-1 isoform X2 [Benincasa hispida]

4.1e-21

89.29

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Query:  MVEMINPTWQPVSIREWSEPDLFLEVLDGKSEYQKGKEAKGPIEDPHLFVLNISEG
        MVEMINPTWQPVS+RE SEPDLF E+L GKSEYQKGKE KGPIEDPHLFVLNISEG
Subjt:  MVEMINPTWQPVSIREWSEPDLFLEVLDGKSEYQKGKEAKGPIEDPHLFVLNISEG

TrEMBL top hits

e value

%identity

Alignment

A0A0A0KC54 HP domain-containing protein

6.2e-23

96.43

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Query:  MVEMINPTWQPVSIREWSEPDLFLEVLDGKSEYQKGKEAKGPIEDPHLFVLNISEG
        MVEMINPTWQPVSIRE SEPDLF EVLDGKSEYQKGKEAKGPIEDPHLFVLNISEG
Subjt:  MVEMINPTWQPVSIREWSEPDLFLEVLDGKSEYQKGKEAKGPIEDPHLFVLNISEG

A0A1S3CKK6 villin-1

6.2e-23

96.43

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Query:  MVEMINPTWQPVSIREWSEPDLFLEVLDGKSEYQKGKEAKGPIEDPHLFVLNISEG
        MVEMINPTWQPVSIRE SEPDLF EVLDGKSEYQKGKEAKGPIEDPHLFVLNISEG
Subjt:  MVEMINPTWQPVSIREWSEPDLFLEVLDGKSEYQKGKEAKGPIEDPHLFVLNISEG

A0A5A7V4K5 Villin-1

6.2e-23

96.43

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Query:  MVEMINPTWQPVSIREWSEPDLFLEVLDGKSEYQKGKEAKGPIEDPHLFVLNISEG
        MVEMINPTWQPVSIRE SEPDLF EVLDGKSEYQKGKEAKGPIEDPHLFVLNISEG
Subjt:  MVEMINPTWQPVSIREWSEPDLFLEVLDGKSEYQKGKEAKGPIEDPHLFVLNISEG

A0A5D3CZ09 Villin-1

6.2e-23

96.43

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Query:  MVEMINPTWQPVSIREWSEPDLFLEVLDGKSEYQKGKEAKGPIEDPHLFVLNISEG
        MVEMINPTWQPVSIRE SEPDLF EVLDGKSEYQKGKEAKGPIEDPHLFVLNISEG
Subjt:  MVEMINPTWQPVSIREWSEPDLFLEVLDGKSEYQKGKEAKGPIEDPHLFVLNISEG

A0A6J1D3W7 villin-1

3.4e-21

89.29

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Query:  MVEMINPTWQPVSIREWSEPDLFLEVLDGKSEYQKGKEAKGPIEDPHLFVLNISEG
        MV+MINPTWQPVS+RE SEPDLF E L GKSEYQKGKEAKGPIEDPHLFVLNISEG
Subjt:  MVEMINPTWQPVSIREWSEPDLFLEVLDGKSEYQKGKEAKGPIEDPHLFVLNISEG

SwissProt top hits

e value

%identity

Alignment

B8AY58 Villin-1

6.0e-07

42.86

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Query:  MVEMINPTWQPVSIREWSEPDLFLEVLDGKSEYQKGKEAKGPIEDPHLFVLNISEG
        M++ + P  Q + +RE SEPD F E L G+SEY K K+ K    DPHL+  +  +G
Subjt:  MVEMINPTWQPVSIREWSEPDLFLEVLDGKSEYQKGKEAKGPIEDPHLFVLNISEG

O65570 Villin-4

2.8e-04

43.75

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Query:  VEMINPTWQPVSIREWSEPDLFLEVLDGKSEYQKGKEAKGPIEDPHLF
        +++I P  Q  + +E SE + F E+L GK+EY   K  K P  DPHLF
Subjt:  VEMINPTWQPVSIREWSEPDLFLEVLDGKSEYQKGKEAKGPIEDPHLF

O81643 Villin-1

2.7e-07

46.3

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Query:  MVEMINPTWQPVSIREWSEPDLFLEVLDGKSEYQKGKEAKGPIEDPHLFVLNIS
        M+  ++ + QP+ IRE +E D F  +L GKSEY K KE +  IE+PHLF  + S
Subjt:  MVEMINPTWQPVSIREWSEPDLFLEVLDGKSEYQKGKEAKGPIEDPHLFVLNIS

Q0DKN3 Villin-1

2.3e-06

41.07

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Query:  MVEMINPTWQPVSIREWSEPDLFLEVLDGKSEYQKGKEAKGPIEDPHLFVLNISEG
        M++ + P  Q + +RE SEPD F E L G+SEY + K+ K    DPHL+  +  +G
Subjt:  MVEMINPTWQPVSIREWSEPDLFLEVLDGKSEYQKGKEAKGPIEDPHLFVLNISEG

Q0J716 Villin-5

6.2e-04

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Query:  VEMINPTWQPVSIREWSEPDLFLEVLDGKSEYQKGKEAKGPIEDPHLFVLNISEG
        +++I P  Q  S +E SE D F  +L GKSEY   K  +    DPHLF   + +G
Subjt:  VEMINPTWQPVSIREWSEPDLFLEVLDGKSEYQKGKEAKGPIEDPHLFVLNISEG

Arabidopsis top hits

e value

%identity

Alignment

AT2G29890.1 villin-like 1

1.9e-08

46.3

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Query:  MVEMINPTWQPVSIREWSEPDLFLEVLDGKSEYQKGKEAKGPIEDPHLFVLNIS
        M+  ++ + QP+ IRE +E D F  +L GKSEY K KE +  IE+PHLF  + S
Subjt:  MVEMINPTWQPVSIREWSEPDLFLEVLDGKSEYQKGKEAKGPIEDPHLFVLNIS

AT2G29890.2 villin-like 1

3.8e-09

46.43

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Query:  MVEMINPTWQPVSIREWSEPDLFLEVLDGKSEYQKGKEAKGPIEDPHLFVLNISEG
        M+  ++ + QP+ IRE +E D F  +L GKSEY K KE +  IE+PHLF  + S G
Subjt:  MVEMINPTWQPVSIREWSEPDLFLEVLDGKSEYQKGKEAKGPIEDPHLFVLNISEG

AT2G29890.3 villin-like 1

3.8e-09

46.43

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Query:  MVEMINPTWQPVSIREWSEPDLFLEVLDGKSEYQKGKEAKGPIEDPHLFVLNISEG
        M+  ++ + QP+ IRE +E D F  +L GKSEY K KE +  IE+PHLF  + S G
Subjt:  MVEMINPTWQPVSIREWSEPDLFLEVLDGKSEYQKGKEAKGPIEDPHLFVLNISEG

AT4G30160.1 villin 4

2.0e-05

43.75

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Query:  VEMINPTWQPVSIREWSEPDLFLEVLDGKSEYQKGKEAKGPIEDPHLF
        +++I P  Q  + +E SE + F E+L GK+EY   K  K P  DPHLF
Subjt:  VEMINPTWQPVSIREWSEPDLFLEVLDGKSEYQKGKEAKGPIEDPHLF

AT4G30160.2 villin 4

2.0e-05

43.75

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Query:  VEMINPTWQPVSIREWSEPDLFLEVLDGKSEYQKGKEAKGPIEDPHLF
        +++I P  Q  + +E SE + F E+L GK+EY   K  K P  DPHLF
Subjt:  VEMINPTWQPVSIREWSEPDLFLEVLDGKSEYQKGKEAKGPIEDPHLF

Sequences

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CDS sequence

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ATGGTGGAAATGATAAATCCAACATGGCAACCTGTATCAATCAGGGAATGGAGTGAGCCTGATTTATTCTTGGAAGTACTTGATGGAAAGTCAGAGTATCAAAAGGGAAA
GGAGGCCAAAGGGCCCATTGAAGATCCACATTTATTTGTCTTGAACATCAGCGAAGGTTGGAAAAGGTGGAGATTTAACTCACGATGA

mRNA sequence

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ATGGTGGAAATGATAAATCCAACATGGCAACCTGTATCAATCAGGGAATGGAGTGAGCCTGATTTATTCTTGGAAGTACTTGATGGAAAGTCAGAGTATCAAAAGGGAAA
GGAGGCCAAAGGGCCCATTGAAGATCCACATTTATTTGTCTTGAACATCAGCGAAGGTTGGAAAAGGTGGAGATTTAACTCACGATGA

Protein sequence

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MVEMINPTWQPVSIREWSEPDLFLEVLDGKSEYQKGKEAKGPIEDPHLFVLNISEGWKRWRFNSR

PI0000254 (gene) of Melon (PI 482460) v1 genome