; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

PI0000265 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0000265
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionTy3/gypsy retrotransposon protein
Genome locationchr01:13201316..13202336
RNA-Seq ExpressionPI0000265
SyntenyPI0000265
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0048514.1 peroxidase 64 [Cucumis melo var. makuwa]5.6e-3241.15Show/hide
Query:  MATKQLNERLESIEKEVLGLKEMMLDMKKAFDRMTKDMKESSSYRRRDESGTSDGSVMKLKGKMNESKA--------------QVEAV------------
        MA +Q+ ER+E +EKE+LGLKE ML++KK  DRM  +M+E++SY+RR+ES TS+ S MKLKGK  ES                QVE V            
Subjt:  MATKQLNERLESIEKEVLGLKEMMLDMKKAFDRMTKDMKESSSYRRRDESGTSDGSVMKLKGKMNESKA--------------QVEAV------------

Query:  ----------AGTFDRSK-----------CNNKYSPRHRCKVNEKRELMLFIM--------NENEGELEEGIVVDGEEEIVELKKLEVPIEIEIELRTLM
                  A    R+K            N K S  +   V  K +  +  +         + EG  EE I+   EEEIVELK L+VP   EIEL+T+M
Subjt:  ----------AGTFDRSK-----------CNNKYSPRHRCKVNEKRELMLFIM--------NENEGELEEGIVVDGEEEIVELKKLEVPIEIEIELRTLM

Query:  GFLAKGTMKIRGLTIEAGNDFGVMIGDGTDRRGKGLCRRIKMKLPELTLIADLLAVELER
        GF  KGT+K++G+    G  FGV IGDGT   GK  C+R++++L ELT+I DLLAVEL+R
Subjt:  GFLAKGTMKIRGLTIEAGNDFGVMIGDGTDRRGKGLCRRIKMKLPELTLIADLLAVELER

KAA0054752.1 hypothetical protein E6C27_scaffold437G00300 [Cucumis melo var. makuwa]3.9e-2532.76Show/hide
Query:  MMLDMKKAFDRMTKDMKESSSYRRRDESGTSDGSVMKLKGKM----------------------------------------------------------
        MML++KKA D M  DM+++SSYRRR+ SGTSDG VMK KGK                                                           
Subjt:  MMLDMKKAFDRMTKDMKESSSYRRRDESGTSDGSVMKLKGKM----------------------------------------------------------

Query:  -----------------------------NESKAQVE------AVAGTFDRS-------------KCNNKYSPRHRCKVNEKRELMLFIMNENEGELEEG
                                     N S+A  +       + G + +              +CN KYS  HRCK+ EKRELMLFIMNE EGE E  
Subjt:  -----------------------------NESKAQVE------AVAGTFDRS-------------KCNNKYSPRHRCKVNEKRELMLFIMNENEGELEEG

Query:  IVVDGEEEIVELKKLEVPIEIEIELRTLMGFLAKGTMKIRG-----------------------------LTIEAGNDFGVMIGDGTDRRGKG
        ++++GE+E++ELK LEVP E EI++RT++GF +K TMK++G                             LTIE G  FGV IGDG++RRGKG
Subjt:  IVVDGEEEIVELKKLEVPIEIEIELRTLMGFLAKGTMKIRG-----------------------------LTIEAGNDFGVMIGDGTDRRGKG

TYJ99691.1 hypothetical protein E5676_scaffold562G00860 [Cucumis melo var. makuwa]3.8e-2837.2Show/hide
Query:  MMLDMKKAFDRMTKDMKESSSYRRRDESGTSDGSVMKLKGKM--------------------------------------------NESKAQVE------
        MML++KKA D M  DM+++SSYRRR+ SG S+G VMK KGK                                             N S+A  +      
Subjt:  MMLDMKKAFDRMTKDMKESSSYRRRDESGTSDGSVMKLKGKM--------------------------------------------NESKAQVE------

Query:  AVAGTFDRS-------------KCNNKYSPRHRCKVNEKRELMLFIMNENEGELEEGIVVDGEEEIVELKKLEVPIEIEIELRTLMGFLAKGTMKIRG--
         + G + +              +CN KYS  H CK+ EKRELMLFIMNE EGE E  ++++GE+E++ELK LEVP E EI++RT++GF +K TMK++G  
Subjt:  AVAGTFDRS-------------KCNNKYSPRHRCKVNEKRELMLFIMNENEGELEEGIVVDGEEEIVELKKLEVPIEIEIELRTLMGFLAKGTMKIRG--

Query:  ---------------------------LTIEAGNDFGVMIGDGTDRRGKG
                                   LTIE G  FGV IGDG++RRGKG
Subjt:  ---------------------------LTIEAGNDFGVMIGDGTDRRGKG

TYK23478.1 Retrotransposable element Tf2 [Cucumis melo var. makuwa]7.6e-2938.24Show/hide
Query:  LNERLESIEKEVLGLKEMMLDMKKAFDRMTKDMKESSSYRRRDESGTSDGSVMKLKGKMNESKAQVEAVAGTFDRSK-----------------------
        + ER++  EKE++GLKEMML+MKKA +R+T +MKES SY++R+ESGTSDGS+MKLKGKM E++   E    + D+SK                       
Subjt:  LNERLESIEKEVLGLKEMMLDMKKAFDRMTKDMKESSSYRRRDESGTSDGSVMKLKGKMNESKAQVEAVAGTFDRSK-----------------------

Query:  -------------------------------------------------CNNKYSPRHRCKVNEKRELMLFIMNENEGELEEGIVVDGEEEIVELKKLEV
                                                         CN KYSP H CK  EKRELM FI+NE E   EE    + EE  VELK LE+
Subjt:  -------------------------------------------------CNNKYSPRHRCKVNEKRELMLFIMNENEGELEEGIVVDGEEEIVELKKLEV

Query:  PIEIEIELRTLMGFLAKGTMKIRGLTIEAGNDFGVM-IGDGTDR-RGKGLCRRIKMKLPELTLIADLLAVEL
            EIEL+T+ G  +K  +    +  EAG  +       G DR +GKG+ RR+++KL E  +IAD LAVEL
Subjt:  PIEIEIELRTLMGFLAKGTMKIRGLTIEAGNDFGVM-IGDGTDR-RGKGLCRRIKMKLPELTLIADLLAVEL

XP_031745419.1 uncharacterized protein LOC116405630 [Cucumis sativus]5.6e-2451.22Show/hide
Query:  KCNNKYSPRHRCKVNEKRELMLFIMNENEGELEEGIVVDGEEEIVELKKLEVPIEIEIELRTLMGFLAKGTMKIRG-LTIEAGNDFGVMIGDGTDRRGKG
        +CN KY+P HRCK  EKRELML I+NE E    E    D   E++EL  LE+ ++  IELR + G  +KGTMK++G L+I+ G  FGV IG+     G G
Subjt:  KCNNKYSPRHRCKVNEKRELMLFIMNENEGELEEGIVVDGEEEIVELKKLEVPIEIEIELRTLMGFLAKGTMKIRG-LTIEAGNDFGVMIGDGTDRRGKG

Query:  LCRRIKMKLPELTLIADLLAVEL
        +C+R+K+KL ELT++AD LAVEL
Subjt:  LCRRIKMKLPELTLIADLLAVEL

TrEMBL top hitse value%identityAlignment
A0A5A7TZQ5 Peroxidase 642.7e-3241.15Show/hide
Query:  MATKQLNERLESIEKEVLGLKEMMLDMKKAFDRMTKDMKESSSYRRRDESGTSDGSVMKLKGKMNESKA--------------QVEAV------------
        MA +Q+ ER+E +EKE+LGLKE ML++KK  DRM  +M+E++SY+RR+ES TS+ S MKLKGK  ES                QVE V            
Subjt:  MATKQLNERLESIEKEVLGLKEMMLDMKKAFDRMTKDMKESSSYRRRDESGTSDGSVMKLKGKMNESKA--------------QVEAV------------

Query:  ----------AGTFDRSK-----------CNNKYSPRHRCKVNEKRELMLFIM--------NENEGELEEGIVVDGEEEIVELKKLEVPIEIEIELRTLM
                  A    R+K            N K S  +   V  K +  +  +         + EG  EE I+   EEEIVELK L+VP   EIEL+T+M
Subjt:  ----------AGTFDRSK-----------CNNKYSPRHRCKVNEKRELMLFIM--------NENEGELEEGIVVDGEEEIVELKKLEVPIEIEIELRTLM

Query:  GFLAKGTMKIRGLTIEAGNDFGVMIGDGTDRRGKGLCRRIKMKLPELTLIADLLAVELER
        GF  KGT+K++G+    G  FGV IGDGT   GK  C+R++++L ELT+I DLLAVEL+R
Subjt:  GFLAKGTMKIRGLTIEAGNDFGVMIGDGTDRRGKGLCRRIKMKLPELTLIADLLAVELER

A0A5A7UG23 Chromo domain-containing protein1.9e-2532.76Show/hide
Query:  MMLDMKKAFDRMTKDMKESSSYRRRDESGTSDGSVMKLKGKM----------------------------------------------------------
        MML++KKA D M  DM+++SSYRRR+ SGTSDG VMK KGK                                                           
Subjt:  MMLDMKKAFDRMTKDMKESSSYRRRDESGTSDGSVMKLKGKM----------------------------------------------------------

Query:  -----------------------------NESKAQVE------AVAGTFDRS-------------KCNNKYSPRHRCKVNEKRELMLFIMNENEGELEEG
                                     N S+A  +       + G + +              +CN KYS  HRCK+ EKRELMLFIMNE EGE E  
Subjt:  -----------------------------NESKAQVE------AVAGTFDRS-------------KCNNKYSPRHRCKVNEKRELMLFIMNENEGELEEG

Query:  IVVDGEEEIVELKKLEVPIEIEIELRTLMGFLAKGTMKIRG-----------------------------LTIEAGNDFGVMIGDGTDRRGKG
        ++++GE+E++ELK LEVP E EI++RT++GF +K TMK++G                             LTIE G  FGV IGDG++RRGKG
Subjt:  IVVDGEEEIVELKKLEVPIEIEIELRTLMGFLAKGTMKIRG-----------------------------LTIEAGNDFGVMIGDGTDRRGKG

A0A5D3BB24 Retrotransposon protein6.1e-2443.75Show/hide
Query:  MMLDMKKAFDRMTKDMKESSSYRRRDESGTSDGSVMKLKGKMNESKAQVEA---------------------------VAGTFDRSK-------------
        MMLD+KK  DRM +DM+E+++Y+R++ESGTSDGSVMKLK KM + +   +A                           + G + + +             
Subjt:  MMLDMKKAFDRMTKDMKESSSYRRRDESGTSDGSVMKLKGKMNESKAQVEA---------------------------VAGTFDRSK-------------

Query:  ---------CNNKYSPRHRCKVNEKRELMLFIMNENEGELEEGIVVDGEEEIVELKKLEVPIEIEIELRTLMGFLA
                 CN  YS  HRCKV EKRELMLFI NE EG   EG++V+ EE+IVELK LEVP+E EIEL+T+MGF A
Subjt:  ---------CNNKYSPRHRCKVNEKRELMLFIMNENEGELEEGIVVDGEEEIVELKKLEVPIEIEIELRTLMGFLA

A0A5D3BLT6 Chromo domain-containing protein1.8e-2837.2Show/hide
Query:  MMLDMKKAFDRMTKDMKESSSYRRRDESGTSDGSVMKLKGKM--------------------------------------------NESKAQVE------
        MML++KKA D M  DM+++SSYRRR+ SG S+G VMK KGK                                             N S+A  +      
Subjt:  MMLDMKKAFDRMTKDMKESSSYRRRDESGTSDGSVMKLKGKM--------------------------------------------NESKAQVE------

Query:  AVAGTFDRS-------------KCNNKYSPRHRCKVNEKRELMLFIMNENEGELEEGIVVDGEEEIVELKKLEVPIEIEIELRTLMGFLAKGTMKIRG--
         + G + +              +CN KYS  H CK+ EKRELMLFIMNE EGE E  ++++GE+E++ELK LEVP E EI++RT++GF +K TMK++G  
Subjt:  AVAGTFDRS-------------KCNNKYSPRHRCKVNEKRELMLFIMNENEGELEEGIVVDGEEEIVELKKLEVPIEIEIELRTLMGFLAKGTMKIRG--

Query:  ---------------------------LTIEAGNDFGVMIGDGTDRRGKG
                                   LTIE G  FGV IGDG++RRGKG
Subjt:  ---------------------------LTIEAGNDFGVMIGDGTDRRGKG

A0A5D3DJ34 Retrotransposable element Tf23.7e-2938.24Show/hide
Query:  LNERLESIEKEVLGLKEMMLDMKKAFDRMTKDMKESSSYRRRDESGTSDGSVMKLKGKMNESKAQVEAVAGTFDRSK-----------------------
        + ER++  EKE++GLKEMML+MKKA +R+T +MKES SY++R+ESGTSDGS+MKLKGKM E++   E    + D+SK                       
Subjt:  LNERLESIEKEVLGLKEMMLDMKKAFDRMTKDMKESSSYRRRDESGTSDGSVMKLKGKMNESKAQVEAVAGTFDRSK-----------------------

Query:  -------------------------------------------------CNNKYSPRHRCKVNEKRELMLFIMNENEGELEEGIVVDGEEEIVELKKLEV
                                                         CN KYSP H CK  EKRELM FI+NE E   EE    + EE  VELK LE+
Subjt:  -------------------------------------------------CNNKYSPRHRCKVNEKRELMLFIMNENEGELEEGIVVDGEEEIVELKKLEV

Query:  PIEIEIELRTLMGFLAKGTMKIRGLTIEAGNDFGVM-IGDGTDR-RGKGLCRRIKMKLPELTLIADLLAVEL
            EIEL+T+ G  +K  +    +  EAG  +       G DR +GKG+ RR+++KL E  +IAD LAVEL
Subjt:  PIEIEIELRTLMGFLAKGTMKIRGLTIEAGNDFGVM-IGDGTDR-RGKGLCRRIKMKLPELTLIADLLAVEL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCAACCAAACAACTGAATGAAAGATTGGAAAGTATTGAAAAGGAAGTTTTGGGCCTCAAGGAAATGATGCTGGATATGAAAAAGGCATTCGACCGAATGACCAAAGA
CATGAAAGAAAGTAGTTCCTACCGGAGAAGGGATGAATCAGGTACTTCCGACGGTTCAGTGATGAAACTGAAGGGAAAGATGAACGAATCGAAAGCCCAGGTGGAAGCTG
TAGCAGGAACATTTGACAGAAGCAAATGCAATAATAAGTATTCTCCGAGACACCGCTGTAAAGTTAACGAGAAAAGGGAACTTATGCTCTTTATAATGAATGAAAATGAG
GGCGAATTGGAAGAAGGAATCGTCGTCGATGGAGAGGAAGAAATAGTGGAGTTGAAGAAATTAGAAGTTCCAATAGAAATAGAGATTGAACTGAGGACTTTGATGGGATT
CTTAGCAAAAGGAACAATGAAGATTAGGGGTCTAACTATTGAGGCAGGCAACGATTTTGGAGTAATGATCGGAGATGGAACAGACAGGAGGGGAAAAGGGTTGTGCAGAA
GGATAAAAATGAAGTTACCTGAGCTGACTCTCATTGCGGATTTATTGGCAGTAGAGTTGGAAAGGTAA
mRNA sequenceShow/hide mRNA sequence
ATGGCAACCAAACAACTGAATGAAAGATTGGAAAGTATTGAAAAGGAAGTTTTGGGCCTCAAGGAAATGATGCTGGATATGAAAAAGGCATTCGACCGAATGACCAAAGA
CATGAAAGAAAGTAGTTCCTACCGGAGAAGGGATGAATCAGGTACTTCCGACGGTTCAGTGATGAAACTGAAGGGAAAGATGAACGAATCGAAAGCCCAGGTGGAAGCTG
TAGCAGGAACATTTGACAGAAGCAAATGCAATAATAAGTATTCTCCGAGACACCGCTGTAAAGTTAACGAGAAAAGGGAACTTATGCTCTTTATAATGAATGAAAATGAG
GGCGAATTGGAAGAAGGAATCGTCGTCGATGGAGAGGAAGAAATAGTGGAGTTGAAGAAATTAGAAGTTCCAATAGAAATAGAGATTGAACTGAGGACTTTGATGGGATT
CTTAGCAAAAGGAACAATGAAGATTAGGGGTCTAACTATTGAGGCAGGCAACGATTTTGGAGTAATGATCGGAGATGGAACAGACAGGAGGGGAAAAGGGTTGTGCAGAA
GGATAAAAATGAAGTTACCTGAGCTGACTCTCATTGCGGATTTATTGGCAGTAGAGTTGGAAAGGTAA
Protein sequenceShow/hide protein sequence
MATKQLNERLESIEKEVLGLKEMMLDMKKAFDRMTKDMKESSSYRRRDESGTSDGSVMKLKGKMNESKAQVEAVAGTFDRSKCNNKYSPRHRCKVNEKRELMLFIMNENE
GELEEGIVVDGEEEIVELKKLEVPIEIEIELRTLMGFLAKGTMKIRGLTIEAGNDFGVMIGDGTDRRGKGLCRRIKMKLPELTLIADLLAVELER