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PI0000273 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0000273
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionGag-pol
Genome locationchr04:23027695..23028138
RNA-Seq ExpressionPI0000273
SyntenyPI0000273
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0038296.1 hypothetical protein E6C27_scaffold270G001610 [Cucumis melo var. makuwa]5.5e-1346.32Show/hide
Query:  TLVPDEARHEEVLEELVDDPLPKGKEIAFKEVGETRAPSPPKQTVDQQEVAVEENEDEDFFKFISEAIGKPMMEGLEDIFQNQVDLHKRAMRHEK
        +LVP  +  +EVLE++VDDPL KGK I  K   ET  PSPPK+T  Q + A E ++ +++FKFI    GKPM +G ED+FQ Q +  +  +R +K
Subjt:  TLVPDEARHEEVLEELVDDPLPKGKEIAFKEVGETRAPSPPKQTVDQQEVAVEENEDEDFFKFISEAIGKPMMEGLEDIFQNQVDLHKRAMRHEK

KAA0047757.1 hypothetical protein E6C27_scaffold1059G00180 [Cucumis melo var. makuwa]1.4e-1358.02Show/hide
Query:  GETRAPSPPKQTVDQQEVAVEENEDED-FFKFISEAIGKPMMEGLEDIFQNQVDLHKRAMRHEKQIPNLELKIDN---HHQ
        GET AP P KQ  +QQ+ A  E+++ED +FKFI +  GKP+M+G +D+FQNQVDL +   RHEKQI +LELKIDN   HHQ
Subjt:  GETRAPSPPKQTVDQQEVAVEENEDED-FFKFISEAIGKPMMEGLEDIFQNQVDLHKRAMRHEKQIPNLELKIDN---HHQ

TYK19850.1 hypothetical protein E5676_scaffold811G00610 [Cucumis melo var. makuwa]1.1e-1348.42Show/hide
Query:  TLVPDEARHEEVLEELVDDPLPKGKEIAFKEVGETRAPSPPKQTVDQQEVAVEENEDEDFFKFISEAIGKPMMEGLEDIFQNQVDLHKRAMRHEK
        +LVP  +  +EVLE++VDDPL KGK I  K   ET  PSPPK+T  Q + A E +E +++FKFI    GKPM +G ED+FQ Q +  +  +R EK
Subjt:  TLVPDEARHEEVLEELVDDPLPKGKEIAFKEVGETRAPSPPKQTVDQQEVAVEENEDEDFFKFISEAIGKPMMEGLEDIFQNQVDLHKRAMRHEK

TYK23898.1 gag-pol [Cucumis melo var. makuwa]7.1e-1356.25Show/hide
Query:  EEVLEELVDDPLPKGKEIAFKEVGETRAPSPPKQTVDQQEVAVEENEDED-FFKFISEAIGKPMMEGLEDIFQNQVDLHK
        ++V EE VDD L KGK+IA++++GE   PSP KQT +QQ+    E++DED +FKFIS+  GKPMM+ LEDIFQ Q DL +
Subjt:  EEVLEELVDDPLPKGKEIAFKEVGETRAPSPPKQTVDQQEVAVEENEDED-FFKFISEAIGKPMMEGLEDIFQNQVDLHK

TYK29776.1 hypothetical protein E5676_scaffold2208G00350 [Cucumis melo var. makuwa]6.7e-1135.65Show/hide
Query:  TTLVPDEARHEEVLEELVDDPLPKGKEIAFKEVGETRAPSPPKQ--------TVDQQEVAVEENEDEDFFKFISEAIGKPMMEGLEDIFQNQVDLHKRAM
        TTL      ++ +LE+ +DDPL K K++  ++  +TR PSPPKQ        T  ++ +  ++++DE +FKFI+E + +P+  G ED+FQ Q +L +  +
Subjt:  TTLVPDEARHEEVLEELVDDPLPKGKEIAFKEVGETRAPSPPKQ--------TVDQQEVAVEENEDEDFFKFISEAIGKPMMEGLEDIFQNQVDLHKRAM

Query:  RHEKQIPNLELKIDN
        +++K + +LELK D+
Subjt:  RHEKQIPNLELKIDN

TrEMBL top hitse value%identityAlignment
A0A5A7T7V1 Uncharacterized protein2.6e-1346.32Show/hide
Query:  TLVPDEARHEEVLEELVDDPLPKGKEIAFKEVGETRAPSPPKQTVDQQEVAVEENEDEDFFKFISEAIGKPMMEGLEDIFQNQVDLHKRAMRHEK
        +LVP  +  +EVLE++VDDPL KGK I  K   ET  PSPPK+T  Q + A E ++ +++FKFI    GKPM +G ED+FQ Q +  +  +R +K
Subjt:  TLVPDEARHEEVLEELVDDPLPKGKEIAFKEVGETRAPSPPKQTVDQQEVAVEENEDEDFFKFISEAIGKPMMEGLEDIFQNQVDLHKRAMRHEK

A0A5A7U0L9 Uncharacterized protein7.0e-1458.02Show/hide
Query:  GETRAPSPPKQTVDQQEVAVEENEDED-FFKFISEAIGKPMMEGLEDIFQNQVDLHKRAMRHEKQIPNLELKIDN---HHQ
        GET AP P KQ  +QQ+ A  E+++ED +FKFI +  GKP+M+G +D+FQNQVDL +   RHEKQI +LELKIDN   HHQ
Subjt:  GETRAPSPPKQTVDQQEVAVEENEDED-FFKFISEAIGKPMMEGLEDIFQNQVDLHKRAMRHEKQIPNLELKIDN---HHQ

A0A5D3D8Q5 Uncharacterized protein5.3e-1448.42Show/hide
Query:  TLVPDEARHEEVLEELVDDPLPKGKEIAFKEVGETRAPSPPKQTVDQQEVAVEENEDEDFFKFISEAIGKPMMEGLEDIFQNQVDLHKRAMRHEK
        +LVP  +  +EVLE++VDDPL KGK I  K   ET  PSPPK+T  Q + A E +E +++FKFI    GKPM +G ED+FQ Q +  +  +R EK
Subjt:  TLVPDEARHEEVLEELVDDPLPKGKEIAFKEVGETRAPSPPKQTVDQQEVAVEENEDEDFFKFISEAIGKPMMEGLEDIFQNQVDLHKRAMRHEK

A0A5D3DK59 Gag-pol3.4e-1356.25Show/hide
Query:  EEVLEELVDDPLPKGKEIAFKEVGETRAPSPPKQTVDQQEVAVEENEDED-FFKFISEAIGKPMMEGLEDIFQNQVDLHK
        ++V EE VDD L KGK+IA++++GE   PSP KQT +QQ+    E++DED +FKFIS+  GKPMM+ LEDIFQ Q DL +
Subjt:  EEVLEELVDDPLPKGKEIAFKEVGETRAPSPPKQTVDQQEVAVEENEDED-FFKFISEAIGKPMMEGLEDIFQNQVDLHK

A0A5D3E1H0 Uncharacterized protein3.2e-1135.65Show/hide
Query:  TTLVPDEARHEEVLEELVDDPLPKGKEIAFKEVGETRAPSPPKQ--------TVDQQEVAVEENEDEDFFKFISEAIGKPMMEGLEDIFQNQVDLHKRAM
        TTL      ++ +LE+ +DDPL K K++  ++  +TR PSPPKQ        T  ++ +  ++++DE +FKFI+E + +P+  G ED+FQ Q +L +  +
Subjt:  TTLVPDEARHEEVLEELVDDPLPKGKEIAFKEVGETRAPSPPKQ--------TVDQQEVAVEENEDEDFFKFISEAIGKPMMEGLEDIFQNQVDLHKRAM

Query:  RHEKQIPNLELKIDN
        +++K + +LELK D+
Subjt:  RHEKQIPNLELKIDN

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCATCCAACAAAAATTGTACCAACGACTCTAGTTCCTGATGAGGCGCGACATGAAGAGGTTCTTGAAGAGCTAGTTGATGACCCACTCCCCAAAGGTAAGGAAATAGC
CTTTAAGGAAGTTGGTGAAACGAGAGCTCCTTCGCCGCCAAAGCAAACAGTTGACCAGCAAGAAGTTGCAGTGGAAGAGAATGAAGATGAAGATTTTTTCAAGTTCATCA
GCGAGGCGATTGGAAAGCCAATGATGGAGGGACTTGAAGACATCTTCCAAAACCAAGTCGATCTACACAAACGTGCGATGAGACATGAGAAGCAGATTCCGAACTTGGAG
TTGAAAATTGACAATCATCACCAATTCCAATATGATCAGCTTGCATTTGAAGTTGCGAGCTTGAAGGAACAAAACAAGGCAATGGTGGCATTGATCAAAAAAGCTTCATT
CTAG
mRNA sequenceShow/hide mRNA sequence
ATGCATCCAACAAAAATTGTACCAACGACTCTAGTTCCTGATGAGGCGCGACATGAAGAGGTTCTTGAAGAGCTAGTTGATGACCCACTCCCCAAAGGTAAGGAAATAGC
CTTTAAGGAAGTTGGTGAAACGAGAGCTCCTTCGCCGCCAAAGCAAACAGTTGACCAGCAAGAAGTTGCAGTGGAAGAGAATGAAGATGAAGATTTTTTCAAGTTCATCA
GCGAGGCGATTGGAAAGCCAATGATGGAGGGACTTGAAGACATCTTCCAAAACCAAGTCGATCTACACAAACGTGCGATGAGACATGAGAAGCAGATTCCGAACTTGGAG
TTGAAAATTGACAATCATCACCAATTCCAATATGATCAGCTTGCATTTGAAGTTGCGAGCTTGAAGGAACAAAACAAGGCAATGGTGGCATTGATCAAAAAAGCTTCATT
CTAG
Protein sequenceShow/hide protein sequence
MHPTKIVPTTLVPDEARHEEVLEELVDDPLPKGKEIAFKEVGETRAPSPPKQTVDQQEVAVEENEDEDFFKFISEAIGKPMMEGLEDIFQNQVDLHKRAMRHEKQIPNLE
LKIDNHHQFQYDQLAFEVASLKEQNKAMVALIKKASF