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PI0000290 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0000290
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionRetrotrans_gag domain-containing protein
Genome locationchr07:11089815..11092221
RNA-Seq ExpressionPI0000290
SyntenyPI0000290
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0045193.1 hypothetical protein E6C27_scaffold30G001940 [Cucumis melo var. makuwa]7.8e-2936.94Show/hide
Query:  NAPPPQVAQEPNAAYMAHDLDRPIRSYATPNLYNFNLEIAYPVFGGNARFEIKPIMLQMIQKAGQFGGHPGEDPHEHIRSFYSICASFHMPGISPEELRF
        N     +A E N   +AH+L+ PI  YA+P+LY FNL I YP F GNARF++KP ML MIQ   QFGG+  EDP +HI+S Y +C+SFH+P +S E+L  
Subjt:  NAPPPQVAQEPNAAYMAHDLDRPIRSYATPNLYNFNLEIAYPVFGGNARFEIKPIMLQMIQKAGQFGGHPGEDPHEHIRSFYSICASFHMPGISPEELRF

Query:  TLFPLTLRDKVKRWANALEDGEIKATLDTMASNNEECDENDFDNHRGGRGRSDEGMYKNVVVALQGQMTAMNNLLKSMAISQVNAAGGSAHAANQFDDMG
        T F  TL+D +K+W   LE    +AT   +                       + M+      ++   T + + L  M+ +  N        A + + MG
Subjt:  TLFPLTLRDKVKRWANALEDGEIKATLDTMASNNEECDENDFDNHRGGRGRSDEGMYKNVVVALQGQMTAMNNLLKSMAISQVNAAGGSAHAANQFDDMG

Query:  YVGCGNPHNTDACPLNTETVAF
         VGC  PH T+A   NTE+V +
Subjt:  YVGCGNPHNTDACPLNTETVAF

KAA0062403.1 putative disease resistance RPP13-like protein 1 [Cucumis melo var. makuwa]6.9e-3367.59Show/hide
Query:  NNRNAPPPQVAQEPNAAYMAHDLDRPIRSYATPNLYNFNLEIAYPVFGGNARFEIKPIMLQMIQKAGQFGGHPGEDPHEHIRSFYSICASFHMPGISPEE
        NN+  P  Q AQ  N  Y+A D DRPIRSYA+PNLY+FN  IAYP F  N RFEIK +MLQ+IQ AGQF  HP +DPH++IR+FYSICASFHMPGIS EE
Subjt:  NNRNAPPPQVAQEPNAAYMAHDLDRPIRSYATPNLYNFNLEIAYPVFGGNARFEIKPIMLQMIQKAGQFGGHPGEDPHEHIRSFYSICASFHMPGISPEE

Query:  LRFTLFPL
        LRFT F L
Subjt:  LRFTLFPL

WP_217833177.1 retrotransposon gag domain-containing protein, partial [Synechococcus sp. PCC 7002]1.1e-3050.74Show/hide
Query:  NNRNAPPPQVAQEPNA----------AYMAHDLDRPIRSYATPNLYNFNLEIAYPVFGGNARFEIKPIMLQMIQKAGQFGGHPGEDPHEHIRSFYSICAS
        N   AP   V Q  NA            +AHD +RP+R YA+PNLYNF   I  P F GN RFE+KP+MLQM+Q AGQFGG  GEDPH H++SF  IC++
Subjt:  NNRNAPPPQVAQEPNA----------AYMAHDLDRPIRSYATPNLYNFNLEIAYPVFGGNARFEIKPIMLQMIQKAGQFGGHPGEDPHEHIRSFYSICAS

Query:  FHMPGISPEELRFTLFPLTLRDKVKRWANALEDGEI
        F M G+  + +R TLFP +LRD+ ++WA + E GEI
Subjt:  FHMPGISPEELRFTLFPLTLRDKVKRWANALEDGEI

XP_030497888.1 uncharacterized protein LOC115713544 [Cannabis sativa]1.0e-2832.21Show/hide
Query:  FEIKPIMLQMIQKAGQFGGHPGEDPHEHIRSFYSICASFHMPGISPEELRFTLFPLTLRDKVKRWANALEDGEI------------KATLDT--------
        FE+KP+M QM+Q  GQFGG P EDPH HI SF  +  SF + G+S E LR  LFP +LRD+ + W N L    +            K  LD         
Subjt:  FEIKPIMLQMIQKAGQFGGHPGEDPHEHIRSFYSICASFHMPGISPEELRFTLFPLTLRDKVKRWANALEDGEI------------KATLDT--------

Query:  ------------MASNNEECDENDFDNHRGGRGRSDEGMYKNVVVALQGQMTAMNNLLKSMAISQVNAAGGSAH--AANQFDDMGYVGCGNPHNTDACPL
                    +ASNN +   N     R   G     +  + + AL  QM +M N+LK+M +      GGS    AA Q  ++  V  G+ H  + CP 
Subjt:  ------------MASNNEECDENDFDNHRGGRGRSDEGMYKNVVVALQGQMTAMNNLLKSMAISQVNAAGGSAH--AANQFDDMGYVGCGNPHNTDACPL

Query:  NTET-------------------------------------------------------VAFKNDALLQSQASSIRNLVVQLGQLASDVSGRPHGSLPSN
        N  +                                                          KNDA++QSQ +S++NL +QLGQLA+D+  RP G+LPS+
Subjt:  NTET-------------------------------------------------------VAFKNDALLQSQASSIRNLVVQLGQLASDVSGRPHGSLPSN

Query:  TETPNQAGGSGKEKCHAVTLRSGRNL
        T+ P +    GKE C AV LRSG+ L
Subjt:  TETPNQAGGSGKEKCHAVTLRSGRNL

XP_038889254.1 uncharacterized protein LOC120079150 [Benincasa hispida]3.4e-3236.76Show/hide
Query:  LYNFNLEIAYPVFGGNARFEIKPIMLQMIQKAGQFGGHPGEDPHEHIRSFYSICASFHMPGISPEELRFTLFPLTLRDKVKRWANALEDGEIKATLDTMA
        LY+F+  I YP+  G  RFE+K +MLQM+Q A QFGG  GEDPH H++ F   C SF +PGI+PE +R +LFP +LRD  K+WA++LE  EI        
Subjt:  LYNFNLEIAYPVFGGNARFEIKPIMLQMIQKAGQFGGHPGEDPHEHIRSFYSICASFHMPGISPEELRFTLFPLTLRDKVKRWANALEDGEIKATLDTMA

Query:  SNNEECDENDFDNHRGGRGRSDEGMYKNVVVALQGQMTAMNNLLKSMAISQVNAAGGSAHAANQFDDMGYVGCGNPHNTDACPLNTETVAFKNDALLQSQ
                  ++NH        +  Y                +L  +A                            HN +            NDALL+SQ
Subjt:  SNNEECDENDFDNHRGGRGRSDEGMYKNVVVALQGQMTAMNNLLKSMAISQVNAAGGSAHAANQFDDMGYVGCGNPHNTDACPLNTETVAFKNDALLQSQ

Query:  ASSIRNLVVQLGQLASDVSGRPHGSLPSNTETPNQAGGSGKEKCHAVTLRSGRNLTICDLDSERSNSTSNST
        ASSIRNL +Q+GQ+AS++  RP   LPSNTETP  +  + KE+CHAVTLRSG++L    ++   +N ++  T
Subjt:  ASSIRNLVVQLGQLASDVSGRPHGSLPSNTETPNQAGGSGKEKCHAVTLRSGRNLTICDLDSERSNSTSNST

TrEMBL top hitse value%identityAlignment
A0A5A7TNS8 Uncharacterized protein3.8e-2936.94Show/hide
Query:  NAPPPQVAQEPNAAYMAHDLDRPIRSYATPNLYNFNLEIAYPVFGGNARFEIKPIMLQMIQKAGQFGGHPGEDPHEHIRSFYSICASFHMPGISPEELRF
        N     +A E N   +AH+L+ PI  YA+P+LY FNL I YP F GNARF++KP ML MIQ   QFGG+  EDP +HI+S Y +C+SFH+P +S E+L  
Subjt:  NAPPPQVAQEPNAAYMAHDLDRPIRSYATPNLYNFNLEIAYPVFGGNARFEIKPIMLQMIQKAGQFGGHPGEDPHEHIRSFYSICASFHMPGISPEELRF

Query:  TLFPLTLRDKVKRWANALEDGEIKATLDTMASNNEECDENDFDNHRGGRGRSDEGMYKNVVVALQGQMTAMNNLLKSMAISQVNAAGGSAHAANQFDDMG
        T F  TL+D +K+W   LE    +AT   +                       + M+      ++   T + + L  M+ +  N        A + + MG
Subjt:  TLFPLTLRDKVKRWANALEDGEIKATLDTMASNNEECDENDFDNHRGGRGRSDEGMYKNVVVALQGQMTAMNNLLKSMAISQVNAAGGSAHAANQFDDMG

Query:  YVGCGNPHNTDACPLNTETVAF
         VGC  PH T+A   NTE+V +
Subjt:  YVGCGNPHNTDACPLNTETVAF

A0A5A7UDN8 Uncharacterized protein7.2e-2865.98Show/hide
Query:  NNRNAPPPQVAQEPNAAYMAHDLDRPIRSYATPNLYNFNLEIAYPVFGGNARFEIKPIMLQMIQKAGQFGGHPGEDPHEHIRSFYSICASFHMPGIS
        NN+N P  Q  QE N AY+AHDLD+PI+SYA+PNLY+FN  IAY  FG N  FEIK +ML M Q AGQFGGHP EDP++HIR+FY ICASF+M  IS
Subjt:  NNRNAPPPQVAQEPNAAYMAHDLDRPIRSYATPNLYNFNLEIAYPVFGGNARFEIKPIMLQMIQKAGQFGGHPGEDPHEHIRSFYSICASFHMPGIS

A0A5A7V2U7 Putative disease resistance RPP13-like protein 13.3e-3367.59Show/hide
Query:  NNRNAPPPQVAQEPNAAYMAHDLDRPIRSYATPNLYNFNLEIAYPVFGGNARFEIKPIMLQMIQKAGQFGGHPGEDPHEHIRSFYSICASFHMPGISPEE
        NN+  P  Q AQ  N  Y+A D DRPIRSYA+PNLY+FN  IAYP F  N RFEIK +MLQ+IQ AGQF  HP +DPH++IR+FYSICASFHMPGIS EE
Subjt:  NNRNAPPPQVAQEPNAAYMAHDLDRPIRSYATPNLYNFNLEIAYPVFGGNARFEIKPIMLQMIQKAGQFGGHPGEDPHEHIRSFYSICASFHMPGISPEE

Query:  LRFTLFPL
        LRFT F L
Subjt:  LRFTLFPL

A0A5D3CC26 Uncharacterized protein1.6e-2750Show/hide
Query:  EIKATLDTMASNNEEC------DENDFDNHRGGRGRSDEGMYKNVVVALQGQMTAMNNLLKSMAISQVNAAGGSAHAANQFDDMGYVGCGNPHNTDACPL
        +IK  LDTMASN++E         ND    +G RGR ++G+  +++VALQGQ+  M N+L+SMA+ QVN    S     Q ++MG VGC  PHNT+ACPL
Subjt:  EIKATLDTMASNNEEC------DENDFDNHRGGRGRSDEGMYKNVVVALQGQMTAMNNLLKSMAISQVNAAGGSAHAANQFDDMGYVGCGNPHNTDACPL

Query:  NTETVAF-KND------------ALLQSQASSIRNLVVQLGQLASDVSGRPHGSLPSNTETPNQ
        NTE VA+ KND              + SQASSI+N+ +QLGQL SD S RP  S PSNTETPNQ
Subjt:  NTETVAF-KND------------ALLQSQASSIRNLVVQLGQLASDVSGRPHGSLPSNTETPNQ

A0A5D3D2S0 Uncharacterized protein6.1e-2737.04Show/hide
Query:  EIKATLDTMASNNEECDENDFDNHRGGRGRSDEGMYKNVVVALQGQMTAMNNLLKSMAISQVNAAGGSAHAANQFDDMGYVGCGNPHNTDACPLNTETVA
        +IK TLD + +N++E  ++D       RGR+D GM +NV+VALQGQ+T M  LL+SMA+SQV+A G    A  Q D+M  VGCG PH TDAC LN E  A
Subjt:  EIKATLDTMASNNEECDENDFDNHRGGRGRSDEGMYKNVVVALQGQMTAMNNLLKSMAISQVNAAGGSAHAANQFDDMGYVGCGNPHNTDACPLNTETVA

Query:  F------------------------------------------------------------KNDALLQSQASSIRNLVVQLGQLASDVSGRPHGSLPSNT
        +                                                            + DA +QSQ +SI NL + LGQLA D SGRPHGSLPSN 
Subjt:  F------------------------------------------------------------KNDALLQSQASSIRNLVVQLGQLASDVSGRPHGSLPSNT

Query:  ETPNQAGGSGKEKCHAVTLRSGRNLTICDLDSERSNSTSNSTV
        E PN   G  K K   +  R  ++      D   + STS+  V
Subjt:  ETPNQAGGSGKEKCHAVTLRSGRNLTICDLDSERSNSTSNSTV

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAAAACAATAATAGAAATGCCCCTCCACCGCAAGTTGCCCAAGAACCAAACGCCGCCTACATGGCACATGACTTGGACAGACCGATTAGATCATATGCGACACCCAA
CCTCTACAACTTCAACCTAGAGATCGCTTACCCTGTGTTCGGCGGAAATGCTAGGTTTGAAATCAAGCCTATAATGCTTCAAATGATTCAGAAAGCCGGACAATTTGGCG
GTCACCCTGGAGAAGATCCACACGAGCATATTAGGAGTTTCTACTCTATTTGTGCTTCCTTCCATATGCCAGGCATCTCACCTGAAGAACTGAGATTCACACTTTTCCCG
TTAACTCTGAGGGATAAGGTGAAGAGGTGGGCCAACGCCTTGGAGGATGGCGAGATTAAGGCGACGCTGGACACAATGGCCAGCAATAATGAAGAATGTGATGAAAATGA
TTTCGACAATCACCGAGGAGGACGAGGAAGAAGCGATGAAGGTATGTATAAGAACGTCGTGGTGGCATTGCAGGGACAAATGACTGCGATGAACAATCTACTCAAATCTA
TGGCAATATCGCAAGTCAATGCCGCAGGAGGCTCTGCGCACGCGGCAAACCAGTTTGATGATATGGGATATGTGGGATGCGGCAATCCTCATAATACTGACGCATGCCCA
CTTAACACTGAAACTGTCGCGTTCAAAAATGATGCACTTCTGCAAAGTCAAGCTTCATCAATCCGTAATCTGGTGGTACAATTAGGGCAGCTAGCCAGCGATGTCTCCGG
AAGACCACATGGATCCCTCCCAAGTAATACAGAAACGCCAAATCAAGCGGGGGGATCTGGAAAAGAGAAGTGTCACGCGGTGACACTGCGCAGCGGAAGGAATTTAACCA
TCTGCGATCTAGACTCTGAACGTAGCAACTCCACTTCTAATTCTACTGTCGAGATCGGCAGCTCAATGAAATTTCCTTCTGATGAAAGTTGCAGCGCAATAAAATCCTTC
AGTTGGGATTATTGCAAGGAAGAAGCTTCGATGTTGCTCAACCCTGAAGAATTCTTCGAAGATCCCCATGGAATAGAACCATTGGGTATGTCAACCTGA
mRNA sequenceShow/hide mRNA sequence
ATGGAAAACAATAATAGAAATGCCCCTCCACCGCAAGTTGCCCAAGAACCAAACGCCGCCTACATGGCACATGACTTGGACAGACCGATTAGATCATATGCGACACCCAA
CCTCTACAACTTCAACCTAGAGATCGCTTACCCTGTGTTCGGCGGAAATGCTAGGTTTGAAATCAAGCCTATAATGCTTCAAATGATTCAGAAAGCCGGACAATTTGGCG
GTCACCCTGGAGAAGATCCACACGAGCATATTAGGAGTTTCTACTCTATTTGTGCTTCCTTCCATATGCCAGGCATCTCACCTGAAGAACTGAGATTCACACTTTTCCCG
TTAACTCTGAGGGATAAGGTGAAGAGGTGGGCCAACGCCTTGGAGGATGGCGAGATTAAGGCGACGCTGGACACAATGGCCAGCAATAATGAAGAATGTGATGAAAATGA
TTTCGACAATCACCGAGGAGGACGAGGAAGAAGCGATGAAGGTATGTATAAGAACGTCGTGGTGGCATTGCAGGGACAAATGACTGCGATGAACAATCTACTCAAATCTA
TGGCAATATCGCAAGTCAATGCCGCAGGAGGCTCTGCGCACGCGGCAAACCAGTTTGATGATATGGGATATGTGGGATGCGGCAATCCTCATAATACTGACGCATGCCCA
CTTAACACTGAAACTGTCGCGTTCAAAAATGATGCACTTCTGCAAAGTCAAGCTTCATCAATCCGTAATCTGGTGGTACAATTAGGGCAGCTAGCCAGCGATGTCTCCGG
AAGACCACATGGATCCCTCCCAAGTAATACAGAAACGCCAAATCAAGCGGGGGGATCTGGAAAAGAGAAGTGTCACGCGGTGACACTGCGCAGCGGAAGGAATTTAACCA
TCTGCGATCTAGACTCTGAACGTAGCAACTCCACTTCTAATTCTACTGTCGAGATCGGCAGCTCAATGAAATTTCCTTCTGATGAAAGTTGCAGCGCAATAAAATCCTTC
AGTTGGGATTATTGCAAGGAAGAAGCTTCGATGTTGCTCAACCCTGAAGAATTCTTCGAAGATCCCCATGGAATAGAACCATTGGGTATGTCAACCTGA
Protein sequenceShow/hide protein sequence
MENNNRNAPPPQVAQEPNAAYMAHDLDRPIRSYATPNLYNFNLEIAYPVFGGNARFEIKPIMLQMIQKAGQFGGHPGEDPHEHIRSFYSICASFHMPGISPEELRFTLFP
LTLRDKVKRWANALEDGEIKATLDTMASNNEECDENDFDNHRGGRGRSDEGMYKNVVVALQGQMTAMNNLLKSMAISQVNAAGGSAHAANQFDDMGYVGCGNPHNTDACP
LNTETVAFKNDALLQSQASSIRNLVVQLGQLASDVSGRPHGSLPSNTETPNQAGGSGKEKCHAVTLRSGRNLTICDLDSERSNSTSNSTVEIGSSMKFPSDESCSAIKSF
SWDYCKEEASMLLNPEEFFEDPHGIEPLGMST