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PI0000296 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0000296
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionROTUNDIFOLIA like 6
Genome locationchr06:30577208..30578164
RNA-Seq ExpressionPI0000296
SyntenyPI0000296
Gene Ontology termsGO:0008285 - negative regulation of cell population proliferation (biological process)
GO:0048367 - shoot system development (biological process)
GO:0005886 - plasma membrane (cellular component)
InterPro domainsIPR012552 - DVL


Homology Show/hide homology
GenBank top hitse value%identityAlignment
ABK28375.1 unknown, partial [Arabidopsis thaliana]2.0e-0854.84Show/hide
Query:  MGQCQS----KKENGREE---MESSEAHKFGCMEMIKERKSRFYIARRCLIMLICWHKYDGS
        MGQC S    +++  REE    ES E    GC+ M+KER+SRFYIARRC++ML+CWHKY  S
Subjt:  MGQCQS----KKENGREE---MESSEAHKFGCMEMIKERKSRFYIARRCLIMLICWHKYDGS

NP_001078498.1 ROTUNDIFOLIA like 6 [Arabidopsis thaliana]2.0e-0854.84Show/hide
Query:  MGQCQS----KKENGREE---MESSEAHKFGCMEMIKERKSRFYIARRCLIMLICWHKYDGS
        MGQC S    +++  REE    ES E    GC+ M+KER+SRFYIARRC++ML+CWHKY  S
Subjt:  MGQCQS----KKENGREE---MESSEAHKFGCMEMIKERKSRFYIARRCLIMLICWHKYDGS

XP_002869061.1 uncharacterized protein LOC9303128 [Arabidopsis lyrata subsp. lyrata]4.5e-0856.45Show/hide
Query:  MGQCQS----KKENGREE---MESSEAHKFGCMEMIKERKSRFYIARRCLIMLICWHKYDGS
        MGQC S    +++  REE    ES E +K GC+ M+KER+SRFYIARRC++ML+CWHKY  S
Subjt:  MGQCQS----KKENGREE---MESSEAHKFGCMEMIKERKSRFYIARRCLIMLICWHKYDGS

XP_013665767.1 uncharacterized protein LOC106370269 [Brassica napus]3.4e-0853.97Show/hide
Query:  MGQCQS------KKENGREE--MESSEAHKFGCMEMIKERKSRFYIARRCLIMLICWHKYDGS
        MGQC S      K++ G+EE   ESS     GC+ M+ ER+SRFYIARRC++ML+CWHKY  S
Subjt:  MGQCQS------KKENGREE--MESSEAHKFGCMEMIKERKSRFYIARRCLIMLICWHKYDGS

XP_024005666.1 uncharacterized protein LOC112082279 [Eutrema salsugineum]4.5e-0856.45Show/hide
Query:  MGQCQS----KKENGREE---MESSEAHKFGCMEMIKERKSRFYIARRCLIMLICWHKYDGS
        MGQC S    +++  REE    ES E +K GC+ M+KER+SRFYIARRC++ML+CWHKY  S
Subjt:  MGQCQS----KKENGREE---MESSEAHKFGCMEMIKERKSRFYIARRCLIMLICWHKYDGS

TrEMBL top hitse value%identityAlignment
A0A178V547 RTFL69.7e-0954.84Show/hide
Query:  MGQCQS----KKENGREE---MESSEAHKFGCMEMIKERKSRFYIARRCLIMLICWHKYDGS
        MGQC S    +++  REE    ES E    GC+ M+KER+SRFYIARRC++ML+CWHKY  S
Subjt:  MGQCQS----KKENGREE---MESSEAHKFGCMEMIKERKSRFYIARRCLIMLICWHKYDGS

A0A3P6EM47 Uncharacterized protein2.8e-0850.82Show/hide
Query:  MGQCQS------KKENGREEMESSEAHKFGCMEMIKERKSRFYIARRCLIMLICWHKYDGS
        MGQC S      K++ G E    S     GC+ M+KE++SRFYIARRC++ML+CWHKY  S
Subjt:  MGQCQS------KKENGREEMESSEAHKFGCMEMIKERKSRFYIARRCLIMLICWHKYDGS

A0A3P6FJT1 Uncharacterized protein4.8e-0852.38Show/hide
Query:  MGQCQS--------KKENGREEMESSEAHKFGCMEMIKERKSRFYIARRCLIMLICWHKYDGS
        MGQC S        K+E G  E  S E ++ GC+ M+ ER+SRFYIARRC++ML+CWHKY  S
Subjt:  MGQCQS--------KKENGREEMESSEAHKFGCMEMIKERKSRFYIARRCLIMLICWHKYDGS

A0A6J0MFF9 uncharacterized protein LOC1088424333.7e-0853.12Show/hide
Query:  MGQCQS-------KKENGREE--MESSEAHKFGCMEMIKERKSRFYIARRCLIMLICWHKYDGS
        MGQC S       +K N +EE   ESS     GC+ M+ ER+SRFYIARRC++ML+CWHKY  S
Subjt:  MGQCQS-------KKENGREE--MESSEAHKFGCMEMIKERKSRFYIARRCLIMLICWHKYDGS

D7MC40 Uncharacterized protein2.2e-0856.45Show/hide
Query:  MGQCQS----KKENGREE---MESSEAHKFGCMEMIKERKSRFYIARRCLIMLICWHKYDGS
        MGQC S    +++  REE    ES E +K GC+ M+KER+SRFYIARRC++ML+CWHKY  S
Subjt:  MGQCQS----KKENGREE---MESSEAHKFGCMEMIKERKSRFYIARRCLIMLICWHKYDGS

SwissProt top hitse value%identityAlignment
Q6IM84 Small polypeptide DEVIL 172.6e-1154.84Show/hide
Query:  MGQCQS----KKENGREE---MESSEAHKFGCMEMIKERKSRFYIARRCLIMLICWHKYDGS
        MGQC S    +++  REE    ES E    GC+ M+KER+SRFYIARRC++ML+CWHKY  S
Subjt:  MGQCQS----KKENGREE---MESSEAHKFGCMEMIKERKSRFYIARRCLIMLICWHKYDGS

Q6IM86 Small polypeptide DEVIL 153.7e-0560.71Show/hide
Query:  CMEMIKERKSRFYIARRCLIMLICWHKY
        C ++ KE KSRFYI +RC++ML+CWHK+
Subjt:  CMEMIKERKSRFYIARRCLIMLICWHKY

Q6IM92 Small polypeptide DEVIL 91.1e-0445.28Show/hide
Query:  MGQCQSKKENGREEMESSEAHKFGCMEMIKERKSRFYIARRCLIMLICWHKYD
        + +  SKKE G      S   K+    + KE+K RFYI RRC+ ML+CWHK+D
Subjt:  MGQCQSKKENGREEMESSEAHKFGCMEMIKERKSRFYIARRCLIMLICWHKYD

Q8L7D0 Small polypeptide DEVIL 132.4e-0446Show/hide
Query:  SKKENGREEMESSEAHKFGCMEMIKERKSRFYIARRCLIMLICWHKYDGS
        S+KE  R    SS +       + KE+K+RFYI RRC+ ML+CWHK+  S
Subjt:  SKKENGREEMESSEAHKFGCMEMIKERKSRFYIARRCLIMLICWHKYDGS

Q8LE84 Small polypeptide DEVIL 182.2e-0564.29Show/hide
Query:  CMEMIKERKSRFYIARRCLIMLICWHKY
        C  M KE KSRFYI +RC++ML+CWHK+
Subjt:  CMEMIKERKSRFYIARRCLIMLICWHKY

Arabidopsis top hitse value%identityAlignment
AT1G07490.1 ROTUNDIFOLIA like 37.6e-0645.28Show/hide
Query:  MGQCQSKKENGREEMESSEAHKFGCMEMIKERKSRFYIARRCLIMLICWHKYD
        + +  SKKE G      S   K+    + KE+K RFYI RRC+ ML+CWHK+D
Subjt:  MGQCQSKKENGREEMESSEAHKFGCMEMIKERKSRFYIARRCLIMLICWHKYD

AT2G29125.1 ROTUNDIFOLIA like 21.7e-0546Show/hide
Query:  SKKENGREEMESSEAHKFGCMEMIKERKSRFYIARRCLIMLICWHKYDGS
        S+KE  R    SS +       + KE+K+RFYI RRC+ ML+CWHK+  S
Subjt:  SKKENGREEMESSEAHKFGCMEMIKERKSRFYIARRCLIMLICWHKYDGS

AT3G46613.1 ROTUNDIFOLIA like 42.6e-0660.71Show/hide
Query:  CMEMIKERKSRFYIARRCLIMLICWHKY
        C ++ KE KSRFYI +RC++ML+CWHK+
Subjt:  CMEMIKERKSRFYIARRCLIMLICWHKY

AT4G35783.1 ROTUNDIFOLIA like 61.9e-1254.84Show/hide
Query:  MGQCQS----KKENGREE---MESSEAHKFGCMEMIKERKSRFYIARRCLIMLICWHKYDGS
        MGQC S    +++  REE    ES E    GC+ M+KER+SRFYIARRC++ML+CWHKY  S
Subjt:  MGQCQS----KKENGREE---MESSEAHKFGCMEMIKERKSRFYIARRCLIMLICWHKYDGS

AT5G59510.1 ROTUNDIFOLIA like 51.5e-0664.29Show/hide
Query:  CMEMIKERKSRFYIARRCLIMLICWHKY
        C  M KE KSRFYI +RC++ML+CWHK+
Subjt:  CMEMIKERKSRFYIARRCLIMLICWHKY


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGGCAGTGTCAATCCAAGAAAGAAAATGGCAGAGAAGAGATGGAAAGTTCAGAAGCACACAAGTTTGGATGTATGGAGATGATCAAAGAGAGAAAGTCCAGATTCTA
TATTGCAAGGAGATGTCTCATCATGCTTATTTGCTGGCACAAATATGATGGAAGCTGGTAA
mRNA sequenceShow/hide mRNA sequence
TTTTTGATCTAAAAGAAGAAGAATAAGCTACATGAATATAGTTCTGCTGGTTAAGGAATATATTTTCGACAAAGAAATCAAGGTTTGATCCAGCTCATCTCCACCCTGCA
TGTTTTTGATCTAAAAGAAGAAGAAACGATATCGTACAGAGAAAACGAGCCTGAAGAAGAAAGATCAGGAAATGACAGCTAGAAGAAGAATTGATATCATAAGAGGAAGA
AGAGCTTGAAGAAGCAACACAGCCAAAAGTGCAAAGAAGGCGAGCACGGGTTCGGGTACCTGGATGGTGGTGAAGTGTGAATGGGGCAGTGTCAATCCAAGAAAGAAAAT
GGCAGAGAAGAGATGGAAAGTTCAGAAGCACACAAGTTTGGATGTATGGAGATGATCAAAGAGAGAAAGTCCAGATTCTATATTGCAAGGAGATGTCTCATCATGCTTAT
TTGCTGGCACAAATATGATGGAAGCTGGTAAATTTGGAGAATGGCATGCACCTTCCTTGGAGGCTTTGGTCACAACAGTTACTATAATTTCTTATGTTTGTCTTTGCTTT
GTAAATTCCCTTTTGGATTATCTCTTTTCCACGATAACCCCATTGTATAATCTCTTCAAATCTTTAATTGCAAATAAAATTCCTCTACTCCC
Protein sequenceShow/hide protein sequence
MGQCQSKKENGREEMESSEAHKFGCMEMIKERKSRFYIARRCLIMLICWHKYDGSW