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PI0000317 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0000317
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionTBC1 domain family member 15-like
Genome locationchr01:22070072..22073664
RNA-Seq ExpressionPI0000317
SyntenyPI0000317
Gene Ontology termsNA
InterPro domainsIPR000195 - Rab-GTPase-TBC domain
IPR035969 - Rab-GTPase-TBC domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8646264.1 hypothetical protein Csa_015531 [Cucumis sativus]6.0e-3094.74Show/hide
Query:  VRENFRCSTGTIGVQSQLSTLSQVIKIVDPKLHQHLEELDGGEYLFAFRMLMVLFRREFSFVDSLYLWEMS-AMEF
        +RENFRCSTGTIGVQSQLSTLSQVIKIVDPKLHQHLEELDGGEYLFAFRMLMVLFRREFSFVDSLYLWEM  AME+
Subjt:  VRENFRCSTGTIGVQSQLSTLSQVIKIVDPKLHQHLEELDGGEYLFAFRMLMVLFRREFSFVDSLYLWEMS-AMEF

TYJ96322.1 TBC1 domain family member 15-like [Cucumis melo var. makuwa]4.7e-3597.56Show/hide
Query:  VRENFRCSTGTIGVQSQLSTLSQVIKIVDPKLHQHLEELDGGEYLFAFRMLMVLFRREFSFVDSLYLWEMSAMEFELISSLF
        +RENFRCSTGTIGVQSQLSTLSQVIKIVDPKLHQHLEELDGGEYLFAFRMLMVLFRREFSFVDSLYLWEMSAME ELISSLF
Subjt:  VRENFRCSTGTIGVQSQLSTLSQVIKIVDPKLHQHLEELDGGEYLFAFRMLMVLFRREFSFVDSLYLWEMSAMEFELISSLF

XP_016902206.1 PREDICTED: TBC1 domain family member 15-like [Cucumis melo]6.0e-3094.74Show/hide
Query:  VRENFRCSTGTIGVQSQLSTLSQVIKIVDPKLHQHLEELDGGEYLFAFRMLMVLFRREFSFVDSLYLWEMS-AMEF
        +RENFRCSTGTIGVQSQLSTLSQVIKIVDPKLHQHLEELDGGEYLFAFRMLMVLFRREFSFVDSLYLWEM  AME+
Subjt:  VRENFRCSTGTIGVQSQLSTLSQVIKIVDPKLHQHLEELDGGEYLFAFRMLMVLFRREFSFVDSLYLWEMS-AMEF

XP_023004186.1 TBC1 domain family member 15-like isoform X1 [Cucurbita maxima]6.0e-3094.74Show/hide
Query:  VRENFRCSTGTIGVQSQLSTLSQVIKIVDPKLHQHLEELDGGEYLFAFRMLMVLFRREFSFVDSLYLWEMS-AMEF
        +RENFRCSTGTIGVQSQLSTLSQVIKIVDPKLHQHLEELDGGEYLFAFRMLMVLFRREFSFVDSLYLWEM  AME+
Subjt:  VRENFRCSTGTIGVQSQLSTLSQVIKIVDPKLHQHLEELDGGEYLFAFRMLMVLFRREFSFVDSLYLWEMS-AMEF

XP_031745005.1 LOW QUALITY PROTEIN: TBC1 domain family member 15 [Cucumis sativus]6.0e-3094.74Show/hide
Query:  VRENFRCSTGTIGVQSQLSTLSQVIKIVDPKLHQHLEELDGGEYLFAFRMLMVLFRREFSFVDSLYLWEMS-AMEF
        +RENFRCSTGTIGVQSQLSTLSQVIKIVDPKLHQHLEELDGGEYLFAFRMLMVLFRREFSFVDSLYLWEM  AME+
Subjt:  VRENFRCSTGTIGVQSQLSTLSQVIKIVDPKLHQHLEELDGGEYLFAFRMLMVLFRREFSFVDSLYLWEMS-AMEF

TrEMBL top hitse value%identityAlignment
A0A0A0K4N1 Rab-GAP TBC domain-containing protein2.9e-3094.74Show/hide
Query:  VRENFRCSTGTIGVQSQLSTLSQVIKIVDPKLHQHLEELDGGEYLFAFRMLMVLFRREFSFVDSLYLWEMS-AMEF
        +RENFRCSTGTIGVQSQLSTLSQVIKIVDPKLHQHLEELDGGEYLFAFRMLMVLFRREFSFVDSLYLWEM  AME+
Subjt:  VRENFRCSTGTIGVQSQLSTLSQVIKIVDPKLHQHLEELDGGEYLFAFRMLMVLFRREFSFVDSLYLWEMS-AMEF

A0A1S4E1V3 TBC1 domain family member 15-like2.9e-3094.74Show/hide
Query:  VRENFRCSTGTIGVQSQLSTLSQVIKIVDPKLHQHLEELDGGEYLFAFRMLMVLFRREFSFVDSLYLWEMS-AMEF
        +RENFRCSTGTIGVQSQLSTLSQVIKIVDPKLHQHLEELDGGEYLFAFRMLMVLFRREFSFVDSLYLWEM  AME+
Subjt:  VRENFRCSTGTIGVQSQLSTLSQVIKIVDPKLHQHLEELDGGEYLFAFRMLMVLFRREFSFVDSLYLWEMS-AMEF

A0A5A7SLF0 TBC1 domain family member 15-like2.9e-3094.74Show/hide
Query:  VRENFRCSTGTIGVQSQLSTLSQVIKIVDPKLHQHLEELDGGEYLFAFRMLMVLFRREFSFVDSLYLWEMS-AMEF
        +RENFRCSTGTIGVQSQLSTLSQVIKIVDPKLHQHLEELDGGEYLFAFRMLMVLFRREFSFVDSLYLWEM  AME+
Subjt:  VRENFRCSTGTIGVQSQLSTLSQVIKIVDPKLHQHLEELDGGEYLFAFRMLMVLFRREFSFVDSLYLWEMS-AMEF

A0A5D3B8Z0 TBC1 domain family member 15-like2.3e-3597.56Show/hide
Query:  VRENFRCSTGTIGVQSQLSTLSQVIKIVDPKLHQHLEELDGGEYLFAFRMLMVLFRREFSFVDSLYLWEMSAMEFELISSLF
        +RENFRCSTGTIGVQSQLSTLSQVIKIVDPKLHQHLEELDGGEYLFAFRMLMVLFRREFSFVDSLYLWEMSAME ELISSLF
Subjt:  VRENFRCSTGTIGVQSQLSTLSQVIKIVDPKLHQHLEELDGGEYLFAFRMLMVLFRREFSFVDSLYLWEMSAMEFELISSLF

A0A6J1KRE4 TBC1 domain family member 15-like isoform X12.9e-3094.74Show/hide
Query:  VRENFRCSTGTIGVQSQLSTLSQVIKIVDPKLHQHLEELDGGEYLFAFRMLMVLFRREFSFVDSLYLWEMS-AMEF
        +RENFRCSTGTIGVQSQLSTLSQVIKIVDPKLHQHLEELDGGEYLFAFRMLMVLFRREFSFVDSLYLWEM  AME+
Subjt:  VRENFRCSTGTIGVQSQLSTLSQVIKIVDPKLHQHLEELDGGEYLFAFRMLMVLFRREFSFVDSLYLWEMS-AMEF

SwissProt top hitse value%identityAlignment
P48365 GTPase-activating protein GYP71.9e-0740.35Show/hide
Query:  GVQSQLSTLSQVIKIVDPKLHQHLEELDGGEYLFAFRMLMVLFRREFSFVDSLYLWE
        G+  Q+ TL ++++++ P+L +HL + D G   F FRML+V F+REF   D +++WE
Subjt:  GVQSQLSTLSQVIKIVDPKLHQHLEELDGGEYLFAFRMLMVLFRREFSFVDSLYLWE

Q6FWI1 GTPase-activating protein GYP73.7e-0634.92Show/hide
Query:  GVQSQLSTLSQVIKIVDPKLHQHLEELDGGEYLFAFRMLMVLFRREFSFVDSLYLWEMSAMEF
        G++ Q+  L+ + +++ P+L  HL++ D  +  F FRML+V F+REF++ D   +WE+   +F
Subjt:  GVQSQLSTLSQVIKIVDPKLHQHLEELDGGEYLFAFRMLMVLFRREFSFVDSLYLWEMSAMEF

Q8TC07 TBC1 domain family member 152.2e-0642.25Show/hide
Query:  GVQSQLSTLSQVIKIVDPKLHQHLEELDGGEYLFAFRMLMVLFRREFSFVDSLYLWEMSAMEFELISSLFH
        G+++QL  LS +++++D     +LE  D G   F FR L++ F+REFSF+D L LWE+  M  EL  + FH
Subjt:  GVQSQLSTLSQVIKIVDPKLHQHLEELDGGEYLFAFRMLMVLFRREFSFVDSLYLWEMSAMEFELISSLFH

Q94BY9 Rab GTPase-activating protein 222.7e-0946.38Show/hide
Query:  RENFRCSTGTIGVQSQLSTLSQVIKIVDPKLHQHLEELDGGEYLFAFRMLMVLFRREFSFVDSLYLWEM
        R NFR      G+Q QLS +S++IK  D +L++HLE L   +  F +RM++V+FRRE SF  +L LWE+
Subjt:  RENFRCSTGTIGVQSQLSTLSQVIKIVDPKLHQHLEELDGGEYLFAFRMLMVLFRREFSFVDSLYLWEM

Q9CXF4 TBC1 domain family member 152.8e-0642.25Show/hide
Query:  GVQSQLSTLSQVIKIVDPKLHQHLEELDGGEYLFAFRMLMVLFRREFSFVDSLYLWEMSAMEFELISSLFH
        G+++QL  LS +++++D     +LE  D G   F FR L++ F+REFSF+D L LWE+  M  EL    FH
Subjt:  GVQSQLSTLSQVIKIVDPKLHQHLEELDGGEYLFAFRMLMVLFRREFSFVDSLYLWEMSAMEFELISSLFH

Arabidopsis top hitse value%identityAlignment
AT2G20440.1 Ypt/Rab-GAP domain of gyp1p superfamily protein5.6e-2675Show/hide
Query:  VRENFRCSTGTIGVQSQLSTLSQVIKIVDPKLHQHLEELDGGEYLFAFRMLMVLFRREFSFVDSLYLWE-MSAMEF
        +RENFR +  ++GVQ+QL  LSQVIK VDP+LHQHLE+LDGGEYLFA RMLMVLFRREFSF+D+LYLWE M AME+
Subjt:  VRENFRCSTGTIGVQSQLSTLSQVIKIVDPKLHQHLEELDGGEYLFAFRMLMVLFRREFSFVDSLYLWE-MSAMEF

AT2G20440.2 Ypt/Rab-GAP domain of gyp1p superfamily protein5.6e-2675Show/hide
Query:  VRENFRCSTGTIGVQSQLSTLSQVIKIVDPKLHQHLEELDGGEYLFAFRMLMVLFRREFSFVDSLYLWE-MSAMEF
        +RENFR +  ++GVQ+QL  LSQVIK VDP+LHQHLE+LDGGEYLFA RMLMVLFRREFSF+D+LYLWE M AME+
Subjt:  VRENFRCSTGTIGVQSQLSTLSQVIKIVDPKLHQHLEELDGGEYLFAFRMLMVLFRREFSFVDSLYLWE-MSAMEF

AT4G27100.1 Ypt/Rab-GAP domain of gyp1p superfamily protein1.4e-2162.34Show/hide
Query:  VRENFRCSTGTIGVQSQLSTLSQVIKIVDPKLHQHLEELDGGEYLFAFRMLMVLFRREFSFVDSLYLWEMS-AMEFE
        +R NFR +  ++GV++QL+ LS + ++VDPKLHQHL++L GG+YLFA RMLMV FRREFSF DSLYLWEM  A+E++
Subjt:  VRENFRCSTGTIGVQSQLSTLSQVIKIVDPKLHQHLEELDGGEYLFAFRMLMVLFRREFSFVDSLYLWEMS-AMEFE

AT4G27100.2 Ypt/Rab-GAP domain of gyp1p superfamily protein1.4e-2162.34Show/hide
Query:  VRENFRCSTGTIGVQSQLSTLSQVIKIVDPKLHQHLEELDGGEYLFAFRMLMVLFRREFSFVDSLYLWEMS-AMEFE
        +R NFR +  ++GV++QL+ LS + ++VDPKLHQHL++L GG+YLFA RMLMV FRREFSF DSLYLWEM  A+E++
Subjt:  VRENFRCSTGTIGVQSQLSTLSQVIKIVDPKLHQHLEELDGGEYLFAFRMLMVLFRREFSFVDSLYLWEMS-AMEFE

AT4G28550.1 Ypt/Rab-GAP domain of gyp1p superfamily protein9.5e-2675Show/hide
Query:  VRENFRCSTGTIGVQSQLSTLSQVIKIVDPKLHQHLEELDGGEYLFAFRMLMVLFRREFSFVDSLYLWE-MSAMEF
        +RENFR +  ++GVQ+QL  LSQVIK VDP+LHQHLE+LDGGEYLFA RMLMVLFRREFSF+D+LYLWE M AME+
Subjt:  VRENFRCSTGTIGVQSQLSTLSQVIKIVDPKLHQHLEELDGGEYLFAFRMLMVLFRREFSFVDSLYLWE-MSAMEF


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGAATTACATACAAAGTTATATCATGTAAGACCATGATCGACGTTCTGCCATACGTGAGAGAAAACTTTAGGTGCAGTACTGGTACAATAGGTGTGCAGTCTCAGCT
GAGTACGTTATCACAAGTAATTAAAATTGTTGATCCTAAGCTTCATCAGCATCTTGAGGAGTTAGATGGTGGAGAGTATTTGTTTGCATTTCGGATGTTGATGGTGCTTT
TTCGCAGAGAGTTCTCCTTTGTTGACAGTTTATATCTTTGGGAGATGTCTGCCATGGAGTTTGAACTCATTTCCTCCTTGTTCCATTACCACTTCAACGAAAATAAATTA
AGTGGAGAGGTCCTTAAATCATTCTTCCATAAATCACTGATTTATCCAAGTAGACCTTTCAATCTTAAGGCCTCTAAACTAACCCTAGAAGCCTTGTATTTGACATACAG
TGCTGATCTAAATTCACCATTTCTCCCTGAATTAAGCTCTTCAGGATGGATGCCACTTCCTTATTACCAATTAGACAATCTACAATCTTTACTAGGCTAG
mRNA sequenceShow/hide mRNA sequence
ATGAGAATTACATACAAAGTTATATCATGTAAGACCATGATCGACGTTCTGCCATACGTGAGAGAAAACTTTAGGTGCAGTACTGGTACAATAGGTGTGCAGTCTCAGCT
GAGTACGTTATCACAAGTAATTAAAATTGTTGATCCTAAGCTTCATCAGCATCTTGAGGAGTTAGATGGTGGAGAGTATTTGTTTGCATTTCGGATGTTGATGGTGCTTT
TTCGCAGAGAGTTCTCCTTTGTTGACAGTTTATATCTTTGGGAGATGTCTGCCATGGAGTTTGAACTCATTTCCTCCTTGTTCCATTACCACTTCAACGAAAATAAATTA
AGTGGAGAGGTCCTTAAATCATTCTTCCATAAATCACTGATTTATCCAAGTAGACCTTTCAATCTTAAGGCCTCTAAACTAACCCTAGAAGCCTTGTATTTGACATACAG
TGCTGATCTAAATTCACCATTTCTCCCTGAATTAAGCTCTTCAGGATGGATGCCACTTCCTTATTACCAATTAGACAATCTACAATCTTTACTAGGCTAG
Protein sequenceShow/hide protein sequence
MRITYKVISCKTMIDVLPYVRENFRCSTGTIGVQSQLSTLSQVIKIVDPKLHQHLEELDGGEYLFAFRMLMVLFRREFSFVDSLYLWEMSAMEFELISSLFHYHFNENKL
SGEVLKSFFHKSLIYPSRPFNLKASKLTLEALYLTYSADLNSPFLPELSSSGWMPLPYYQLDNLQSLLG