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PI0000352 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0000352
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionMediator of RNA polymerase II transcription subunit 12-like isoform X1
Genome locationchr08:11581560..11582687
RNA-Seq ExpressionPI0000352
SyntenyPI0000352
Gene Ontology termsGO:0048507 - meristem development (biological process)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0025967.1 mediator of RNA polymerase II transcription subunit 12-like isoform X1 [Cucumis melo var. makuwa]1.6e-5263.07Show/hide
Query:  GALIQQFDKDVAQEYINWYNIITWLYITRSGATLGHLRSNNIKLRDVVDDPQQVLDISNSNERNMEELHYMYDIPI---------SQTDYGSSRTMMSAF
        G  IQQFD DV QEYI+WYN +  LYITRSG  +GHLRSNN +LRDV DD QQVLDI N+NER M+E++ MYD+PI         SQT YGS  TMM   
Subjt:  GALIQQFDKDVAQEYINWYNIITWLYITRSGATLGHLRSNNIKLRDVVDDPQQVLDISNSNERNMEELHYMYDIPI---------SQTDYGSSRTMMSAF

Query:  GLEYYDSEACTRFFYSEIDPSSSYMDVGPSTSYMHAHKRGRGEHNEYLYYEAPVEVSDPQEYQQEPENQNEQEPHR
        G  Y DSE  T ++ + + PSSSYMDVGPSTSYMH H RG GEHN+YLY+EAP  VSD QEY+QEPENQ ++E HR
Subjt:  GLEYYDSEACTRFFYSEIDPSSSYMDVGPSTSYMHAHKRGRGEHNEYLYYEAPVEVSDPQEYQQEPENQNEQEPHR

KAA0025972.1 mediator of RNA polymerase II transcription subunit 12-like isoform X1 [Cucumis melo var. makuwa]3.8e-4655.61Show/hide
Query:  GALIQQFDKDVAQEYINWYNIITWLYITRSGATLGHLRSNNIKLRDVVDDPQQVLDISNSNERNMEELHYMYDIPI------------------------
        G LIQQFD DV QEYI+ YN IT LYIT+ GAT    RSNN +LRDV DD QQVLDI N+N+R+MEE+H MY +PI                        
Subjt:  GALIQQFDKDVAQEYINWYNIITWLYITRSGATLGHLRSNNIKLRDVVDDPQQVLDISNSNERNMEELHYMYDIPI------------------------

Query:  ----------SQTDYGSSRTMMSAFGLEYYDSEACTRFFYSEIDPSSSYMDVGPSTSYMHAHKRGRGEHNEYLYYEAPVEVSDPQEYQQEPENQNEQEPH
                  +QT YGS   MM  FG+ Y D E  T ++ S + PSSSYMDVGPSTSYMH H+   GEHNEYLY+EAP EVSD QEYQQEPENQ E E H
Subjt:  ----------SQTDYGSSRTMMSAFGLEYYDSEACTRFFYSEIDPSSSYMDVGPSTSYMHAHKRGRGEHNEYLYYEAPVEVSDPQEYQQEPENQNEQEPH

Query:  RFQSR
        R QSR
Subjt:  RFQSR

KAA0054357.1 serine/threonine-protein phosphatase 7 long form-like protein [Cucumis melo var. makuwa]1.5e-5566.67Show/hide
Query:  GALIQQFDKDVAQEYINWYNIITWLYITRSGATLGHLRSNNIKLRDVVDDPQQVLDISNSNERNMEELHYMYDIPISQTDYGSSRTMMSAFGLEYYDSEA
        G  IQQFD DV QEYI+ YN IT LYITR G  +GHLRSNN +LRDVVD PQQVLDI N+NE+ MEE+H MYD+PISQT YGS  T+M  FG  Y DS+ 
Subjt:  GALIQQFDKDVAQEYINWYNIITWLYITRSGATLGHLRSNNIKLRDVVDDPQQVLDISNSNERNMEELHYMYDIPISQTDYGSSRTMMSAFGLEYYDSEA

Query:  CTRFFYSEIDPSSSYMDVGPSTSYMHAHKRGRGEHNEYLYYEAPVEVSDPQEYQQEPENQNEQEPHRFQSR
         T ++ + + PSS YMDVGPS SYMH H RG GEHN+YLY+EAP +VSD QEYQQEPENQ ++E HR QSR
Subjt:  CTRFFYSEIDPSSSYMDVGPSTSYMHAHKRGRGEHNEYLYYEAPVEVSDPQEYQQEPENQNEQEPHRFQSR

KAA0062642.1 mediator of RNA polymerase II transcription subunit 12-like isoform X1 [Cucumis melo var. makuwa]3.8e-5456.88Show/hide
Query:  IQQFDKDVAQEYINWYNIITWLYITRSGATLGHLRSNNIKLRDVVDDPQQVLDISNSNERNMEELHYMYDIPI---------------------------
        IQQFDKDV QEYI+WY+ IT LYITR GA +G  RSNN +LRDV DD QQ LDI N+NER MEE+H MYD+PI                           
Subjt:  IQQFDKDVAQEYINWYNIITWLYITRSGATLGHLRSNNIKLRDVVDDPQQVLDISNSNERNMEELHYMYDIPI---------------------------

Query:  -------SQTDYGSSRTMMSAFGLEYYDSEACTRFFYSEIDPSSSYMDVGPSTSYMHAHKRGRGEHNEYLYYEAPVEVSDPQEYQQEPENQNEQEPHRFQ
               SQT YGS  TMM  F   Y D E    ++ + + PSSSY+DV PSTSYMH H RG GEHNEYLY+EAP +VSD QEYQQEPENQ ++E HR Q
Subjt:  -------SQTDYGSSRTMMSAFGLEYYDSEACTRFFYSEIDPSSSYMDVGPSTSYMHAHKRGRGEHNEYLYYEAPVEVSDPQEYQQEPENQNEQEPHRFQ

Query:  SRGQQPTRNRRRSGCWTH
        SR +QPTRNRRR GC TH
Subjt:  SRGQQPTRNRRRSGCWTH

TYK23842.1 serine/threonine-protein phosphatase 7 long form-like protein [Cucumis melo var. makuwa]1.5e-5556.88Show/hide
Query:  IQQFDKDVAQEYINWYNIITWLYITRSGATLGHLRSNNIKLRDVVDDPQQVLDISNSNERNMEELHYMYDIPI---------------------------
        IQQFD DV QEYI+ YN IT LYITR GA +GHLRSNN +LRDVV+DPQQVLDI N+NER ME++H +YD+PI                           
Subjt:  IQQFDKDVAQEYINWYNIITWLYITRSGATLGHLRSNNIKLRDVVDDPQQVLDISNSNERNMEELHYMYDIPI---------------------------

Query:  -------SQTDYGSSRTMMSAFGLEYYDSEACTRFFYSEIDPSSSYMDVGPSTSYMHAHKRGRGEHNEYLYYEAPVEVSDPQEYQQEPENQNEQEPHRFQ
               SQT YGS  TMM  FG  Y DSE    ++ + + P SSYMDVGPSTSYM+ H RG GEHNEYLY+EAP +VSD QEYQQEP+NQ ++E HR Q
Subjt:  -------SQTDYGSSRTMMSAFGLEYYDSEACTRFFYSEIDPSSSYMDVGPSTSYMHAHKRGRGEHNEYLYYEAPVEVSDPQEYQQEPENQNEQEPHRFQ

Query:  SRGQQPTRNRRRSGCWTH
        SR +QP RNR+ SGC TH
Subjt:  SRGQQPTRNRRRSGCWTH

TrEMBL top hitse value%identityAlignment
A0A5A7SLF8 Mediator of RNA polymerase II transcription subunit 12-like isoform X11.9e-4655.61Show/hide
Query:  GALIQQFDKDVAQEYINWYNIITWLYITRSGATLGHLRSNNIKLRDVVDDPQQVLDISNSNERNMEELHYMYDIPI------------------------
        G LIQQFD DV QEYI+ YN IT LYIT+ GAT    RSNN +LRDV DD QQVLDI N+N+R+MEE+H MY +PI                        
Subjt:  GALIQQFDKDVAQEYINWYNIITWLYITRSGATLGHLRSNNIKLRDVVDDPQQVLDISNSNERNMEELHYMYDIPI------------------------

Query:  ----------SQTDYGSSRTMMSAFGLEYYDSEACTRFFYSEIDPSSSYMDVGPSTSYMHAHKRGRGEHNEYLYYEAPVEVSDPQEYQQEPENQNEQEPH
                  +QT YGS   MM  FG+ Y D E  T ++ S + PSSSYMDVGPSTSYMH H+   GEHNEYLY+EAP EVSD QEYQQEPENQ E E H
Subjt:  ----------SQTDYGSSRTMMSAFGLEYYDSEACTRFFYSEIDPSSSYMDVGPSTSYMHAHKRGRGEHNEYLYYEAPVEVSDPQEYQQEPENQNEQEPH

Query:  RFQSR
        R QSR
Subjt:  RFQSR

A0A5A7SMM2 Mediator of RNA polymerase II transcription subunit 12-like isoform X17.8e-5363.07Show/hide
Query:  GALIQQFDKDVAQEYINWYNIITWLYITRSGATLGHLRSNNIKLRDVVDDPQQVLDISNSNERNMEELHYMYDIPI---------SQTDYGSSRTMMSAF
        G  IQQFD DV QEYI+WYN +  LYITRSG  +GHLRSNN +LRDV DD QQVLDI N+NER M+E++ MYD+PI         SQT YGS  TMM   
Subjt:  GALIQQFDKDVAQEYINWYNIITWLYITRSGATLGHLRSNNIKLRDVVDDPQQVLDISNSNERNMEELHYMYDIPI---------SQTDYGSSRTMMSAF

Query:  GLEYYDSEACTRFFYSEIDPSSSYMDVGPSTSYMHAHKRGRGEHNEYLYYEAPVEVSDPQEYQQEPENQNEQEPHR
        G  Y DSE  T ++ + + PSSSYMDVGPSTSYMH H RG GEHN+YLY+EAP  VSD QEY+QEPENQ ++E HR
Subjt:  GLEYYDSEACTRFFYSEIDPSSSYMDVGPSTSYMHAHKRGRGEHNEYLYYEAPVEVSDPQEYQQEPENQNEQEPHR

A0A5A7UIF6 Serine/threonine-protein phosphatase 7 long form-like protein7.5e-5666.67Show/hide
Query:  GALIQQFDKDVAQEYINWYNIITWLYITRSGATLGHLRSNNIKLRDVVDDPQQVLDISNSNERNMEELHYMYDIPISQTDYGSSRTMMSAFGLEYYDSEA
        G  IQQFD DV QEYI+ YN IT LYITR G  +GHLRSNN +LRDVVD PQQVLDI N+NE+ MEE+H MYD+PISQT YGS  T+M  FG  Y DS+ 
Subjt:  GALIQQFDKDVAQEYINWYNIITWLYITRSGATLGHLRSNNIKLRDVVDDPQQVLDISNSNERNMEELHYMYDIPISQTDYGSSRTMMSAFGLEYYDSEA

Query:  CTRFFYSEIDPSSSYMDVGPSTSYMHAHKRGRGEHNEYLYYEAPVEVSDPQEYQQEPENQNEQEPHRFQSR
         T ++ + + PSS YMDVGPS SYMH H RG GEHN+YLY+EAP +VSD QEYQQEPENQ ++E HR QSR
Subjt:  CTRFFYSEIDPSSSYMDVGPSTSYMHAHKRGRGEHNEYLYYEAPVEVSDPQEYQQEPENQNEQEPHRFQSR

A0A5A7V342 Mediator of RNA polymerase II transcription subunit 12-like isoform X11.8e-5456.88Show/hide
Query:  IQQFDKDVAQEYINWYNIITWLYITRSGATLGHLRSNNIKLRDVVDDPQQVLDISNSNERNMEELHYMYDIPI---------------------------
        IQQFDKDV QEYI+WY+ IT LYITR GA +G  RSNN +LRDV DD QQ LDI N+NER MEE+H MYD+PI                           
Subjt:  IQQFDKDVAQEYINWYNIITWLYITRSGATLGHLRSNNIKLRDVVDDPQQVLDISNSNERNMEELHYMYDIPI---------------------------

Query:  -------SQTDYGSSRTMMSAFGLEYYDSEACTRFFYSEIDPSSSYMDVGPSTSYMHAHKRGRGEHNEYLYYEAPVEVSDPQEYQQEPENQNEQEPHRFQ
               SQT YGS  TMM  F   Y D E    ++ + + PSSSY+DV PSTSYMH H RG GEHNEYLY+EAP +VSD QEYQQEPENQ ++E HR Q
Subjt:  -------SQTDYGSSRTMMSAFGLEYYDSEACTRFFYSEIDPSSSYMDVGPSTSYMHAHKRGRGEHNEYLYYEAPVEVSDPQEYQQEPENQNEQEPHRFQ

Query:  SRGQQPTRNRRRSGCWTH
        SR +QPTRNRRR GC TH
Subjt:  SRGQQPTRNRRRSGCWTH

A0A5D3DJV7 Serine/threonine-protein phosphatase 7 long form-like protein7.5e-5656.88Show/hide
Query:  IQQFDKDVAQEYINWYNIITWLYITRSGATLGHLRSNNIKLRDVVDDPQQVLDISNSNERNMEELHYMYDIPI---------------------------
        IQQFD DV QEYI+ YN IT LYITR GA +GHLRSNN +LRDVV+DPQQVLDI N+NER ME++H +YD+PI                           
Subjt:  IQQFDKDVAQEYINWYNIITWLYITRSGATLGHLRSNNIKLRDVVDDPQQVLDISNSNERNMEELHYMYDIPI---------------------------

Query:  -------SQTDYGSSRTMMSAFGLEYYDSEACTRFFYSEIDPSSSYMDVGPSTSYMHAHKRGRGEHNEYLYYEAPVEVSDPQEYQQEPENQNEQEPHRFQ
               SQT YGS  TMM  FG  Y DSE    ++ + + P SSYMDVGPSTSYM+ H RG GEHNEYLY+EAP +VSD QEYQQEP+NQ ++E HR Q
Subjt:  -------SQTDYGSSRTMMSAFGLEYYDSEACTRFFYSEIDPSSSYMDVGPSTSYMHAHKRGRGEHNEYLYYEAPVEVSDPQEYQQEPENQNEQEPHRFQ

Query:  SRGQQPTRNRRRSGCWTH
        SR +QP RNR+ SGC TH
Subjt:  SRGQQPTRNRRRSGCWTH

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTTGACCTTCTTCATCGTTATCAGGGAGCTTTGATTCAGCAATTCGATAAAGACGTGGCTCAAGAATACATCAATTGGTATAATATTATTACGTGGCTCTACATCAC
TCGATCAGGTGCAACTTTGGGTCATCTGAGATCAAACAACATTAAACTACGTGATGTTGTAGATGATCCACAACAGGTTCTTGATATATCCAATAGTAATGAGAGAAACA
TGGAGGAACTACATTATATGTACGATATACCTATTAGCCAGACTGATTATGGTAGCTCGAGGACAATGATGTCAGCATTTGGCCTAGAGTATTATGATTCAGAGGCATGT
ACAAGATTTTTTTATTCAGAAATCGATCCATCTTCTTCGTACATGGATGTTGGTCCATCAACTTCATACATGCATGCACACAAACGGGGTCGTGGAGAACATAACGAATA
TCTATACTATGAAGCACCTGTAGAGGTATCAGATCCACAAGAGTACCAACAAGAACCAGAGAATCAAAATGAGCAAGAGCCACATAGATTTCAAAGTCGTGGACAACAAC
CAACTCGAAATCGACGACGTTCGGGTTGTTGGACACATTGA
mRNA sequenceShow/hide mRNA sequence
ATGTTTGACCTTCTTCATCGTTATCAGGGAGCTTTGATTCAGCAATTCGATAAAGACGTGGCTCAAGAATACATCAATTGGTATAATATTATTACGTGGCTCTACATCAC
TCGATCAGGTGCAACTTTGGGTCATCTGAGATCAAACAACATTAAACTACGTGATGTTGTAGATGATCCACAACAGGTTCTTGATATATCCAATAGTAATGAGAGAAACA
TGGAGGAACTACATTATATGTACGATATACCTATTAGCCAGACTGATTATGGTAGCTCGAGGACAATGATGTCAGCATTTGGCCTAGAGTATTATGATTCAGAGGCATGT
ACAAGATTTTTTTATTCAGAAATCGATCCATCTTCTTCGTACATGGATGTTGGTCCATCAACTTCATACATGCATGCACACAAACGGGGTCGTGGAGAACATAACGAATA
TCTATACTATGAAGCACCTGTAGAGGTATCAGATCCACAAGAGTACCAACAAGAACCAGAGAATCAAAATGAGCAAGAGCCACATAGATTTCAAAGTCGTGGACAACAAC
CAACTCGAAATCGACGACGTTCGGGTTGTTGGACACATTGA
Protein sequenceShow/hide protein sequence
MFDLLHRYQGALIQQFDKDVAQEYINWYNIITWLYITRSGATLGHLRSNNIKLRDVVDDPQQVLDISNSNERNMEELHYMYDIPISQTDYGSSRTMMSAFGLEYYDSEAC
TRFFYSEIDPSSSYMDVGPSTSYMHAHKRGRGEHNEYLYYEAPVEVSDPQEYQQEPENQNEQEPHRFQSRGQQPTRNRRRSGCWTH