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PI0000376 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0000376
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionReverse transcriptase domain-containing protein
Genome locationchr05:8636175..8638218
RNA-Seq ExpressionPI0000376
SyntenyPI0000376
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0042317.1 non-LTR retroelement reverse transcriptase-like protein [Cucumis melo var. makuwa]4.7e-3639.86Show/hide
Query:  DSVCLTHLTFADDLMIFCYADTASIGFVGETLRRFGELSGLIANLEKSSIIVAGVDIEAATVLVDSMGFALGTLLVRYLGVPL-----------------
        + V LT LTFADDLMIFC AD  S+ FV ETL++FGEL GL ANL K SI VAG   E A+ L  +MGF LG L VRYL +PL                 
Subjt:  DSVCLTHLTFADDLMIFCYADTASIGFVGETLRRFGELSGLIANLEKSSIIVAGVDIEAATVLVDSMGFALGTLLVRYLGVPL-----------------

Query:  ------------------RLVGCVLR--------------------------------------------------------------IVLRSSSVLLVG
                          +LV  V R                                                               +L+  S+  V 
Subjt:  ------------------RLVGCVLR--------------------------------------------------------------IVLRSSSVLLVG

Query:  FGLGRLEFYPSLSLRAILRHRDILREHVRMEVGDERRCRVWLDPWLHGGAIIRQMGERVVYDATSSREARLCEFIGSDGEWKWPRV
         G+ R     S  LRAILR RD L+ HV +EVGD   CRVWLDPWL G  I+ Q+GERV+YDA S REARL EFIG DGEW+WPRV
Subjt:  FGLGRLEFYPSLSLRAILRHRDILREHVRMEVGDERRCRVWLDPWLHGGAIIRQMGERVVYDATSSREARLCEFIGSDGEWKWPRV

KAA0048521.1 uncharacterized protein E6C27_scaffold61G001420 [Cucumis melo var. makuwa]6.9e-0366.67Show/hide
Query:  MDRAQREVERDPRSVERSQAAGVATEAFWSAIRQEEASLCQK
        MDRAQREV+R+P S   S+ AG+ATEAFW+ +R EEASL QK
Subjt:  MDRAQREVERDPRSVERSQAAGVATEAFWSAIRQEEASLCQK

KAA0048521.1 uncharacterized protein E6C27_scaffold61G001420 [Cucumis melo var. makuwa]2.8e-3635.01Show/hide
Query:  QEMVGDYHGSSGPPRCAMKVDLQKAYDSV----CLTHLTFADDLMIFCYADTASIGFVGETLRRFGELSGLIANLEKSSIIVAGVDIEAATVLVDSMGFA
        QE+VG YH   G PRC MKVDLQKAYD V        L   DDLMIFC AD  S+ F+ ET++RFGELSGL ANL KS I + GV+   A+ L  +MGF+
Subjt:  QEMVGDYHGSSGPPRCAMKVDLQKAYDSV----CLTHLTFADDLMIFCYADTASIGFVGETLRRFGELSGLIANLEKSSIIVAGVDIEAATVLVDSMGFA

Query:  LGTLLVRYLGVP-----------------------------------LRLVGCVLR--------------------------------------------
        +G L VRYLG+P                                   L+LV  VLR                                            
Subjt:  LGTLLVRYLGVP-----------------------------------LRLVGCVLR--------------------------------------------

Query:  ---------------------------------------------IVLRSSSVLLVGFGLGRLEFYPSLSLRAILRHRDILREHVRMEVGDERRCRVWLD
                                                      +L+  S+L +  G+ R     S   R ILR RDIL++HV+MEVG+ R+CRVWL 
Subjt:  ---------------------------------------------IVLRSSSVLLVGFGLGRLEFYPSLSLRAILRHRDILREHVRMEVGDERRCRVWLD

Query:  PWLHGGAIIRQMGERVVYDATSSREARLCEFIGSDGE
        PW+ GG II+Q GERV+YDA S  +ARL +F+G DG+
Subjt:  PWLHGGAIIRQMGERVVYDATSSREARLCEFIGSDGE

TYK28312.1 uncharacterized protein E5676_scaffold600G001370 [Cucumis melo var. makuwa]2.5e-4554.21Show/hide
Query:  VCLTHLTFADDLMIFCYADTASIGFVGETLRRFGELSGLIANLEKSSIIVAGVDIEAATVLVDSMGFALGTLLVRYLGVPLRLVGCVLRIVLRSS-----
        V LTHLTFADDLMIFC AD  S+ F+ E+L++FGEL GL ANL KSSI VAG   EAA+ L  SMGF LG L VRYLG+PL  V      VL +S     
Subjt:  VCLTHLTFADDLMIFCYADTASIGFVGETLRRFGELSGLIANLEKSSIIVAGVDIEAATVLVDSMGFALGTLLVRYLGVPLRLVGCVLRIVLRSS-----

Query:  -----SVLLVGFGLGRL-----------------EFYPSLSLRAILRHRDILREHVRMEVGDERRCRVWLDPWLHGGAIIRQMGERVVYDATSSREARLC
             S L  G   GR                  E   S  LRAILR RD L+ HV+M VGD  RCRVWLDPWL GG I++Q+ E V+YDA S REARL 
Subjt:  -----SVLLVGFGLGRL-----------------EFYPSLSLRAILRHRDILREHVRMEVGDERRCRVWLDPWLHGGAIIRQMGERVVYDATSSREARLC

Query:  EFIGSDGEWKWPRV
        EFI  DGEW+WP+V
Subjt:  EFIGSDGEWKWPRV

TYK28312.1 uncharacterized protein E5676_scaffold600G001370 [Cucumis melo var. makuwa]5.3e-0366.67Show/hide
Query:  MDRAQREVERDPRSVERSQAAGVATEAFWSAIRQEEASLCQK
        MDRAQREV+R+P S   S+ AG+ATEAFW+ +R EEASL QK
Subjt:  MDRAQREVERDPRSVERSQAAGVATEAFWSAIRQEEASLCQK

TYK28312.1 uncharacterized protein E5676_scaffold600G001370 [Cucumis melo var. makuwa]4.3e-4554.21Show/hide
Query:  VCLTHLTFADDLMIFCYADTASIGFVGETLRRFGELSGLIANLEKSSIIVAGVDIEAATVLVDSMGFALGTLLVRYLGVPLRLVGCVLRIVLRSS-----
        V LTHLTFADDLMIFC AD  S+ F+ E+L++FGEL GL ANL KSSI VAG   EAA+ L  SMGF LG L VRYLG+PL  V      VL +S     
Subjt:  VCLTHLTFADDLMIFCYADTASIGFVGETLRRFGELSGLIANLEKSSIIVAGVDIEAATVLVDSMGFALGTLLVRYLGVPLRLVGCVLRIVLRSS-----

Query:  -----SVLLVGFGLGRL-----------------EFYPSLSLRAILRHRDILREHVRMEVGDERRCRVWLDPWLHGGAIIRQMGERVVYDATSSREARLC
             S L  G   GR                  E   S  LRAILR RD L+ HV+M VGD  RCRVWLDPWL GG I+ Q+ E V+YDA S REARL 
Subjt:  -----SVLLVGFGLGRL-----------------EFYPSLSLRAILRHRDILREHVRMEVGDERRCRVWLDPWLHGGAIIRQMGERVVYDATSSREARLC

Query:  EFIGSDGEWKWPRV
        EFI  DGEW+WP+V
Subjt:  EFIGSDGEWKWPRV

XP_031745730.1 uncharacterized protein LOC116406187 [Cucumis sativus]1.1e-3533.07Show/hide
Query:  QEMVGDYHGSSGPPRCAMKVDLQKAYDSV-----------------------------------------------------------------------
        QE+VG YH   G PRC MKVDL KAYDSV                                                                       
Subjt:  QEMVGDYHGSSGPPRCAMKVDLQKAYDSV-----------------------------------------------------------------------

Query:  ------------C----LTHLTFADDLMIFCYADTASIGFVGETLRRFGELSGLIANLEKSSIIVAGVDIEAATVLVDSMGFALGTLLVRYLGVPLRLVG
                    C    LTHLTF DDLMIFC AD  S+ F  ET++RFGELSGL ANL KSSI + GV+   A+ L  +MGF++G LL   LG    L  
Subjt:  ------------C----LTHLTFADDLMIFCYADTASIGFVGETLRRFGELSGLIANLEKSSIIVAGVDIEAATVLVDSMGFALGTLLVRYLGVPLRLVG

Query:  CVLRIVLRSSSVLLVGFGL-------------------GR--------------------------------------------------LEFY------
        C   IV+   SVL V FGL                   GR                                                  +E Y      
Subjt:  CVLRIVLRSSSVLLVGFGL-------------------GR--------------------------------------------------LEFY------

Query:  ---------PSLSLRAILRHRDILREHVRMEVGDERRCRVWLDPWLHGGAIIRQMGERVVYDATSSREARLCEFIGSDGEWKWPRVF
                  S   R ILR +DIL+ HV+MEVG+ R+ RVWL PW+ GG II+Q GERV+YDA S  +ARL +F+G DG+W+WP V+
Subjt:  ---------PSLSLRAILRHRDILREHVRMEVGDERRCRVWLDPWLHGGAIIRQMGERVVYDATSSREARLCEFIGSDGEWKWPRVF

TrEMBL top hitse value%identityAlignment
A0A1S3BSI8 uncharacterized protein LOC1034932252.5e-3536.8Show/hide
Query:  EEASLCQKSQEMVGDYHGSSGPPRCAMKVDLQKAYDSVCLTHL---------------TFADDLMIFCYADT------------ASIGFVGETLRRFGEL
        E   LC   QE+VG YH +SG PRC +KVDLQKAYDSV    L                  D L +F +                S  F     +RFGEL
Subjt:  EEASLCQKSQEMVGDYHGSSGPPRCAMKVDLQKAYDSVCLTHL---------------TFADDLMIFCYADT------------ASIGFVGETLRRFGEL

Query:  SGLIANLEKSSIIVAGVDIEAATVLVDSMGFALGTLLVRYLGVPL---RL-----VGCVLRIV--LRSSSVLLVGFGLGRLEFYPSL-------------
        SGL AN  KSSI +AGV+ E A+ L   MGF  G L VRYLG+PL   RL     V  + RI   +RS S  ++ F  GRL+   S+             
Subjt:  SGLIANLEKSSIIVAGVDIEAATVLVDSMGFALGTLLVRYLGVPL---RL-----VGCVLRIV--LRSSSVLLVGFGLGRLEFYPSL-------------

Query:  ----------------------------------------------------------------SLRAILRHRDILREHVRMEVGDERRCRVWLDPWLHG
                                                                         LRAILR ++ L++HVRM+VG+  RCRVWLDPWL  
Subjt:  ----------------------------------------------------------------SLRAILRHRDILREHVRMEVGDERRCRVWLDPWLHG

Query:  GAIIRQMGERVVYDATSSREARLCEFIGSDGEWKWPR
        GAI+ ++GERV+YDA S REA L  FIG DGEW WPR
Subjt:  GAIIRQMGERVVYDATSSREARLCEFIGSDGEWKWPR

A0A5A7U4M4 Reverse transcriptase domain-containing protein3.3e-0366.67Show/hide
Query:  MDRAQREVERDPRSVERSQAAGVATEAFWSAIRQEEASLCQK
        MDRAQREV+R+P S   S+ AG+ATEAFW+ +R EEASL QK
Subjt:  MDRAQREVERDPRSVERSQAAGVATEAFWSAIRQEEASLCQK

A0A5A7U4M4 Reverse transcriptase domain-containing protein2.3e-3639.86Show/hide
Query:  DSVCLTHLTFADDLMIFCYADTASIGFVGETLRRFGELSGLIANLEKSSIIVAGVDIEAATVLVDSMGFALGTLLVRYLGVPL-----------------
        + V LT LTFADDLMIFC AD  S+ FV ETL++FGEL GL ANL K SI VAG   E A+ L  +MGF LG L VRYL +PL                 
Subjt:  DSVCLTHLTFADDLMIFCYADTASIGFVGETLRRFGELSGLIANLEKSSIIVAGVDIEAATVLVDSMGFALGTLLVRYLGVPL-----------------

Query:  ------------------RLVGCVLR--------------------------------------------------------------IVLRSSSVLLVG
                          +LV  V R                                                               +L+  S+  V 
Subjt:  ------------------RLVGCVLR--------------------------------------------------------------IVLRSSSVLLVG

Query:  FGLGRLEFYPSLSLRAILRHRDILREHVRMEVGDERRCRVWLDPWLHGGAIIRQMGERVVYDATSSREARLCEFIGSDGEWKWPRV
         G+ R     S  LRAILR RD L+ HV +EVGD   CRVWLDPWL G  I+ Q+GERV+YDA S REARL EFIG DGEW+WPRV
Subjt:  FGLGRLEFYPSLSLRAILRHRDILREHVRMEVGDERRCRVWLDPWLHGGAIIRQMGERVVYDATSSREARLCEFIGSDGEWKWPRV

A0A5A7UV01 F17F8.53.3e-3532.75Show/hide
Query:  EEASLCQKSQEMVGDYHGSSGPPRCAMKVDLQKAYDSV------------------------------------------------------C----LTH
        E   LC   QE+VG YH +SG PRC +KVD QKAYDSV                                                      C    LT+
Subjt:  EEASLCQKSQEMVGDYHGSSGPPRCAMKVDLQKAYDSV------------------------------------------------------C----LTH

Query:  LTFADDLMIFCYADTASIGFVGETLRRFGELSGLIANLEKSSIIVAGVDIEAATVLVDSMGFALGTLLVRYLGVPL-------------------RLVGC
        LTFADDLMIFC AD  SI F+ E L++FGELSGL AN  KSSI VAGV+ E A+ L   MGF  G L +RYLG+PL                   R+   
Subjt:  LTFADDLMIFCYADTASIGFVGETLRRFGELSGLIANLEKSSIIVAGVDIEAATVLVDSMGFALGTLLVRYLGVPL-------------------RLVGC

Query:  VLRIVLRSSSVLLVGFGLGRLEFY----------------------------------------------------------------------------
          R++  +  + LV F L  L+ Y                                                                            
Subjt:  VLRIVLRSSSVLLVGFGLGRLEFY----------------------------------------------------------------------------

Query:  ------------------------PSLSLRAILRHRDILREHVRMEVGDERRCRVWLDPWLHGGAIIRQMGERVVYDATSSREARLCEFIGSDGEWKWPR
                                 S  LRAILR R+ L+  V M+VG+   CRVWLD WL G AI+ Q+GERV+YDA S REARL +FI  DGEW WPR
Subjt:  ------------------------PSLSLRAILRHRDILREHVRMEVGDERRCRVWLDPWLHGGAIIRQMGERVVYDATSSREARLCEFIGSDGEWKWPR

A0A5D3DXQ8 Reverse transcriptase domain-containing protein1.2e-4554.21Show/hide
Query:  VCLTHLTFADDLMIFCYADTASIGFVGETLRRFGELSGLIANLEKSSIIVAGVDIEAATVLVDSMGFALGTLLVRYLGVPLRLVGCVLRIVLRSS-----
        V LTHLTFADDLMIFC AD  S+ F+ E+L++FGEL GL ANL KSSI VAG   EAA+ L  SMGF LG L VRYLG+PL  V      VL +S     
Subjt:  VCLTHLTFADDLMIFCYADTASIGFVGETLRRFGELSGLIANLEKSSIIVAGVDIEAATVLVDSMGFALGTLLVRYLGVPLRLVGCVLRIVLRSS-----

Query:  -----SVLLVGFGLGRL-----------------EFYPSLSLRAILRHRDILREHVRMEVGDERRCRVWLDPWLHGGAIIRQMGERVVYDATSSREARLC
             S L  G   GR                  E   S  LRAILR RD L+ HV+M VGD  RCRVWLDPWL GG I++Q+ E V+YDA S REARL 
Subjt:  -----SVLLVGFGLGRL-----------------EFYPSLSLRAILRHRDILREHVRMEVGDERRCRVWLDPWLHGGAIIRQMGERVVYDATSSREARLC

Query:  EFIGSDGEWKWPRV
        EFI  DGEW+WP+V
Subjt:  EFIGSDGEWKWPRV

A0A5D3DXQ8 Reverse transcriptase domain-containing protein2.6e-0366.67Show/hide
Query:  MDRAQREVERDPRSVERSQAAGVATEAFWSAIRQEEASLCQK
        MDRAQREV+R+P S   S+ AG+ATEAFW+ +R EEASL QK
Subjt:  MDRAQREVERDPRSVERSQAAGVATEAFWSAIRQEEASLCQK

A0A5D3DXQ8 Reverse transcriptase domain-containing protein2.1e-4554.21Show/hide
Query:  VCLTHLTFADDLMIFCYADTASIGFVGETLRRFGELSGLIANLEKSSIIVAGVDIEAATVLVDSMGFALGTLLVRYLGVPLRLVGCVLRIVLRSS-----
        V LTHLTFADDLMIFC AD  S+ F+ E+L++FGEL GL ANL KSSI VAG   EAA+ L  SMGF LG L VRYLG+PL  V      VL +S     
Subjt:  VCLTHLTFADDLMIFCYADTASIGFVGETLRRFGELSGLIANLEKSSIIVAGVDIEAATVLVDSMGFALGTLLVRYLGVPLRLVGCVLRIVLRSS-----

Query:  -----SVLLVGFGLGRL-----------------EFYPSLSLRAILRHRDILREHVRMEVGDERRCRVWLDPWLHGGAIIRQMGERVVYDATSSREARLC
             S L  G   GR                  E   S  LRAILR RD L+ HV+M VGD  RCRVWLDPWL GG I+ Q+ E V+YDA S REARL 
Subjt:  -----SVLLVGFGLGRL-----------------EFYPSLSLRAILRHRDILREHVRMEVGDERRCRVWLDPWLHGGAIIRQMGERVVYDATSSREARLC

Query:  EFIGSDGEWKWPRV
        EFI  DGEW+WP+V
Subjt:  EFIGSDGEWKWPRV

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGACAGGGCTCAGCGGGAGGTTGAGCGGGATCCAAGGTCTGTAGAGAGGAGTCAGGCTGCTGGTGTTGCGACTGAGGCTTTTTGGTCAGCTATCCGTCAGGAAGAAGC
CTCTCTTTGTCAGAAATCACAGGAGATGGTGGGGGATTATCATGGTTCTTCTGGTCCGCCTAGGTGTGCGATGAAGGTGGATCTTCAGAAGGCTTATGATTCGGTATGTT
TGACGCATCTAACCTTCGCTGATGATCTTATGATTTTTTGTTATGCTGATACCGCTTCCATTGGCTTTGTGGGCGAGACTCTTCGTCGATTTGGAGAGTTATCGGGGTTG
ATTGCTAATCTGGAGAAGAGCTCTATAATTGTGGCGGGGGTAGACATTGAGGCTGCTACTGTGTTGGTGGATAGTATGGGGTTTGCGCTGGGTACTTTGCTTGTTCGTTA
CCTGGGGGTTCCCTTACGACTGGTGGGCTGCGTTCTTCGGATTGTGCTCCGCTCATCCAGCGTATTACTAGTCGGATTCGGTCTTGGTCGACTAGAGTTTTATCCTTCGC
TGAGTCTTCGTGCTATTTTGAGGCATCGTGATATCCTTAGAGAGCATGTCCGCATGGAGGTTGGTGATGAGAGGCGGTGTCGTGTGTGGCTTGACCCTTGGCTGCACGGA
GGCGCGATCATTCGGCAGATGGGTGAGAGGGTGGTGTATGATGCTACGAGTAGTAGGGAGGCTAGGCTTTGTGAGTTCATTGGCTCGGATGGTGAGTGGAAGTGGCCGAG
GGTTTTTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGACAGGGCTCAGCGGGAGGTTGAGCGGGATCCAAGGTCTGTAGAGAGGAGTCAGGCTGCTGGTGTTGCGACTGAGGCTTTTTGGTCAGCTATCCGTCAGGAAGAAGC
CTCTCTTTGTCAGAAATCACAGGAGATGGTGGGGGATTATCATGGTTCTTCTGGTCCGCCTAGGTGTGCGATGAAGGTGGATCTTCAGAAGGCTTATGATTCGGTATGTT
TGACGCATCTAACCTTCGCTGATGATCTTATGATTTTTTGTTATGCTGATACCGCTTCCATTGGCTTTGTGGGCGAGACTCTTCGTCGATTTGGAGAGTTATCGGGGTTG
ATTGCTAATCTGGAGAAGAGCTCTATAATTGTGGCGGGGGTAGACATTGAGGCTGCTACTGTGTTGGTGGATAGTATGGGGTTTGCGCTGGGTACTTTGCTTGTTCGTTA
CCTGGGGGTTCCCTTACGACTGGTGGGCTGCGTTCTTCGGATTGTGCTCCGCTCATCCAGCGTATTACTAGTCGGATTCGGTCTTGGTCGACTAGAGTTTTATCCTTCGC
TGAGTCTTCGTGCTATTTTGAGGCATCGTGATATCCTTAGAGAGCATGTCCGCATGGAGGTTGGTGATGAGAGGCGGTGTCGTGTGTGGCTTGACCCTTGGCTGCACGGA
GGCGCGATCATTCGGCAGATGGGTGAGAGGGTGGTGTATGATGCTACGAGTAGTAGGGAGGCTAGGCTTTGTGAGTTCATTGGCTCGGATGGTGAGTGGAAGTGGCCGAG
GGTTTTTTGA
Protein sequenceShow/hide protein sequence
MDRAQREVERDPRSVERSQAAGVATEAFWSAIRQEEASLCQKSQEMVGDYHGSSGPPRCAMKVDLQKAYDSVCLTHLTFADDLMIFCYADTASIGFVGETLRRFGELSGL
IANLEKSSIIVAGVDIEAATVLVDSMGFALGTLLVRYLGVPLRLVGCVLRIVLRSSSVLLVGFGLGRLEFYPSLSLRAILRHRDILREHVRMEVGDERRCRVWLDPWLHG
GAIIRQMGERVVYDATSSREARLCEFIGSDGEWKWPRVF