; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

PI0000461 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0000461
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionRetrovirus-related Pol polyprotein from transposon TNT 1-94
Genome locationchr12:19640068..19640351
RNA-Seq ExpressionPI0000461
SyntenyPI0000461
Gene Ontology termsGO:0015074 - DNA integration (biological process)
GO:0055085 - transmembrane transport (biological process)
GO:0016021 - integral component of membrane (cellular component)
GO:0003676 - nucleic acid binding (molecular function)
GO:0005524 - ATP binding (molecular function)
GO:0008270 - zinc ion binding (molecular function)
GO:0140359 - ABC-type transmembrane transporter activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0025181.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa]1.3e-2978.72Show/hide
Query:  MEALDIWEAVEEDYEIPTLLDNPTMAQI-------------KACLFATVSSTIFTRIMTLRSTYEIWNYLNSEYEGNERIKGMCVLNLIREFEL
        MEALDIWEAVEEDYEIP L DNPTMAQI             KACLFA VSSTIFTRIMTLRS YEIWNYL SEYEG+ERIKGM VLNLIREFEL
Subjt:  MEALDIWEAVEEDYEIPTLLDNPTMAQI-------------KACLFATVSSTIFTRIMTLRSTYEIWNYLNSEYEGNERIKGMCVLNLIREFEL
KAA0033140.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa]6.0e-3077.66Show/hide
Query:  MEALDIWEAVEEDYEIPTLLDNPTMAQI-------------KACLFATVSSTIFTRIMTLRSTYEIWNYLNSEYEGNERIKGMCVLNLIREFEL
        MEALDIWEAVEEDY IP L DNPTMAQI             KACLFA VSSTIFTRIMT+RS YEIWNYL SEYEG+ERIKGMCVLNLIREFEL
Subjt:  MEALDIWEAVEEDYEIPTLLDNPTMAQI-------------KACLFATVSSTIFTRIMTLRSTYEIWNYLNSEYEGNERIKGMCVLNLIREFEL
KAA0041382.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa]1.3e-2978.72Show/hide
Query:  MEALDIWEAVEEDYEIPTLLDNPTMAQI-------------KACLFATVSSTIFTRIMTLRSTYEIWNYLNSEYEGNERIKGMCVLNLIREFEL
        MEALDIWEAVEEDYEIP L DNPTMAQI             KACLFA VSSTIFTRIMTLRS YEIWNYL SEYEG+ERIKGM VLNLIREFEL
Subjt:  MEALDIWEAVEEDYEIPTLLDNPTMAQI-------------KACLFATVSSTIFTRIMTLRSTYEIWNYLNSEYEGNERIKGMCVLNLIREFEL
KAA0064094.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa]1.3e-2978.72Show/hide
Query:  MEALDIWEAVEEDYEIPTLLDNPTMAQI-------------KACLFATVSSTIFTRIMTLRSTYEIWNYLNSEYEGNERIKGMCVLNLIREFEL
        MEALDIWEAVEEDYEIP L DNPTMAQI             KACLFA VSSTIFTRIMTLRS YEIWNYL SEYEG+ERIKGM VLNLIREFEL
Subjt:  MEALDIWEAVEEDYEIPTLLDNPTMAQI-------------KACLFATVSSTIFTRIMTLRSTYEIWNYLNSEYEGNERIKGMCVLNLIREFEL
TYJ95793.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa]1.3e-2978.72Show/hide
Query:  MEALDIWEAVEEDYEIPTLLDNPTMAQI-------------KACLFATVSSTIFTRIMTLRSTYEIWNYLNSEYEGNERIKGMCVLNLIREFEL
        MEALDIWEAVEEDYEIP L DNPTMAQI             KACLFA VSSTIFTRIMTLRS YEIWNYL SEYEG+ERIKGM VLNLIREFEL
Subjt:  MEALDIWEAVEEDYEIPTLLDNPTMAQI-------------KACLFATVSSTIFTRIMTLRSTYEIWNYLNSEYEGNERIKGMCVLNLIREFEL
TrEMBL top hitse value%identityAlignment
A0A5A7SQF5 Retrovirus-related Pol polyprotein from transposon TNT 1-942.9e-3077.66Show/hide
Query:  MEALDIWEAVEEDYEIPTLLDNPTMAQI-------------KACLFATVSSTIFTRIMTLRSTYEIWNYLNSEYEGNERIKGMCVLNLIREFEL
        MEALDIWEAVEEDY IP L DNPTMAQI             KACLFA VSSTIFTRIMT+RS YEIWNYL SEYEG+ERIKGMCVLNLIREFEL
Subjt:  MEALDIWEAVEEDYEIPTLLDNPTMAQI-------------KACLFATVSSTIFTRIMTLRSTYEIWNYLNSEYEGNERIKGMCVLNLIREFEL
A0A5D3BL45 Retrovirus-related Pol polyprotein from transposon TNT 1-946.5e-3078.72Show/hide
Query:  MEALDIWEAVEEDYEIPTLLDNPTMAQI-------------KACLFATVSSTIFTRIMTLRSTYEIWNYLNSEYEGNERIKGMCVLNLIREFEL
        MEALDIWEAVEEDYEIP L DNPTMAQI             KACLFA VSSTIFTRIMTLRS YEIWNYL SEYEG+ERIKGM VLNLIREFEL
Subjt:  MEALDIWEAVEEDYEIPTLLDNPTMAQI-------------KACLFATVSSTIFTRIMTLRSTYEIWNYLNSEYEGNERIKGMCVLNLIREFEL
A0A5D3DBU0 Retrovirus-related Pol polyprotein from transposon TNT 1-946.5e-3078.72Show/hide
Query:  MEALDIWEAVEEDYEIPTLLDNPTMAQI-------------KACLFATVSSTIFTRIMTLRSTYEIWNYLNSEYEGNERIKGMCVLNLIREFEL
        MEALDIWEAVEEDYEIP L DNPTMAQI             KACLFA VSSTIFTRIMTLRS YEIWNYL SEYEG+ERIKGM VLNLIREFEL
Subjt:  MEALDIWEAVEEDYEIPTLLDNPTMAQI-------------KACLFATVSSTIFTRIMTLRSTYEIWNYLNSEYEGNERIKGMCVLNLIREFEL
A0A5D3DMJ1 Retrovirus-related Pol polyprotein from transposon TNT 1-946.5e-3078.72Show/hide
Query:  MEALDIWEAVEEDYEIPTLLDNPTMAQI-------------KACLFATVSSTIFTRIMTLRSTYEIWNYLNSEYEGNERIKGMCVLNLIREFEL
        MEALDIWEAVEEDYEIP L DNPTMAQI             KACLFA VSSTIFTRIMTLRS YEIWNYL SEYEG+ERIKGM VLNLIREFEL
Subjt:  MEALDIWEAVEEDYEIPTLLDNPTMAQI-------------KACLFATVSSTIFTRIMTLRSTYEIWNYLNSEYEGNERIKGMCVLNLIREFEL
A0A5D3E2V7 Retrovirus-related Pol polyprotein from transposon TNT 1-946.5e-3078.72Show/hide
Query:  MEALDIWEAVEEDYEIPTLLDNPTMAQI-------------KACLFATVSSTIFTRIMTLRSTYEIWNYLNSEYEGNERIKGMCVLNLIREFEL
        MEALDIWEAVEEDYEIP L DNPTMAQI             KACLFA VSSTIFTRIMTLRS YEIWNYL SEYEG+ERIKGM VLNLIREFEL
Subjt:  MEALDIWEAVEEDYEIPTLLDNPTMAQI-------------KACLFATVSSTIFTRIMTLRSTYEIWNYLNSEYEGNERIKGMCVLNLIREFEL
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAAGCTTTGGATATTTGGGAAGCAGTGGAAGAGGATTATGAAATTCCTACTCTTCTAGACAATCCTACCATGGCGCAAATCAAAGCATGTTTGTTCGCTACAGTCTC
ATCTACTATCTTCACTCGAATTATGACTCTGAGATCAACATATGAGATATGGAATTATCTCAACTCAGAGTATGAGGGAAATGAAAGAATCAAAGGAATGTGTGTGCTAA
ACTTGATTCGAGAATTCGAGTTGTAG
mRNA sequenceShow/hide mRNA sequence
ATGGAAGCTTTGGATATTTGGGAAGCAGTGGAAGAGGATTATGAAATTCCTACTCTTCTAGACAATCCTACCATGGCGCAAATCAAAGCATGTTTGTTCGCTACAGTCTC
ATCTACTATCTTCACTCGAATTATGACTCTGAGATCAACATATGAGATATGGAATTATCTCAACTCAGAGTATGAGGGAAATGAAAGAATCAAAGGAATGTGTGTGCTAA
ACTTGATTCGAGAATTCGAGTTGTAG
Protein sequenceShow/hide protein sequence
MEALDIWEAVEEDYEIPTLLDNPTMAQIKACLFATVSSTIFTRIMTLRSTYEIWNYLNSEYEGNERIKGMCVLNLIREFEL