; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

PI0000466 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0000466
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionGag/pol protein
Genome locationchr07:13816210..13816692
RNA-Seq ExpressionPI0000466
SyntenyPI0000466
Gene Ontology termsGO:0006508 - proteolysis (biological process)
GO:0015074 - DNA integration (biological process)
GO:0003676 - nucleic acid binding (molecular function)
GO:0008234 - cysteine-type peptidase activity (molecular function)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0044955.1 gag/pol protein [Cucumis melo var. makuwa]4.2e-5171.81Show/hide
Query:  PCSKASQTVRDAYDRWTKANEKARVYILASMSDVLSKKHESMVTTRQIMDSLQEMFGQPSIQIWHEAIKYVYNARMKEGQSVREHVFDMMVQFNVVETNG
        P + A++TVR+ Y+RW KANEKAR YILAS+S+VL+KKHESM+T R+IMDSLQEMFGQ S QI H+A+KY+YNARM EG SVREHV +MMV FNV E NG
Subjt:  PCSKASQTVRDAYDRWTKANEKARVYILASMSDVLSKKHESMVTTRQIMDSLQEMFGQPSIQIWHEAIKYVYNARMKEGQSVREHVFDMMVQFNVVETNG

Query:  AVIDEQSQVSFILESFPKSFLQFRSNAVMNKIEYTMTTLQTSYRLFSLL
        AVIDE SQVSFILES P+SFLQFRSNAVMNKI YT+TTL    + F  L
Subjt:  AVIDEQSQVSFILESFPKSFLQFRSNAVMNKIEYTMTTLQTSYRLFSLL

KAA0048404.1 gag/pol protein [Cucumis melo var. makuwa]4.2e-5171.81Show/hide
Query:  PCSKASQTVRDAYDRWTKANEKARVYILASMSDVLSKKHESMVTTRQIMDSLQEMFGQPSIQIWHEAIKYVYNARMKEGQSVREHVFDMMVQFNVVETNG
        P + A++TVR+ Y+RW KANEKAR YILAS+S+VL+KKHESM+T R+IMDSLQEMFGQ S QI H+A+KY+YNARM EG SVREHV +MMV FNV E NG
Subjt:  PCSKASQTVRDAYDRWTKANEKARVYILASMSDVLSKKHESMVTTRQIMDSLQEMFGQPSIQIWHEAIKYVYNARMKEGQSVREHVFDMMVQFNVVETNG

Query:  AVIDEQSQVSFILESFPKSFLQFRSNAVMNKIEYTMTTLQTSYRLFSLL
        AVIDE SQVSFILES P+SFLQFRSNAVMNKI YT+TTL    + F  L
Subjt:  AVIDEQSQVSFILESFPKSFLQFRSNAVMNKIEYTMTTLQTSYRLFSLL

KAA0054490.1 gag/pol protein [Cucumis melo var. makuwa]4.2e-5171.81Show/hide
Query:  PCSKASQTVRDAYDRWTKANEKARVYILASMSDVLSKKHESMVTTRQIMDSLQEMFGQPSIQIWHEAIKYVYNARMKEGQSVREHVFDMMVQFNVVETNG
        P + A++TVR+ Y+RW KANEKAR YILAS+S+VL+KKHESM+T R+IMDSLQEMFGQ S QI H+A+KY+YNARM EG SVREHV +MMV FNV E NG
Subjt:  PCSKASQTVRDAYDRWTKANEKARVYILASMSDVLSKKHESMVTTRQIMDSLQEMFGQPSIQIWHEAIKYVYNARMKEGQSVREHVFDMMVQFNVVETNG

Query:  AVIDEQSQVSFILESFPKSFLQFRSNAVMNKIEYTMTTLQTSYRLFSLL
        AVIDE SQVSFILES P+SFLQFRSNAVMNKI YT+TTL    + F  L
Subjt:  AVIDEQSQVSFILESFPKSFLQFRSNAVMNKIEYTMTTLQTSYRLFSLL

KAA0061339.1 gag/pol protein [Cucumis melo var. makuwa]4.2e-5171.81Show/hide
Query:  PCSKASQTVRDAYDRWTKANEKARVYILASMSDVLSKKHESMVTTRQIMDSLQEMFGQPSIQIWHEAIKYVYNARMKEGQSVREHVFDMMVQFNVVETNG
        P + A+QTVR+ Y+RW KANEKAR YILAS+S+VL+KKHESM+T R+IMDSLQEMFGQ S QI H+A+KY+YNARM EG SVREHV ++MV FNV E NG
Subjt:  PCSKASQTVRDAYDRWTKANEKARVYILASMSDVLSKKHESMVTTRQIMDSLQEMFGQPSIQIWHEAIKYVYNARMKEGQSVREHVFDMMVQFNVVETNG

Query:  AVIDEQSQVSFILESFPKSFLQFRSNAVMNKIEYTMTTLQTSYRLFSLL
        AVIDE SQVSFILES P+SFLQFRSNAVMNKI YT+TTL    + F  L
Subjt:  AVIDEQSQVSFILESFPKSFLQFRSNAVMNKIEYTMTTLQTSYRLFSLL

TYK14550.1 gag/pol protein [Cucumis melo var. makuwa]4.2e-5171.81Show/hide
Query:  PCSKASQTVRDAYDRWTKANEKARVYILASMSDVLSKKHESMVTTRQIMDSLQEMFGQPSIQIWHEAIKYVYNARMKEGQSVREHVFDMMVQFNVVETNG
        P + A++TVR+ Y+RW KANEKAR YILAS+S+VL+KKHESM+T R+IMDSLQEMFGQ S QI H+A+KY+YNARM EG SVREHV +MMV FNV E NG
Subjt:  PCSKASQTVRDAYDRWTKANEKARVYILASMSDVLSKKHESMVTTRQIMDSLQEMFGQPSIQIWHEAIKYVYNARMKEGQSVREHVFDMMVQFNVVETNG

Query:  AVIDEQSQVSFILESFPKSFLQFRSNAVMNKIEYTMTTLQTSYRLFSLL
        AVIDE SQVSFILES P+SFLQFRSNAVMNKI YT+TTL    + F  L
Subjt:  AVIDEQSQVSFILESFPKSFLQFRSNAVMNKIEYTMTTLQTSYRLFSLL

TrEMBL top hitse value%identityAlignment
A0A5A7SMH8 Gag/pol protein2.0e-5171.81Show/hide
Query:  PCSKASQTVRDAYDRWTKANEKARVYILASMSDVLSKKHESMVTTRQIMDSLQEMFGQPSIQIWHEAIKYVYNARMKEGQSVREHVFDMMVQFNVVETNG
        P + A++TVR+ Y+RW KANEKAR YILAS+S+VL+KKHESM+T R+IMDSLQEMFGQ S QI H+A+KY+YNARM EG SVREHV +MMV FNV E NG
Subjt:  PCSKASQTVRDAYDRWTKANEKARVYILASMSDVLSKKHESMVTTRQIMDSLQEMFGQPSIQIWHEAIKYVYNARMKEGQSVREHVFDMMVQFNVVETNG

Query:  AVIDEQSQVSFILESFPKSFLQFRSNAVMNKIEYTMTTLQTSYRLFSLL
        AVIDE SQVSFILES P+SFLQFRSNAVMNKI YT+TTL    + F  L
Subjt:  AVIDEQSQVSFILESFPKSFLQFRSNAVMNKIEYTMTTLQTSYRLFSLL

A0A5A7TU93 Gag/pol protein2.0e-5171.81Show/hide
Query:  PCSKASQTVRDAYDRWTKANEKARVYILASMSDVLSKKHESMVTTRQIMDSLQEMFGQPSIQIWHEAIKYVYNARMKEGQSVREHVFDMMVQFNVVETNG
        P + A++TVR+ Y+RW KANEKAR YILAS+S+VL+KKHESM+T R+IMDSLQEMFGQ S QI H+A+KY+YNARM EG SVREHV +MMV FNV E NG
Subjt:  PCSKASQTVRDAYDRWTKANEKARVYILASMSDVLSKKHESMVTTRQIMDSLQEMFGQPSIQIWHEAIKYVYNARMKEGQSVREHVFDMMVQFNVVETNG

Query:  AVIDEQSQVSFILESFPKSFLQFRSNAVMNKIEYTMTTLQTSYRLFSLL
        AVIDE SQVSFILES P+SFLQFRSNAVMNKI YT+TTL    + F  L
Subjt:  AVIDEQSQVSFILESFPKSFLQFRSNAVMNKIEYTMTTLQTSYRLFSLL

A0A5A7TWB9 Gag/pol protein2.0e-5171.81Show/hide
Query:  PCSKASQTVRDAYDRWTKANEKARVYILASMSDVLSKKHESMVTTRQIMDSLQEMFGQPSIQIWHEAIKYVYNARMKEGQSVREHVFDMMVQFNVVETNG
        P + A++TVR+ Y+RW KANEKAR YILAS+S+VL+KKHESM+T R+IMDSLQEMFGQ S QI H+A+KY+YNARM EG SVREHV +MMV FNV E NG
Subjt:  PCSKASQTVRDAYDRWTKANEKARVYILASMSDVLSKKHESMVTTRQIMDSLQEMFGQPSIQIWHEAIKYVYNARMKEGQSVREHVFDMMVQFNVVETNG

Query:  AVIDEQSQVSFILESFPKSFLQFRSNAVMNKIEYTMTTLQTSYRLFSLL
        AVIDE SQVSFILES P+SFLQFRSNAVMNKI YT+TTL    + F  L
Subjt:  AVIDEQSQVSFILESFPKSFLQFRSNAVMNKIEYTMTTLQTSYRLFSLL

A0A5A7V4M1 Gag/pol protein2.0e-5171.81Show/hide
Query:  PCSKASQTVRDAYDRWTKANEKARVYILASMSDVLSKKHESMVTTRQIMDSLQEMFGQPSIQIWHEAIKYVYNARMKEGQSVREHVFDMMVQFNVVETNG
        P + A++TVR+ Y+RW KANEKAR YILAS+S+VL+KKHESM+T R+IMDSLQEMFGQ S QI H+A+KY+YNARM EG SVREHV +MMV FNV E NG
Subjt:  PCSKASQTVRDAYDRWTKANEKARVYILASMSDVLSKKHESMVTTRQIMDSLQEMFGQPSIQIWHEAIKYVYNARMKEGQSVREHVFDMMVQFNVVETNG

Query:  AVIDEQSQVSFILESFPKSFLQFRSNAVMNKIEYTMTTLQTSYRLFSLL
        AVIDE SQVSFILES P+SFLQFRSNAVMNKI YT+TTL    + F  L
Subjt:  AVIDEQSQVSFILESFPKSFLQFRSNAVMNKIEYTMTTLQTSYRLFSLL

A0A5D3CPJ6 Gag/pol protein2.0e-5171.81Show/hide
Query:  PCSKASQTVRDAYDRWTKANEKARVYILASMSDVLSKKHESMVTTRQIMDSLQEMFGQPSIQIWHEAIKYVYNARMKEGQSVREHVFDMMVQFNVVETNG
        P + A++TVR+ Y+RW KANEKAR YILAS+S+VL+KKHESM+T R+IMDSLQEMFGQ S QI H+A+KY+YNARM EG SVREHV +MMV FNV E NG
Subjt:  PCSKASQTVRDAYDRWTKANEKARVYILASMSDVLSKKHESMVTTRQIMDSLQEMFGQPSIQIWHEAIKYVYNARMKEGQSVREHVFDMMVQFNVVETNG

Query:  AVIDEQSQVSFILESFPKSFLQFRSNAVMNKIEYTMTTLQTSYRLFSLL
        AVIDE SQVSFILES P+SFLQFRSNAVMNKI YT+TTL    + F  L
Subjt:  AVIDEQSQVSFILESFPKSFLQFRSNAVMNKIEYTMTTLQTSYRLFSLL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCTTCGTCTTAATGGAGGAATGTCCTCCTTCCCCTGTTCGAAAGCATCCCAGACCGTCAGGGATGCATATGACCGCTGGACAAAGGCCAATGAAAAGGCCCGAGTCTA
CATCTTGGCCAGTATGTCTGACGTACTGAGCAAGAAACATGAGTCCATGGTCACTACACGTCAGATCATGGACTCCCTCCAGGAGATGTTTGGACAACCGTCCATTCAAA
TCTGGCACGAGGCTATTAAATACGTTTATAATGCCCGTATGAAGGAAGGCCAATCTGTTAGAGAACATGTTTTTGACATGATGGTCCAATTCAACGTGGTAGAAACGAAC
GGGGCGGTCATTGACGAGCAAAGTCAGGTATCCTTTATCTTAGAATCTTTTCCGAAGAGCTTCCTTCAATTCCGTAGCAATGCGGTTATGAACAAGATAGAGTATACCAT
GACTACCCTCCAAACGAGTTACAGACTTTTCAGTCTCTTATGA
mRNA sequenceShow/hide mRNA sequence
ATGCTTCGTCTTAATGGAGGAATGTCCTCCTTCCCCTGTTCGAAAGCATCCCAGACCGTCAGGGATGCATATGACCGCTGGACAAAGGCCAATGAAAAGGCCCGAGTCTA
CATCTTGGCCAGTATGTCTGACGTACTGAGCAAGAAACATGAGTCCATGGTCACTACACGTCAGATCATGGACTCCCTCCAGGAGATGTTTGGACAACCGTCCATTCAAA
TCTGGCACGAGGCTATTAAATACGTTTATAATGCCCGTATGAAGGAAGGCCAATCTGTTAGAGAACATGTTTTTGACATGATGGTCCAATTCAACGTGGTAGAAACGAAC
GGGGCGGTCATTGACGAGCAAAGTCAGGTATCCTTTATCTTAGAATCTTTTCCGAAGAGCTTCCTTCAATTCCGTAGCAATGCGGTTATGAACAAGATAGAGTATACCAT
GACTACCCTCCAAACGAGTTACAGACTTTTCAGTCTCTTATGA
Protein sequenceShow/hide protein sequence
MLRLNGGMSSFPCSKASQTVRDAYDRWTKANEKARVYILASMSDVLSKKHESMVTTRQIMDSLQEMFGQPSIQIWHEAIKYVYNARMKEGQSVREHVFDMMVQFNVVETN
GAVIDEQSQVSFILESFPKSFLQFRSNAVMNKIEYTMTTLQTSYRLFSLL