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PI0000468 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0000468
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionAnkyrin repeat-containing protein
Genome locationchr03:5930603..5931074
RNA-Seq ExpressionPI0000468
SyntenyPI0000468
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR026961 - PGG domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6607507.1 hypothetical protein SDJN03_00849, partial [Cucurbita argyrosperma subsp. sororia]2.1e-1436.3Show/hide
Query:  REDTDFLMVVTTFIATVAFQIGTNPPGGVWQEDDKQGNG-----------------YLVTITACFVFSAMQFAVLFLKKWPVGAENWSLSRFILYLTMGL
        + D ++L++V TF+ATVAFQ G +PPGGVWQ+DDK  +                  ++V +T C + S +QF VLF++   + ++  SLSR  LY T+  
Subjt:  REDTDFLMVVTTFIATVAFQIGTNPPGGVWQEDDKQGNG-----------------YLVTITACFVFSAMQFAVLFLKKWPVGAENWSLSRFILYLTMGL

Query:  AISSMGIACGCSVRAYTPDSEENTRFVISFITMVGFPFGLAAISLY
        A+ SM  +   SV+AYTP S       +  +T +G       ISL+
Subjt:  AISSMGIACGCSVRAYTPDSEENTRFVISFITMVGFPFGLAAISLY

XP_008445596.1 PREDICTED: uncharacterized protein LOC103488576 [Cucumis melo]1.1e-6382.17Show/hide
Query:  MREDTDFLMVVTTFIATVAFQIGTNPPGGVWQEDDKQG-----------------NGYLVTITACFVFSAMQFAVLFLKKWPVGAENWSLSRFILYLTMG
        +REDTDFLMVVTTFIATVAFQIGTNPPGGVWQEDDKQG                 +GYLVTITACFVFSAMQFAVLFLKKWPVGA+NWS SRFILY TMG
Subjt:  MREDTDFLMVVTTFIATVAFQIGTNPPGGVWQEDDKQG-----------------NGYLVTITACFVFSAMQFAVLFLKKWPVGAENWSLSRFILYLTMG

Query:  LAISSMGIACGCSVRAYTPDSEENTRFVISFITMVGFPFGLAAISLYLQYFNKSSSS
        LAISSMGIA GCSVRAYTPDSEE TR+VISFITM+GFP GLAAISLYL+YFNKSSSS
Subjt:  LAISSMGIACGCSVRAYTPDSEENTRFVISFITMVGFPFGLAAISLYLQYFNKSSSS

XP_011657373.1 uncharacterized protein LOC105435852 [Cucumis sativus]4.6e-6280.25Show/hide
Query:  MREDTDFLMVVTTFIATVAFQIGTNPPGGVWQEDDKQGN-----------------GYLVTITACFVFSAMQFAVLFLKKWPVGAENWSLSRFILYLTMG
        MREDTDFLMVVTTFIATVAFQIGTNPPGGVWQEDDKQG                  G+LVTITACFVFSAMQFAVLFLKKWPVGA+NWS SRFILY TMG
Subjt:  MREDTDFLMVVTTFIATVAFQIGTNPPGGVWQEDDKQGN-----------------GYLVTITACFVFSAMQFAVLFLKKWPVGAENWSLSRFILYLTMG

Query:  LAISSMGIACGCSVRAYTPDSEENTRFVISFITMVGFPFGLAAISLYLQYFNKSSSS
        LA+SSMG A GCSVRAYTPDSEENT FVISFITM+GFP  LAAIS+YLQYF+KSSSS
Subjt:  LAISSMGIACGCSVRAYTPDSEENTRFVISFITMVGFPFGLAAISLYLQYFNKSSSS

XP_016899921.1 PREDICTED: uncharacterized protein LOC107990705 [Cucumis melo]1.3e-1639.31Show/hide
Query:  DTDFLMVVTTFIATVAFQIGTNPPGGVWQEDD----KQGNGYLVT------------ITACFVFSAMQFAVLFLKKWPVGAENWSLSRFILYLTMGLAIS
        D DFLMV TTFIA +AFQ GTNPPGGVWQ+D+    + G   + T            +T CF  SAMQF VL  K      ++WS+S+  +Y TMG  IS
Subjt:  DTDFLMVVTTFIATVAFQIGTNPPGGVWQEDD----KQGNGYLVT------------ITACFVFSAMQFAVLFLKKWPVGAENWSLSRFILYLTMGLAIS

Query:  SMGIACGCSVRAYTPDSEENTRFVISFITMVGFPFGLAAISLYLQ
        ++ +A   +++A TP+++ +   V+   T+V     +  IS+Y++
Subjt:  SMGIACGCSVRAYTPDSEENTRFVISFITMVGFPFGLAAISLYLQ

XP_022949196.1 uncharacterized protein LOC111452618 [Cucurbita moschata]1.1e-1537.16Show/hide
Query:  REDTDFLMVVTTFIATVAFQIGTNPPGGVWQEDDKQGN-----------------GYLVTITACFVFSAMQFAVLFLKKWPVGAENWSLSRFILYLTMGL
        + D ++L++V TF+ATVAFQ G +PPGGVWQ+DDK  +                  ++V +T C + S +QF VLF++   + ++  SLSR  LY T+  
Subjt:  REDTDFLMVVTTFIATVAFQIGTNPPGGVWQEDDKQGN-----------------GYLVTITACFVFSAMQFAVLFLKKWPVGAENWSLSRFILYLTMGL

Query:  AISSMGIACGCSVRAYTPDSEENTRFVISFITMVGFPFGLAAISLYLQ
        A+ SM  +   SV+AYTP+S       +  +T +G    L  ISL+ Q
Subjt:  AISSMGIACGCSVRAYTPDSEENTRFVISFITMVGFPFGLAAISLYLQ

TrEMBL top hitse value%identityAlignment
A0A0A0KGU1 PGG domain-containing protein2.2e-6280.25Show/hide
Query:  MREDTDFLMVVTTFIATVAFQIGTNPPGGVWQEDDKQGN-----------------GYLVTITACFVFSAMQFAVLFLKKWPVGAENWSLSRFILYLTMG
        MREDTDFLMVVTTFIATVAFQIGTNPPGGVWQEDDKQG                  G+LVTITACFVFSAMQFAVLFLKKWPVGA+NWS SRFILY TMG
Subjt:  MREDTDFLMVVTTFIATVAFQIGTNPPGGVWQEDDKQGN-----------------GYLVTITACFVFSAMQFAVLFLKKWPVGAENWSLSRFILYLTMG

Query:  LAISSMGIACGCSVRAYTPDSEENTRFVISFITMVGFPFGLAAISLYLQYFNKSSSS
        LA+SSMG A GCSVRAYTPDSEENT FVISFITM+GFP  LAAIS+YLQYF+KSSSS
Subjt:  LAISSMGIACGCSVRAYTPDSEENTRFVISFITMVGFPFGLAAISLYLQYFNKSSSS

A0A1S3BD33 uncharacterized protein LOC1034885765.3e-6482.17Show/hide
Query:  MREDTDFLMVVTTFIATVAFQIGTNPPGGVWQEDDKQG-----------------NGYLVTITACFVFSAMQFAVLFLKKWPVGAENWSLSRFILYLTMG
        +REDTDFLMVVTTFIATVAFQIGTNPPGGVWQEDDKQG                 +GYLVTITACFVFSAMQFAVLFLKKWPVGA+NWS SRFILY TMG
Subjt:  MREDTDFLMVVTTFIATVAFQIGTNPPGGVWQEDDKQG-----------------NGYLVTITACFVFSAMQFAVLFLKKWPVGAENWSLSRFILYLTMG

Query:  LAISSMGIACGCSVRAYTPDSEENTRFVISFITMVGFPFGLAAISLYLQYFNKSSSS
        LAISSMGIA GCSVRAYTPDSEE TR+VISFITM+GFP GLAAISLYL+YFNKSSSS
Subjt:  LAISSMGIACGCSVRAYTPDSEENTRFVISFITMVGFPFGLAAISLYLQYFNKSSSS

A0A1S4DVA8 uncharacterized protein LOC1079907056.4e-1739.31Show/hide
Query:  DTDFLMVVTTFIATVAFQIGTNPPGGVWQEDD----KQGNGYLVT------------ITACFVFSAMQFAVLFLKKWPVGAENWSLSRFILYLTMGLAIS
        D DFLMV TTFIA +AFQ GTNPPGGVWQ+D+    + G   + T            +T CF  SAMQF VL  K      ++WS+S+  +Y TMG  IS
Subjt:  DTDFLMVVTTFIATVAFQIGTNPPGGVWQEDD----KQGNGYLVT------------ITACFVFSAMQFAVLFLKKWPVGAENWSLSRFILYLTMGLAIS

Query:  SMGIACGCSVRAYTPDSEENTRFVISFITMVGFPFGLAAISLYLQ
        ++ +A   +++A TP+++ +   V+   T+V     +  IS+Y++
Subjt:  SMGIACGCSVRAYTPDSEENTRFVISFITMVGFPFGLAAISLYLQ

A0A5A7VAU9 Ankyrin repeat-containing protein5.3e-6482.17Show/hide
Query:  MREDTDFLMVVTTFIATVAFQIGTNPPGGVWQEDDKQG-----------------NGYLVTITACFVFSAMQFAVLFLKKWPVGAENWSLSRFILYLTMG
        +REDTDFLMVVTTFIATVAFQIGTNPPGGVWQEDDKQG                 +GYLVTITACFVFSAMQFAVLFLKKWPVGA+NWS SRFILY TMG
Subjt:  MREDTDFLMVVTTFIATVAFQIGTNPPGGVWQEDDKQG-----------------NGYLVTITACFVFSAMQFAVLFLKKWPVGAENWSLSRFILYLTMG

Query:  LAISSMGIACGCSVRAYTPDSEENTRFVISFITMVGFPFGLAAISLYLQYFNKSSSS
        LAISSMGIA GCSVRAYTPDSEE TR+VISFITM+GFP GLAAISLYL+YFNKSSSS
Subjt:  LAISSMGIACGCSVRAYTPDSEENTRFVISFITMVGFPFGLAAISLYLQYFNKSSSS

A0A6J1GBC1 uncharacterized protein LOC1114526185.4e-1637.16Show/hide
Query:  REDTDFLMVVTTFIATVAFQIGTNPPGGVWQEDDKQGN-----------------GYLVTITACFVFSAMQFAVLFLKKWPVGAENWSLSRFILYLTMGL
        + D ++L++V TF+ATVAFQ G +PPGGVWQ+DDK  +                  ++V +T C + S +QF VLF++   + ++  SLSR  LY T+  
Subjt:  REDTDFLMVVTTFIATVAFQIGTNPPGGVWQEDDKQGN-----------------GYLVTITACFVFSAMQFAVLFLKKWPVGAENWSLSRFILYLTMGL

Query:  AISSMGIACGCSVRAYTPDSEENTRFVISFITMVGFPFGLAAISLYLQ
        A+ SM  +   SV+AYTP+S       +  +T +G    L  ISL+ Q
Subjt:  AISSMGIACGCSVRAYTPDSEENTRFVISFITMVGFPFGLAAISLYLQ

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G13950.1 unknown protein6.1e-0460.71Show/hide
Query:  LMVVTTFIATVAFQIGTNPPGGVWQEDD
        LMV  T IA ++FQ+  NPPGGVWQ D+
Subjt:  LMVVTTFIATVAFQIGTNPPGGVWQEDD


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGAGAAGACACAGATTTTCTAATGGTAGTAACGACATTCATTGCAACCGTAGCATTTCAAATCGGGACGAACCCGCCGGGAGGCGTATGGCAAGAAGACGATAAACA
GGGGAATGGATATTTGGTAACAATTACAGCTTGCTTTGTGTTTTCAGCAATGCAATTTGCTGTTCTGTTCCTTAAGAAATGGCCAGTTGGTGCCGAAAATTGGTCACTTT
CAAGGTTCATTCTTTATTTAACTATGGGATTGGCCATTTCTTCCATGGGAATTGCTTGTGGGTGCTCTGTTAGAGCTTACACACCTGACTCAGAGGAAAATACTCGTTTT
GTTATTTCTTTTATTACTATGGTGGGATTTCCTTTTGGTTTGGCTGCCATTTCACTTTACTTACAATACTTTAATAAATCTTCATCTTCTTAA
mRNA sequenceShow/hide mRNA sequence
ATGAGAGAAGACACAGATTTTCTAATGGTAGTAACGACATTCATTGCAACCGTAGCATTTCAAATCGGGACGAACCCGCCGGGAGGCGTATGGCAAGAAGACGATAAACA
GGGGAATGGATATTTGGTAACAATTACAGCTTGCTTTGTGTTTTCAGCAATGCAATTTGCTGTTCTGTTCCTTAAGAAATGGCCAGTTGGTGCCGAAAATTGGTCACTTT
CAAGGTTCATTCTTTATTTAACTATGGGATTGGCCATTTCTTCCATGGGAATTGCTTGTGGGTGCTCTGTTAGAGCTTACACACCTGACTCAGAGGAAAATACTCGTTTT
GTTATTTCTTTTATTACTATGGTGGGATTTCCTTTTGGTTTGGCTGCCATTTCACTTTACTTACAATACTTTAATAAATCTTCATCTTCTTAA
Protein sequenceShow/hide protein sequence
MREDTDFLMVVTTFIATVAFQIGTNPPGGVWQEDDKQGNGYLVTITACFVFSAMQFAVLFLKKWPVGAENWSLSRFILYLTMGLAISSMGIACGCSVRAYTPDSEENTRF
VISFITMVGFPFGLAAISLYLQYFNKSSSS