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PI0000491 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0000491
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionMediator of RNA polymerase II transcription subunit 12-like isoform X1
Genome locationchr09:13906776..13906946
RNA-Seq ExpressionPI0000491
SyntenyPI0000491
Gene Ontology termsGO:0010073 - meristem maintenance (biological process)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0040602.1 mediator of RNA polymerase II transcription subunit 12-like isoform X1 [Cucumis melo var. makuwa]7.6e-0864.29Show/hide
Query:  MDMNGVVENITNIYTMKHLQRYQTHKSTNKNQRIKRSQSNIEFKVDGNIQLEIDDV
        MD +  + NI NI  MKHLQ YQ  KSTNKNQR KR+++NIE +VD N QLEIDDV
Subjt:  MDMNGVVENITNIYTMKHLQRYQTHKSTNKNQRIKRSQSNIEFKVDGNIQLEIDDV
KAA0041168.1 serine/threonine-protein phosphatase 7 long form-like protein [Cucumis melo var. makuwa]2.5e-0666.67Show/hide
Query:  NITNIYTMKHLQRYQTHKSTNKNQRIKRSQSNIEFKVDGNIQLEIDDV
        NITNI  MKHLQ YQ  KSTNKNQR KR+++NIEF+V+ + QL+ID+V
Subjt:  NITNIYTMKHLQRYQTHKSTNKNQRIKRSQSNIEFKVDGNIQLEIDDV
KAA0066693.1 mediator of RNA polymerase II transcription subunit 12-like isoform X1 [Cucumis melo var. makuwa]2.4e-0967.86Show/hide
Query:  MDMNGVVENITNIYTMKHLQRYQTHKSTNKNQRIKRSQSNIEFKVDGNIQLEIDDV
        MDM+  + NITNI  MKHLQ YQ  KSTNKNQR KR+++NIEF+VD + QLEIDDV
Subjt:  MDMNGVVENITNIYTMKHLQRYQTHKSTNKNQRIKRSQSNIEFKVDGNIQLEIDDV
TrEMBL top hitse value%identityAlignment
A0A5A7TDY5 Serine/threonine-protein phosphatase 7 long form-like protein1.2e-0666.67Show/hide
Query:  NITNIYTMKHLQRYQTHKSTNKNQRIKRSQSNIEFKVDGNIQLEIDDV
        NITNI  MKHLQ YQ  KSTNKNQR KR+++NIEF+V+ + QL+ID+V
Subjt:  NITNIYTMKHLQRYQTHKSTNKNQRIKRSQSNIEFKVDGNIQLEIDDV
A0A5A7TI03 Stress-response A/B barrel domain-containing protein5.5e-0475Show/hide
Query:  RYQTHKSTNKNQRIKRSQSNIEFKVDGNIQLEIDDV
        RYQ  KSTNKNQR KR+Q+NIEFKVD + QLEIDD+
Subjt:  RYQTHKSTNKNQRIKRSQSNIEFKVDGNIQLEIDDV
A0A5A7VF64 Mediator of RNA polymerase II transcription subunit 12-like isoform X11.2e-0967.86Show/hide
Query:  MDMNGVVENITNIYTMKHLQRYQTHKSTNKNQRIKRSQSNIEFKVDGNIQLEIDDV
        MDM+  + NITNI  MKHLQ YQ  KSTNKNQR KR+++NIEF+VD + QLEIDDV
Subjt:  MDMNGVVENITNIYTMKHLQRYQTHKSTNKNQRIKRSQSNIEFKVDGNIQLEIDDV
A0A5D3C2V9 Mediator of RNA polymerase II transcription subunit 12-like isoform X13.7e-0864.29Show/hide
Query:  MDMNGVVENITNIYTMKHLQRYQTHKSTNKNQRIKRSQSNIEFKVDGNIQLEIDDV
        MD +  + NI NI  MKHLQ YQ  KSTNKNQR KR+++NIE +VD N QLEIDDV
Subjt:  MDMNGVVENITNIYTMKHLQRYQTHKSTNKNQRIKRSQSNIEFKVDGNIQLEIDDV
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGACATGAATGGGGTCGTTGAAAACATAACAAATATCTATACTATGAAGCACCTGCAAAGGTATCAGACCCACAAGAGTACTAACAAGAACCAAAGAATCAAGAGGAG
CCAGAGCAACATAGAGTTCAAAGTCGACGGCAACATCCAGCTGGAAATCGATGACGTCTGA
mRNA sequenceShow/hide mRNA sequence
ATGGACATGAATGGGGTCGTTGAAAACATAACAAATATCTATACTATGAAGCACCTGCAAAGGTATCAGACCCACAAGAGTACTAACAAGAACCAAAGAATCAAGAGGAG
CCAGAGCAACATAGAGTTCAAAGTCGACGGCAACATCCAGCTGGAAATCGATGACGTCTGA
Protein sequenceShow/hide protein sequence
MDMNGVVENITNIYTMKHLQRYQTHKSTNKNQRIKRSQSNIEFKVDGNIQLEIDDV