CuGenDBv2

Gene ID	PI0000502
Organism	Cucumis metuliferus PI 482460 (Melon (PI 482460) v1)
Description	DNA polymerase delta small subunit
Genome location	chr04:6363835..6370820
RNA-Seq Expression	PI0000502
Synteny	PI0000502
Gene Ontology terms	GO:0006271 - DNA strand elongation involved in DNA replication (biological process) GO:0016021 - integral component of membrane (cellular component) GO:0043625 - delta DNA polymerase complex (cellular component) GO:0003677 - DNA binding (molecular function)
InterPro domains	IPR007185 - DNA polymerase alpha/delta/epsilon, subunit B IPR024826 - DNA polymerase delta/II small subunit family IPR040663 - DNA polymerase delta subunit, OB-fold domain IPR041863 - DNA polymerase delta subunit 2, C-terminal domain

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

TYK25400.1 DNA polymerase delta small subunit [Cucumis melo var. makuwa]

1.4e-242

88.57

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Query:  MEIDSLKILYRKQCTYEISDEQYKIQKETYKGQQYSHIYFARLHLMRTILHSLVSNWKPHLPVSTVLGLEEGKECVIVGTVYKHMKLKPTILDEYSKERS
        MEIDS K ++RKQC YEISDEQYKIQKETYKGQQYSHIYFARLHLMRTILHSLVSNWKPHLPVSTVLGLEEGKECVIVGTVYKHMKLKPTILDEYSKERS
Subjt:  MEIDSLKILYRKQCTYEISDEQYKIQKETYKGQQYSHIYFARLHLMRTILHSLVSNWKPHLPVSTVLGLEEGKECVIVGTVYKHMKLKPTILDEYSKERS

Query:  ATPLVKPHNFVHPDDHLVLEDESGRVKLSGDVLLPSVYVTGTVLALHGKETCVGDFLVLDILEADLPPQIERPLISSEDKYVIFVSGLSIGSSISNPLQF
        A PLVKPHNF+HPDDHLVLEDESGRVKLSGDVLLPSVYVTG VLALHGKET VGDFLVLDILEADLPPQIERPLISSEDKYVIFVSGLSIGSSISNPLQF
Subjt:  ATPLVKPHNFVHPDDHLVLEDESGRVKLSGDVLLPSVYVTGTVLALHGKETCVGDFLVLDILEADLPPQIERPLISSEDKYVIFVSGLSIGSSISNPLQF

Query:  QLLVDHITGHLGDEKEQGIAAQIVHVVICGNSVEIPRGILNGQHLSAKDQTKLTEPLKELDILLNQLAAGLPVDIMPGSSDPANFSLPQQPLHRCLFPGS
        QLLVDHITGHLGDEKEQGIAAQIVHVVICGNSVEIPRGILNGQHLSAKDQTKLTEPLKELDI LNQLAAGLPVDIMPGSSDPANFSLPQQPLHRCLFPGS
Subjt:  QLLVDHITGHLGDEKEQGIAAQIVHVVICGNSVEIPRGILNGQHLSAKDQTKLTEPLKELDILLNQLAAGLPVDIMPGSSDPANFSLPQQPLHRCLFPGS

Query:  SAYNTFRSCTNPHCFELDNFRQSFGFRFLGTSGQNVDDLEKYSEAKDKLEFMERTLRWRHLAPTAPNTLGCYPFTDRDPFLIETCPHVYFIGNQDKFDTR
        SAYNTFRSCTNPHCFELDN       RFLGTSGQNVDDLEKYSEAKDKLEFMERTLRWRHLAPTAPNTLGCYPFTDRDPFLIE+CPHVYFIGNQDKFDTR
Subjt:  SAYNTFRSCTNPHCFELDNFRQSFGFRFLGTSGQNVDDLEKYSEAKDKLEFMERTLRWRHLAPTAPNTLGCYPFTDRDPFLIETCPHVYFIGNQDKFDTR

Query:  LIKGAEGQMVRLIAIPRFCETGIAVM-------------------------------------LNLRNLECHTLSFGTEFS
        LIKGAEGQMVRLIAIPRFCETGIAVM                                     LNLRNLECHTLSFGTEFS
Subjt:  LIKGAEGQMVRLIAIPRFCETGIAVM-------------------------------------LNLRNLECHTLSFGTEFS

XP_004136567.1 DNA polymerase delta small subunit [Cucumis sativus]

1.8e-248

95.72

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Query:  MEIDSLKILYRKQCTYEISDEQYKIQKETYKGQQYSHIYFARLHLMRTILHSLVSNWKPHLPVSTVLGLEEGKECVIVGTVYKHMKLKPTILDEYSKERS
        MEIDSL  ++RKQCTYE+SDEQYKIQKETYKGQQYSHIYFARLHLMRTILHSLVSNWKPHLPVSTVLGLEEGKECVIVGTVYKHMKLKPTILDEYSKERS
Subjt:  MEIDSLKILYRKQCTYEISDEQYKIQKETYKGQQYSHIYFARLHLMRTILHSLVSNWKPHLPVSTVLGLEEGKECVIVGTVYKHMKLKPTILDEYSKERS

Query:  ATPLVKPHNFVHPDDHLVLEDESGRVKLSGDVLLPSVYVTGTVLALHGKETCVGDFLVLDILEADLPPQIERPLISSEDKYVIFVSGLSIGSSISNPLQF
        A PLVKPHNF+HPDDHLVLEDESGRVKLSGDVLLPSVYVTG VLALHGKET VGDFLVLDILEADLPPQIERPLISSEDKYVIFVSGLSIGSSISNPLQF
Subjt:  ATPLVKPHNFVHPDDHLVLEDESGRVKLSGDVLLPSVYVTGTVLALHGKETCVGDFLVLDILEADLPPQIERPLISSEDKYVIFVSGLSIGSSISNPLQF

Query:  QLLVDHITGHLGDEKEQGIAAQIVHVVICGNSVEIPRGILNGQHLSAKDQTKLTEPLKELDILLNQLAAGLPVDIMPGSSDPANFSLPQQPLHRCLFPGS
        QLLVDHITGHLGDEKEQGIAAQIVHVVICGNSVEIPRGILNGQHLSAKDQTKLTEPLKELDILLNQLAAGLPVDIMPGSSDPANFSLPQQPLHRCLFPGS
Subjt:  QLLVDHITGHLGDEKEQGIAAQIVHVVICGNSVEIPRGILNGQHLSAKDQTKLTEPLKELDILLNQLAAGLPVDIMPGSSDPANFSLPQQPLHRCLFPGS

Query:  SAYNTFRSCTNPHCFELDNFRQSFGFRFLGTSGQNVDDLEKYSEAKDKLEFMERTLRWRHLAPTAPNTLGCYPFTDRDPFLIETCPHVYFIGNQDKFDTR
        SAYNTFRSCTNPHCFELDN      FRFLGTSGQNVDDLEKYSEAKDKLEFMERTLRWRHLAPTAPNTLGCYPFTDRDPFLIE+CPHVYFIGNQ+KFDTR
Subjt:  SAYNTFRSCTNPHCFELDNFRQSFGFRFLGTSGQNVDDLEKYSEAKDKLEFMERTLRWRHLAPTAPNTLGCYPFTDRDPFLIETCPHVYFIGNQDKFDTR

Query:  LIKGAEGQMVRLIAIPRFCETGIAVMLNLRNLECHTLSFGTEFS
        L+KGAEGQMVRLIAIPRFCETGIAVMLNLRNLECHTLS GTEFS
Subjt:  LIKGAEGQMVRLIAIPRFCETGIAVMLNLRNLECHTLSFGTEFS

XP_008443055.1 PREDICTED: DNA polymerase delta small subunit [Cucumis melo]

3.9e-248

95.95

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Query:  MEIDSLKILYRKQCTYEISDEQYKIQKETYKGQQYSHIYFARLHLMRTILHSLVSNWKPHLPVSTVLGLEEGKECVIVGTVYKHMKLKPTILDEYSKERS
        MEIDS K ++RKQC YEISDEQYKIQKETYKGQQYSHIYFARLHLMRTILHSLVSNWKPHLPVSTVLGLEEGKECVIVGTVYKHMKLKPTILDEYSKERS
Subjt:  MEIDSLKILYRKQCTYEISDEQYKIQKETYKGQQYSHIYFARLHLMRTILHSLVSNWKPHLPVSTVLGLEEGKECVIVGTVYKHMKLKPTILDEYSKERS

Query:  ATPLVKPHNFVHPDDHLVLEDESGRVKLSGDVLLPSVYVTGTVLALHGKETCVGDFLVLDILEADLPPQIERPLISSEDKYVIFVSGLSIGSSISNPLQF
        A PLVKPHNF+HPDDHLVLEDESGRVKLSGDVLLPSVYVTG VLALHGKET VGDFLVLDILEADLPPQIERPLISSEDKYVIFVSGLSIGSSISNPLQF
Subjt:  ATPLVKPHNFVHPDDHLVLEDESGRVKLSGDVLLPSVYVTGTVLALHGKETCVGDFLVLDILEADLPPQIERPLISSEDKYVIFVSGLSIGSSISNPLQF

Query:  QLLVDHITGHLGDEKEQGIAAQIVHVVICGNSVEIPRGILNGQHLSAKDQTKLTEPLKELDILLNQLAAGLPVDIMPGSSDPANFSLPQQPLHRCLFPGS
        QLLVDHITGHLGDEKEQGIAAQIVHVVICGNSVEIPRGILNGQHLSAKDQTKLTEPLKELDI LNQLAAGLPVDIMPGSSDPANFSLPQQPLHRCLFPGS
Subjt:  QLLVDHITGHLGDEKEQGIAAQIVHVVICGNSVEIPRGILNGQHLSAKDQTKLTEPLKELDILLNQLAAGLPVDIMPGSSDPANFSLPQQPLHRCLFPGS

Query:  SAYNTFRSCTNPHCFELDNFRQSFGFRFLGTSGQNVDDLEKYSEAKDKLEFMERTLRWRHLAPTAPNTLGCYPFTDRDPFLIETCPHVYFIGNQDKFDTR
        SAYNTFRSCTNPHCFELDN       RFLGTSGQNVDDLEKYSEAKDKLEFMERTLRWRHLAPTAPNTLGCYPFTDRDPFLIE+CPHVYFIGNQDKFDTR
Subjt:  SAYNTFRSCTNPHCFELDNFRQSFGFRFLGTSGQNVDDLEKYSEAKDKLEFMERTLRWRHLAPTAPNTLGCYPFTDRDPFLIETCPHVYFIGNQDKFDTR

Query:  LIKGAEGQMVRLIAIPRFCETGIAVMLNLRNLECHTLSFGTEFS
        LIKGAEGQMVRLIAIPRFCETGIAVMLNLRNLECHTLSFGTEFS
Subjt:  LIKGAEGQMVRLIAIPRFCETGIAVMLNLRNLECHTLSFGTEFS

XP_038906224.1 DNA polymerase delta small subunit isoform X1 [Benincasa hispida]

1.8e-240

89.87

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Query:  MEIDSLKILYRKQCTYEISDEQYKIQKETYKGQQYSHIYFARLHLMRTILHSLVSNWKPHLPVSTVLGLEEGKECVIVGTVYKHMKLKPTILDEYSKERS
        MEIDSLK L RKQCTYEI DEQYKIQKETYKGQQYSHIYFARLHLMRTILHSLVS WKPHLPV TVLGLEEGKECVIVGTVYKHMKLKPTILDEYSKERS
Subjt:  MEIDSLKILYRKQCTYEISDEQYKIQKETYKGQQYSHIYFARLHLMRTILHSLVSNWKPHLPVSTVLGLEEGKECVIVGTVYKHMKLKPTILDEYSKERS

Query:  ATPLVKPHNFVHPDDHLVLEDESGRVKLSGDVLLPSVYVTGTVLALHGKETCVGDFLVLDILEADLPPQIERPLIS--------------------SEDK
        A PLV+PHNF+HPDDHLVLEDESGRVKLSG VLLPSVYVTG VLAL GKETCVGDFLVLDILEA LPPQIERPLIS                     EDK
Subjt:  ATPLVKPHNFVHPDDHLVLEDESGRVKLSGDVLLPSVYVTGTVLALHGKETCVGDFLVLDILEADLPPQIERPLIS--------------------SEDK

Query:  YVIFVSGLSIGSSISNPLQFQLLVDHITGHLGDEKEQGIAAQIVHVVICGNSVEIPRGILNGQHLSAKDQTKLTEPLKELDILLNQLAAGLPVDIMPGSS
        YVIFVSG+SIGSSISNPLQFQLLVDHITGHLGDEKEQGIAAQIVHVVICGNSVEIPRGILNGQHLSAKDQTKLTEPLKELDILLNQ+A GLPVDIMPGSS
Subjt:  YVIFVSGLSIGSSISNPLQFQLLVDHITGHLGDEKEQGIAAQIVHVVICGNSVEIPRGILNGQHLSAKDQTKLTEPLKELDILLNQLAAGLPVDIMPGSS

Query:  DPANFSLPQQPLHRCLFPGSSAYNTFRSCTNPHCFELDNFRQSFGFRFLGTSGQNVDDLEKYSEAKDKLEFMERTLRWRHLAPTAPNTLGCYPFTDRDPF
        DPANFSLPQQPLHRCL PGSSAYNTFRSCTNPHCFELDN      FRFLGTSGQN+DDLEKYSEAKDKLEFMERTLRWRHLAPTAPNTLGCYPFTDRDPF
Subjt:  DPANFSLPQQPLHRCLFPGSSAYNTFRSCTNPHCFELDNFRQSFGFRFLGTSGQNVDDLEKYSEAKDKLEFMERTLRWRHLAPTAPNTLGCYPFTDRDPF

Query:  LIETCPHVYFIGNQDKFDTRLIKGAEGQMVRLIAIPRFCETGIAVMLNLRNLECHTLSFGTEFS
        LIE+CPHVYFIGNQDKFDTRLIKGAEGQMVRLIAIPRFCE G+AVMLNLRNLECHTLSFGTEFS
Subjt:  LIETCPHVYFIGNQDKFDTRLIKGAEGQMVRLIAIPRFCETGIAVMLNLRNLECHTLSFGTEFS

XP_038906226.1 DNA polymerase delta small subunit isoform X3 [Benincasa hispida]

1.5e-244

94.14

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Query:  MEIDSLKILYRKQCTYEISDEQYKIQKETYKGQQYSHIYFARLHLMRTILHSLVSNWKPHLPVSTVLGLEEGKECVIVGTVYKHMKLKPTILDEYSKERS
        MEIDSLK L RKQCTYEI DEQYKIQKETYKGQQYSHIYFARLHLMRTILHSLVS WKPHLPV TVLGLEEGKECVIVGTVYKHMKLKPTILDEYSKERS
Subjt:  MEIDSLKILYRKQCTYEISDEQYKIQKETYKGQQYSHIYFARLHLMRTILHSLVSNWKPHLPVSTVLGLEEGKECVIVGTVYKHMKLKPTILDEYSKERS

Query:  ATPLVKPHNFVHPDDHLVLEDESGRVKLSGDVLLPSVYVTGTVLALHGKETCVGDFLVLDILEADLPPQIERPLISSEDKYVIFVSGLSIGSSISNPLQF
        A PLV+PHNF+HPDDHLVLEDESGRVKLSG VLLPSVYVTG VLAL GKETCVGDFLVLDILEA LPPQIERPLISSEDKYVIFVSG+SIGSSISNPLQF
Subjt:  ATPLVKPHNFVHPDDHLVLEDESGRVKLSGDVLLPSVYVTGTVLALHGKETCVGDFLVLDILEADLPPQIERPLISSEDKYVIFVSGLSIGSSISNPLQF

Query:  QLLVDHITGHLGDEKEQGIAAQIVHVVICGNSVEIPRGILNGQHLSAKDQTKLTEPLKELDILLNQLAAGLPVDIMPGSSDPANFSLPQQPLHRCLFPGS
        QLLVDHITGHLGDEKEQGIAAQIVHVVICGNSVEIPRGILNGQHLSAKDQTKLTEPLKELDILLNQ+A GLPVDIMPGSSDPANFSLPQQPLHRCL PGS
Subjt:  QLLVDHITGHLGDEKEQGIAAQIVHVVICGNSVEIPRGILNGQHLSAKDQTKLTEPLKELDILLNQLAAGLPVDIMPGSSDPANFSLPQQPLHRCLFPGS

Query:  SAYNTFRSCTNPHCFELDNFRQSFGFRFLGTSGQNVDDLEKYSEAKDKLEFMERTLRWRHLAPTAPNTLGCYPFTDRDPFLIETCPHVYFIGNQDKFDTR
        SAYNTFRSCTNPHCFELDN      FRFLGTSGQN+DDLEKYSEAKDKLEFMERTLRWRHLAPTAPNTLGCYPFTDRDPFLIE+CPHVYFIGNQDKFDTR
Subjt:  SAYNTFRSCTNPHCFELDNFRQSFGFRFLGTSGQNVDDLEKYSEAKDKLEFMERTLRWRHLAPTAPNTLGCYPFTDRDPFLIETCPHVYFIGNQDKFDTR

Query:  LIKGAEGQMVRLIAIPRFCETGIAVMLNLRNLECHTLSFGTEFS
        LIKGAEGQMVRLIAIPRFCE G+AVMLNLRNLECHTLSFGTEFS
Subjt:  LIKGAEGQMVRLIAIPRFCETGIAVMLNLRNLECHTLSFGTEFS

TrEMBL top hits

e value

%identity

Alignment

A0A0A0LF21 Uncharacterized protein

8.5e-249

95.72

Show/hide

Query:  MEIDSLKILYRKQCTYEISDEQYKIQKETYKGQQYSHIYFARLHLMRTILHSLVSNWKPHLPVSTVLGLEEGKECVIVGTVYKHMKLKPTILDEYSKERS
        MEIDSL  ++RKQCTYE+SDEQYKIQKETYKGQQYSHIYFARLHLMRTILHSLVSNWKPHLPVSTVLGLEEGKECVIVGTVYKHMKLKPTILDEYSKERS
Subjt:  MEIDSLKILYRKQCTYEISDEQYKIQKETYKGQQYSHIYFARLHLMRTILHSLVSNWKPHLPVSTVLGLEEGKECVIVGTVYKHMKLKPTILDEYSKERS

Query:  ATPLVKPHNFVHPDDHLVLEDESGRVKLSGDVLLPSVYVTGTVLALHGKETCVGDFLVLDILEADLPPQIERPLISSEDKYVIFVSGLSIGSSISNPLQF
        A PLVKPHNF+HPDDHLVLEDESGRVKLSGDVLLPSVYVTG VLALHGKET VGDFLVLDILEADLPPQIERPLISSEDKYVIFVSGLSIGSSISNPLQF
Subjt:  ATPLVKPHNFVHPDDHLVLEDESGRVKLSGDVLLPSVYVTGTVLALHGKETCVGDFLVLDILEADLPPQIERPLISSEDKYVIFVSGLSIGSSISNPLQF

Query:  QLLVDHITGHLGDEKEQGIAAQIVHVVICGNSVEIPRGILNGQHLSAKDQTKLTEPLKELDILLNQLAAGLPVDIMPGSSDPANFSLPQQPLHRCLFPGS
        QLLVDHITGHLGDEKEQGIAAQIVHVVICGNSVEIPRGILNGQHLSAKDQTKLTEPLKELDILLNQLAAGLPVDIMPGSSDPANFSLPQQPLHRCLFPGS
Subjt:  QLLVDHITGHLGDEKEQGIAAQIVHVVICGNSVEIPRGILNGQHLSAKDQTKLTEPLKELDILLNQLAAGLPVDIMPGSSDPANFSLPQQPLHRCLFPGS

Query:  SAYNTFRSCTNPHCFELDNFRQSFGFRFLGTSGQNVDDLEKYSEAKDKLEFMERTLRWRHLAPTAPNTLGCYPFTDRDPFLIETCPHVYFIGNQDKFDTR
        SAYNTFRSCTNPHCFELDN      FRFLGTSGQNVDDLEKYSEAKDKLEFMERTLRWRHLAPTAPNTLGCYPFTDRDPFLIE+CPHVYFIGNQ+KFDTR
Subjt:  SAYNTFRSCTNPHCFELDNFRQSFGFRFLGTSGQNVDDLEKYSEAKDKLEFMERTLRWRHLAPTAPNTLGCYPFTDRDPFLIETCPHVYFIGNQDKFDTR

Query:  LIKGAEGQMVRLIAIPRFCETGIAVMLNLRNLECHTLSFGTEFS
        L+KGAEGQMVRLIAIPRFCETGIAVMLNLRNLECHTLS GTEFS
Subjt:  LIKGAEGQMVRLIAIPRFCETGIAVMLNLRNLECHTLSFGTEFS

A0A1S3B7Y0 DNA polymerase delta small subunit

1.9e-248

95.95

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Query:  MEIDSLKILYRKQCTYEISDEQYKIQKETYKGQQYSHIYFARLHLMRTILHSLVSNWKPHLPVSTVLGLEEGKECVIVGTVYKHMKLKPTILDEYSKERS
        MEIDS K ++RKQC YEISDEQYKIQKETYKGQQYSHIYFARLHLMRTILHSLVSNWKPHLPVSTVLGLEEGKECVIVGTVYKHMKLKPTILDEYSKERS
Subjt:  MEIDSLKILYRKQCTYEISDEQYKIQKETYKGQQYSHIYFARLHLMRTILHSLVSNWKPHLPVSTVLGLEEGKECVIVGTVYKHMKLKPTILDEYSKERS

Query:  ATPLVKPHNFVHPDDHLVLEDESGRVKLSGDVLLPSVYVTGTVLALHGKETCVGDFLVLDILEADLPPQIERPLISSEDKYVIFVSGLSIGSSISNPLQF
        A PLVKPHNF+HPDDHLVLEDESGRVKLSGDVLLPSVYVTG VLALHGKET VGDFLVLDILEADLPPQIERPLISSEDKYVIFVSGLSIGSSISNPLQF
Subjt:  ATPLVKPHNFVHPDDHLVLEDESGRVKLSGDVLLPSVYVTGTVLALHGKETCVGDFLVLDILEADLPPQIERPLISSEDKYVIFVSGLSIGSSISNPLQF

Query:  QLLVDHITGHLGDEKEQGIAAQIVHVVICGNSVEIPRGILNGQHLSAKDQTKLTEPLKELDILLNQLAAGLPVDIMPGSSDPANFSLPQQPLHRCLFPGS
        QLLVDHITGHLGDEKEQGIAAQIVHVVICGNSVEIPRGILNGQHLSAKDQTKLTEPLKELDI LNQLAAGLPVDIMPGSSDPANFSLPQQPLHRCLFPGS
Subjt:  QLLVDHITGHLGDEKEQGIAAQIVHVVICGNSVEIPRGILNGQHLSAKDQTKLTEPLKELDILLNQLAAGLPVDIMPGSSDPANFSLPQQPLHRCLFPGS

Query:  SAYNTFRSCTNPHCFELDNFRQSFGFRFLGTSGQNVDDLEKYSEAKDKLEFMERTLRWRHLAPTAPNTLGCYPFTDRDPFLIETCPHVYFIGNQDKFDTR
        SAYNTFRSCTNPHCFELDN       RFLGTSGQNVDDLEKYSEAKDKLEFMERTLRWRHLAPTAPNTLGCYPFTDRDPFLIE+CPHVYFIGNQDKFDTR
Subjt:  SAYNTFRSCTNPHCFELDNFRQSFGFRFLGTSGQNVDDLEKYSEAKDKLEFMERTLRWRHLAPTAPNTLGCYPFTDRDPFLIETCPHVYFIGNQDKFDTR

Query:  LIKGAEGQMVRLIAIPRFCETGIAVMLNLRNLECHTLSFGTEFS
        LIKGAEGQMVRLIAIPRFCETGIAVMLNLRNLECHTLSFGTEFS
Subjt:  LIKGAEGQMVRLIAIPRFCETGIAVMLNLRNLECHTLSFGTEFS

A0A5A7TKC4 DNA polymerase delta small subunit

2.6e-237

95.55

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Query:  MEIDSLKILYRKQCTYEISDEQYKIQKETYKGQQYSHIYFARLHLMRTILHSLVSNWKPHLPVSTVLGLEEGKECVIVGTVYKHMKLKPTILDEYSKERS
        MEIDS K ++RKQC YEISDEQYKIQKETYKGQQYSHIYFARLHLMRTILHSLVSNWKPHLPVSTVLGLEEGKECVIVGTVYKHMKLKPTILDEYSKERS
Subjt:  MEIDSLKILYRKQCTYEISDEQYKIQKETYKGQQYSHIYFARLHLMRTILHSLVSNWKPHLPVSTVLGLEEGKECVIVGTVYKHMKLKPTILDEYSKERS

Query:  ATPLVKPHNFVHPDDHLVLEDESGRVKLSGDVLLPSVYVTGTVLALHGKETCVGDFLVLDILEADLPPQIERPLISSEDKYVIFVSGLSIGSSISNPLQF
        A PLVKPHNF+HPDDHLVLEDESGRVKLSGDVLLPSVYVTG VLALHGKET VGDFLVLDILEADLPPQIERPLISSEDKYVIFVSGLSIGSSISNPLQF
Subjt:  ATPLVKPHNFVHPDDHLVLEDESGRVKLSGDVLLPSVYVTGTVLALHGKETCVGDFLVLDILEADLPPQIERPLISSEDKYVIFVSGLSIGSSISNPLQF

Query:  QLLVDHITGHLGDEKEQGIAAQIVHVVICGNSVEIPRGILNGQHLSAKDQTKLTEPLKELDILLNQLAAGLPVDIMPGSSDPANFSLPQQPLHRCLFPGS
        QLLVDHITGHLGDEKEQGIAAQIVHVVICGNSVEIPRGILNGQHLSAKDQTKLTEPLKELDI LNQLAAGLPVDIMPGSSDPANFSLPQQPLHRCLFPGS
Subjt:  QLLVDHITGHLGDEKEQGIAAQIVHVVICGNSVEIPRGILNGQHLSAKDQTKLTEPLKELDILLNQLAAGLPVDIMPGSSDPANFSLPQQPLHRCLFPGS

Query:  SAYNTFRSCTNPHCFELDNFRQSFGFRFLGTSGQNVDDLEKYSEAKDKLEFMERTLRWRHLAPTAPNTLGCYPFTDRDPFLIETCPHVYFIGNQDKFDTR
        SAYNTFRSCTNPHCFELDN       RFLGTSGQNVDDLEKYSEAKDKLEFMERTLRWRHLAPTAPNTLGCYPFTDRDPFLIE+CPHVYFIGNQDKFDTR
Subjt:  SAYNTFRSCTNPHCFELDNFRQSFGFRFLGTSGQNVDDLEKYSEAKDKLEFMERTLRWRHLAPTAPNTLGCYPFTDRDPFLIETCPHVYFIGNQDKFDTR

Query:  LIKGAEGQMVRLIAIPRFCETGIAVML
        LIKGAEGQMVRLIAIPRFCETGIAVM+
Subjt:  LIKGAEGQMVRLIAIPRFCETGIAVML

A0A5D3DQ54 DNA polymerase delta small subunit

7.0e-243

88.57

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Query:  MEIDSLKILYRKQCTYEISDEQYKIQKETYKGQQYSHIYFARLHLMRTILHSLVSNWKPHLPVSTVLGLEEGKECVIVGTVYKHMKLKPTILDEYSKERS
        MEIDS K ++RKQC YEISDEQYKIQKETYKGQQYSHIYFARLHLMRTILHSLVSNWKPHLPVSTVLGLEEGKECVIVGTVYKHMKLKPTILDEYSKERS
Subjt:  MEIDSLKILYRKQCTYEISDEQYKIQKETYKGQQYSHIYFARLHLMRTILHSLVSNWKPHLPVSTVLGLEEGKECVIVGTVYKHMKLKPTILDEYSKERS

Query:  ATPLVKPHNFVHPDDHLVLEDESGRVKLSGDVLLPSVYVTGTVLALHGKETCVGDFLVLDILEADLPPQIERPLISSEDKYVIFVSGLSIGSSISNPLQF
        A PLVKPHNF+HPDDHLVLEDESGRVKLSGDVLLPSVYVTG VLALHGKET VGDFLVLDILEADLPPQIERPLISSEDKYVIFVSGLSIGSSISNPLQF
Subjt:  ATPLVKPHNFVHPDDHLVLEDESGRVKLSGDVLLPSVYVTGTVLALHGKETCVGDFLVLDILEADLPPQIERPLISSEDKYVIFVSGLSIGSSISNPLQF

Query:  QLLVDHITGHLGDEKEQGIAAQIVHVVICGNSVEIPRGILNGQHLSAKDQTKLTEPLKELDILLNQLAAGLPVDIMPGSSDPANFSLPQQPLHRCLFPGS
        QLLVDHITGHLGDEKEQGIAAQIVHVVICGNSVEIPRGILNGQHLSAKDQTKLTEPLKELDI LNQLAAGLPVDIMPGSSDPANFSLPQQPLHRCLFPGS
Subjt:  QLLVDHITGHLGDEKEQGIAAQIVHVVICGNSVEIPRGILNGQHLSAKDQTKLTEPLKELDILLNQLAAGLPVDIMPGSSDPANFSLPQQPLHRCLFPGS

Query:  SAYNTFRSCTNPHCFELDNFRQSFGFRFLGTSGQNVDDLEKYSEAKDKLEFMERTLRWRHLAPTAPNTLGCYPFTDRDPFLIETCPHVYFIGNQDKFDTR
        SAYNTFRSCTNPHCFELDN       RFLGTSGQNVDDLEKYSEAKDKLEFMERTLRWRHLAPTAPNTLGCYPFTDRDPFLIE+CPHVYFIGNQDKFDTR
Subjt:  SAYNTFRSCTNPHCFELDNFRQSFGFRFLGTSGQNVDDLEKYSEAKDKLEFMERTLRWRHLAPTAPNTLGCYPFTDRDPFLIETCPHVYFIGNQDKFDTR

Query:  LIKGAEGQMVRLIAIPRFCETGIAVM-------------------------------------LNLRNLECHTLSFGTEFS
        LIKGAEGQMVRLIAIPRFCETGIAVM                                     LNLRNLECHTLSFGTEFS
Subjt:  LIKGAEGQMVRLIAIPRFCETGIAVM-------------------------------------LNLRNLECHTLSFGTEFS

A0A6J1J5X9 DNA polymerase delta small subunit

2.0e-234

89.64

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Query:  MEIDSLKILYRKQCTYEISDEQYKIQKETYKGQQYSHIYFARLHLMRTILHSLVSNWKPHLPVSTVLGLEEGKECVIVGTVYKHMKLKPTILDEYSKERS
        MEIDS K L RKQCTYEI DEQYKIQKETYKGQQYSHIYF RLHL+RTILHSLVS WKPHLPV TVL LEEGKECVIVGT+YKHMKLKPTILDEYSKERS
Subjt:  MEIDSLKILYRKQCTYEISDEQYKIQKETYKGQQYSHIYFARLHLMRTILHSLVSNWKPHLPVSTVLGLEEGKECVIVGTVYKHMKLKPTILDEYSKERS

Query:  ATPLVKPHNFVHPDDHLVLEDESGRVKLSGDVLLPSVYVTGTVLALHGKETCVGDFLVLDILEADLPPQIERPLISSEDKYVIFVSGLSIGSSISNPLQF
         TPLVKPHNF+HPDD+LVLED+SGRVKLSG VLLPSVY TG ++ALHGKETCVGDF V DILEA LPPQIERPLI +EDKYV+FVSGLSIGSS SNPLQF
Subjt:  ATPLVKPHNFVHPDDHLVLEDESGRVKLSGDVLLPSVYVTGTVLALHGKETCVGDFLVLDILEADLPPQIERPLISSEDKYVIFVSGLSIGSSISNPLQF

Query:  QLLVDHITGHLGDEKEQGIAAQIVHVVICGNSVEIPRGILNGQHLSAKDQTKLTEPLKELDILLNQLAAGLPVDIMPGSSDPANFSLPQQPLHRCLFPGS
        QLLVDHITGHLGDEKEQGIAAQ+VHVVI GNSVEIPRG+LNGQHLSAKDQTKLTEPLKELDILLNQLAAGL VDIMPG SDPANFSLPQQPLHRCLFPGS
Subjt:  QLLVDHITGHLGDEKEQGIAAQIVHVVICGNSVEIPRGILNGQHLSAKDQTKLTEPLKELDILLNQLAAGLPVDIMPGSSDPANFSLPQQPLHRCLFPGS

Query:  SAYNTFRSCTNPHCFELDNFRQSFGFRFLGTSGQNVDDLEKYSEAKDKLEFMERTLRWRHLAPTAPNTLGCYPFTDRDPFLIETCPHVYFIGNQDKFDTR
        SAYNTFRSCTNPHCFELDN      FRFLGTSGQNVDDL+KYSEAKDKLEFMER+LRWRHLAPTAPNTLGCYPFTDRDPFLIE+CPHVYFIGNQDKFDTR
Subjt:  SAYNTFRSCTNPHCFELDNFRQSFGFRFLGTSGQNVDDLEKYSEAKDKLEFMERTLRWRHLAPTAPNTLGCYPFTDRDPFLIETCPHVYFIGNQDKFDTR

Query:  LIKGAEGQMVRLIAIPRFCETGIAVMLNLRNLECHTLSFGTEFS
        LIKG+EGQMVRLIAIPRFCE G+AVMLNLRNL+CH LSF TEFS
Subjt:  LIKGAEGQMVRLIAIPRFCETGIAVMLNLRNLECHTLSFGTEFS

SwissProt top hits

e value

%identity

Alignment

O35654 DNA polymerase delta subunit 2

5.0e-97

44.78

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Query:  TYEISDEQYKIQKETYKGQQYSHIYFARLHLMRTILHSLV-SNWKPHLPVSTVLGLEEGKECVIVGTVYKHMKLKPTILDEYSKERSATPLVKPHNFVHP
        TY  S + +++ + ++  +QY+HIY  RL  MR  L S    +W   + V  +  L+ G++C +VGT++K M L+P+IL E S+E +  P      ++HP
Subjt:  TYEISDEQYKIQKETYKGQQYSHIYFARLHLMRTILHSLV-SNWKPHLPVSTVLGLEEGKECVIVGTVYKHMKLKPTILDEYSKERSATPLVKPHNFVHP

Query:  DDHLVLEDESGRVKLSGDVLLPSVYVTGTVLALHGKETCVGDFLVLDILEADLPPQIERPLISSEDKYVIFVSGLSIGSSISNP-LQFQLLVDHITGHLG
        DD LVLEDE  R+KL G + + S  VTGTVLA+ G     G F V D   ADL PQ   P + + D++V+ VSGL +G       L  QLLVD +TG LG
Subjt:  DDHLVLEDESGRVKLSGDVLLPSVYVTGTVLALHGKETCVGDFLVLDILEADLPPQIERPLISSEDKYVIFVSGLSIGSSISNP-LQFQLLVDHITGHLG

Query:  DEKEQGIAAQIVHVVICGN----SVEIPRGILNGQHLSAKDQTKLTEPLKELDILLNQLAAGLPVDIMPGSSDPANFSLPQQPLHRCLFPGSSAYNTFRS
        DE EQ  AA +  V++ GN    + +    I   ++L+ K Q    E +K LD +L QL+A +PVD+MPG  DP N++LPQQPLH C+FP ++AY+T + 
Subjt:  DEKEQGIAAQIVHVVICGN----SVEIPRGILNGQHLSAKDQTKLTEPLKELDILLNQLAAGLPVDIMPGSSDPANFSLPQQPLHRCLFPGSSAYNTFRS

Query:  CTNPHCFELDNFRQSFGFRFLGTSGQNVDDLEKYSEAKDKLEFMERTLRWRHLAPTAPNTLGCYPFTDRDPFLIETCPHVYFIGNQDKFDTRLIKGAEGQ
         TNP+   +D      G RFLGTSGQNV D+ +YS  +D LE +E TLR RH++PTAP+TLGCYPF   DPF+   CPHVYF GN   F +++I+G E Q
Subjt:  CTNPHCFELDNFRQSFGFRFLGTSGQNVDDLEKYSEAKDKLEFMERTLRWRHLAPTAPNTLGCYPFTDRDPFLIETCPHVYFIGNQDKFDTRLIKGAEGQ

Query:  MVRLIAIPRFCETGIAVMLNLRNLECHTLSF
        +V L+A+P F  T  A ++NLR+L C  +SF
Subjt:  MVRLIAIPRFCETGIAVMLNLRNLECHTLSF

O48520 DNA polymerase delta small subunit

2.3e-203

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Query:  MEIDSLKILYRKQCTYEISDEQYKIQKETYKGQQYSHIYFARLHLMRTILHSLVSNWKPHLPVSTVLGLEEGKECVIVGTVYKHMKLKPTILDEYSKERS
        MEIDS KI  RKQ  Y   DE+++IQKE Y+GQQYS IYFARLHLMRT+L+SL   WK HLPV  VLGLE+GKEC+IVGT++KHMKLKP +LDEYSKERS
Subjt:  MEIDSLKILYRKQCTYEISDEQYKIQKETYKGQQYSHIYFARLHLMRTILHSLVSNWKPHLPVSTVLGLEEGKECVIVGTVYKHMKLKPTILDEYSKERS

Query:  ATPLVKPHNFVHPDDHLVLEDESGRVKLSGDVLLPSVYVTGTVLALHGKETCVGDFLVLDILEADLPPQIERPLISSEDKYVIFVSGLSIGSSISNPLQF
         TPLVKPHNF+HPDD+L+LEDESGRVKL+G  L P++YVTG V+ALHGKET  G+F V D+LEA LPPQIERP+   EDKYV+ +SGL IGS  +NPLQF
Subjt:  ATPLVKPHNFVHPDDHLVLEDESGRVKLSGDVLLPSVYVTGTVLALHGKETCVGDFLVLDILEADLPPQIERPLISSEDKYVIFVSGLSIGSSISNPLQF

Query:  QLLVDHITGHLGDEKEQGIAAQIVHVVICGNSVEIPRGILNGQHLSAKDQTKLTEPLKELDILLNQLAAGLPVDIMPGSSDPANFSLPQQPLHRCLFPGS
        QLLVDHITGHLGDE+EQG+AAQIVHVVI GNS E PR ++NGQ+L++KDQ+ L EP+KELDI+L+Q+AAG+ VDIMPG++DPANF+LPQQPL+RCLFPGS
Subjt:  QLLVDHITGHLGDEKEQGIAAQIVHVVICGNSVEIPRGILNGQHLSAKDQTKLTEPLKELDILLNQLAAGLPVDIMPGSSDPANFSLPQQPLHRCLFPGS

Query:  SAYNTFRSCTNPHCFELDNFRQSFGFRFLGTSGQNVDDLEKYSEAKDKLEFMERTLRWRHLAPTAPNTLGCYPFTDRDPFLIETCPHVYFIGNQDKFDTR
        S YNTFRSCTNPH F++DN       RFLGTSGQN+DDL KYSEAK KL+F+ERTLRWRHLAPTAPNTLGCYPFTDRDPFLIETCPHVYF+GNQDK+D R
Subjt:  SAYNTFRSCTNPHCFELDNFRQSFGFRFLGTSGQNVDDLEKYSEAKDKLEFMERTLRWRHLAPTAPNTLGCYPFTDRDPFLIETCPHVYFIGNQDKFDTR

Query:  LIKGAEGQMVRLIAIPRFCETGIAVMLNLRNLECHTLSFGTEFS
        LIKG+EGQ+VRLI IP+FCETGIAV +NLRNLECHTLSF T+ +
Subjt:  LIKGAEGQMVRLIAIPRFCETGIAVMLNLRNLECHTLSFGTEFS

P49005 DNA polymerase delta subunit 2

2.5e-96

44.55

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Query:  TYEISDEQYKIQKETYKGQQYSHIYFARLHLMRTILHSLV-SNWKPHLPVSTVLGLEEGKECVIVGTVYKHMKLKPTILDEYSKERSATPLVKPHNFVHP
        TY  S + +++ + ++  +QY+HIY  RL  MR  L +    +W   + V  +  L+  ++C +VGT++K M L+P+IL E S+E +  P      ++HP
Subjt:  TYEISDEQYKIQKETYKGQQYSHIYFARLHLMRTILHSLV-SNWKPHLPVSTVLGLEEGKECVIVGTVYKHMKLKPTILDEYSKERSATPLVKPHNFVHP

Query:  DDHLVLEDESGRVKLSGDVLLPSVYVTGTVLALHGKETCVGDFLVLDILEADLPPQIERPLISSEDKYVIFVSGLSIGSSISNP-LQFQLLVDHITGHLG
        DD LVLEDE  R+KL G + + S  VTGTVLA+ G     G FLV D   ADL PQ   P + + D++V+ VSGL +G       L  QLLVD +TG LG
Subjt:  DDHLVLEDESGRVKLSGDVLLPSVYVTGTVLALHGKETCVGDFLVLDILEADLPPQIERPLISSEDKYVIFVSGLSIGSSISNP-LQFQLLVDHITGHLG

Query:  DEKEQGIAAQIVHVVICGN----SVEIPRGILNGQHLSAKDQTKLTEPLKELDILLNQLAAGLPVDIMPGSSDPANFSLPQQPLHRCLFPGSSAYNTFRS
        DE EQ  AA +  V++ GN    S +    I   ++L+ K Q    E +K LD +L QL+A +PVD+MPG  DP N++LPQQPLH C+FP ++AY+T + 
Subjt:  DEKEQGIAAQIVHVVICGN----SVEIPRGILNGQHLSAKDQTKLTEPLKELDILLNQLAAGLPVDIMPGSSDPANFSLPQQPLHRCLFPGSSAYNTFRS

Query:  CTNPHCFELDNFRQSFGFRFLGTSGQNVDDLEKYSEAKDKLEFMERTLRWRHLAPTAPNTLGCYPFTDRDPFLIETCPHVYFIGNQDKFDTRLIKGAEGQ
         TNP+   +D      G RFLGTSGQNV D+ +YS  +D LE +E TLR RH++PTAP+TLGCYPF   DPF+   CPHVYF GN   F +++I+G E Q
Subjt:  CTNPHCFELDNFRQSFGFRFLGTSGQNVDDLEKYSEAKDKLEFMERTLRWRHLAPTAPNTLGCYPFTDRDPFLIETCPHVYFIGNQDKFDTRLIKGAEGQ

Query:  MVRLIAIPRFCETGIAVMLNLRNLECHTLSF
         V L+ +P F  T  A ++NLR+L C  +SF
Subjt:  MVRLIAIPRFCETGIAVMLNLRNLECHTLSF

Q6AXY4 DNA polymerase delta subunit 2

3.3e-96

44.78

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Query:  TYEISDEQYKIQKETYKGQQYSHIYFARLHLMRTILHSLV-SNWKPHLPVSTVLGLEEGKECVIVGTVYKHMKLKPTILDEYSKERSATPLVKPHNFVHP
        TY  S + +++ + ++  +QY+HIY  RL  MR  L S    +W   + V  +  L+ G++C +VGT++K M L+P+IL E S+E +  P      ++HP
Subjt:  TYEISDEQYKIQKETYKGQQYSHIYFARLHLMRTILHSLV-SNWKPHLPVSTVLGLEEGKECVIVGTVYKHMKLKPTILDEYSKERSATPLVKPHNFVHP

Query:  DDHLVLEDESGRVKLSGDVLLPSVYVTGTVLALHGKETCVGDFLVLDILEADLPPQIERPLISSEDKYVIFVSGLSIGSSISNP-LQFQLLVDHITGHLG
        DD LVLEDE  R+KL G + + S  VTGTVLA+ G     G F V D   ADL PQ   P + + D++V+ VSGL +G       L  QLLVD +TG LG
Subjt:  DDHLVLEDESGRVKLSGDVLLPSVYVTGTVLALHGKETCVGDFLVLDILEADLPPQIERPLISSEDKYVIFVSGLSIGSSISNP-LQFQLLVDHITGHLG

Query:  DEKEQGIAAQIVHVVICGN----SVEIPRGILNGQHLSAKDQTKLTEPLKELDILLNQLAAGLPVDIMPGSSDPANFSLPQQPLHRCLFPGSSAYNTFRS
        DE EQ  AA +  V++ GN    + +    I   ++L+ K Q    E +K LD +L QL+A +PVD+MPG  DP N++LPQQPLH C+FP ++AY T + 
Subjt:  DEKEQGIAAQIVHVVICGN----SVEIPRGILNGQHLSAKDQTKLTEPLKELDILLNQLAAGLPVDIMPGSSDPANFSLPQQPLHRCLFPGSSAYNTFRS

Query:  CTNPHCFELDNFRQSFGFRFLGTSGQNVDDLEKYSEAKDKLEFMERTLRWRHLAPTAPNTLGCYPFTDRDPFLIETCPHVYFIGNQDKFDTRLIKGAEGQ
         TNP+   +D      G RFLGTSGQNV D+ +YS  +D LE +E TLR RH++PTAP+TLGCYPF   DPF+   CPHVYF GN   F +++I+G E Q
Subjt:  CTNPHCFELDNFRQSFGFRFLGTSGQNVDDLEKYSEAKDKLEFMERTLRWRHLAPTAPNTLGCYPFTDRDPFLIETCPHVYFIGNQDKFDTRLIKGAEGQ

Query:  MVRLIAIPRFCETGIAVMLNLRNLECHTLSF
         V L+A+P F  T  A ++NLR L C  +SF
Subjt:  MVRLIAIPRFCETGIAVMLNLRNLECHTLSF

Q9LRE5 DNA polymerase delta small subunit

1.1e-189

72.29

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Query:  RKQCTYEISDEQYKIQKETYKGQQYSHIYFARLHLMRTILHSLVSNWKPHLPVSTVLGLEEGKECVIVGTVYKHMKLKPTILDEYSKERSATPLVKPHNF
        RKQ  Y   DE+Y IQ E Y+GQQYSHIYF RLH MR +LH+LV +WKPHLPV+TVLGLEEGK+C+IVGT+YKHMKLKP+ILDEYSKERSA PLVKPHNF
Subjt:  RKQCTYEISDEQYKIQKETYKGQQYSHIYFARLHLMRTILHSLVSNWKPHLPVSTVLGLEEGKECVIVGTVYKHMKLKPTILDEYSKERSATPLVKPHNF

Query:  VHPDDHLVLEDESGRVKLSGDVLLPSVYVTGTVLALHGKETCVGDFLVLDILEADLPPQIERPLISSEDKYVIFVSGLSIGSSISNPLQFQLLVDHITGH
        +HPDDHL+LEDESGRV L+G  + P+ YVTG V+ALHGKET  G+FLV DILEA +PPQI  P I +EDKYV+FVSGLSIGS   NPLQFQLL+DHITGH
Subjt:  VHPDDHLVLEDESGRVKLSGDVLLPSVYVTGTVLALHGKETCVGDFLVLDILEADLPPQIERPLISSEDKYVIFVSGLSIGSSISNPLQFQLLVDHITGH

Query:  LGDEKEQGIAAQIVHVVICGNSVEIPRGILNGQHLSAKDQTKLTEPLKELDILLNQLAAGLPVDIMPGSSDPANFSLPQQPLHRCLFPGSSAYNTFRSCT
        LGDE EQ IA+ IV VV+ GNSV I     NGQ +++KDQ+++ EP+KELDI+L QL A LPVD+MPGS+DPANFSLPQQPLHRCLF G++ YNTF SC+
Subjt:  LGDEKEQGIAAQIVHVVICGNSVEIPRGILNGQHLSAKDQTKLTEPLKELDILLNQLAAGLPVDIMPGSSDPANFSLPQQPLHRCLFPGSSAYNTFRSCT

Query:  NPHCFELDNFRQSFGFRFLGTSGQNVDDLEKYSEAKDKLEFMERTLRWRHLAPTAPNTLGCYPFTDRDPFLIETCPHVYFIGNQDKFDTRLIKGAEGQMV
        NPH FELD+       RF+GTSGQN+DDL KYS+AKDKLEF+ERTLRWRHLAPTAPN+LGCYP+TD+DPFL+E+CPHVYF+GNQDK++T+L++G E Q V
Subjt:  NPHCFELDNFRQSFGFRFLGTSGQNVDDLEKYSEAKDKLEFMERTLRWRHLAPTAPNTLGCYPFTDRDPFLIETCPHVYFIGNQDKFDTRLIKGAEGQMV

Query:  RLIAIPRFCETGIAVMLNLRNLECHTLSFGTEF
        RLI IPRFC++G+AVMLNLRNLEC TLSF T F
Subjt:  RLIAIPRFCETGIAVMLNLRNLECHTLSFGTEF

Arabidopsis top hits

e value

%identity

Alignment

AT2G42120.1 DNA polymerase delta small subunit

8.2e-204

74.83

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Query:  MEIDSLKILYRKQCTY-EISDEQYKIQKETYKGQQYSHIYFARLHLMRTILHSLVSNWKPHLPVSTVLGLEEGKECVIVGTVYKHMKLKPTILDEYSKER
        MEIDS KI  RKQ  Y  + DE+++IQKE Y+GQQYS IYFARLHLMRT+L+SL   WK HLPV  VLGLE+GKEC+IVGT++KHMKLKP +LDEYSKER
Subjt:  MEIDSLKILYRKQCTY-EISDEQYKIQKETYKGQQYSHIYFARLHLMRTILHSLVSNWKPHLPVSTVLGLEEGKECVIVGTVYKHMKLKPTILDEYSKER

Query:  SATPLVKPHNFVHPDDHLVLEDESGRVKLSGDVLLPSVYVTGTVLALHGKETCVGDFLVLDILEADLPPQIERPLISSEDKYVIFVSGLSIGSSISNPLQ
        S TPLVKPHNF+HPDD+L+LEDESGRVKL+G  L P++YVTG V+ALHGKET  G+F V D+LEA LPPQIERP+   EDKYV+ +SGL IGS  +NPLQ
Subjt:  SATPLVKPHNFVHPDDHLVLEDESGRVKLSGDVLLPSVYVTGTVLALHGKETCVGDFLVLDILEADLPPQIERPLISSEDKYVIFVSGLSIGSSISNPLQ

Query:  FQLLVDHITGHLGDEKEQGIAAQIVHVVICGNSVEIPRGILNGQHLSAKDQTKLTEPLKELDILLNQLAAGLPVDIMPGSSDPANFSLPQQPLHRCLFPG
        FQLLVDHITGHLGDE+EQG+AAQIVHVVI GNS E PR ++NGQ+L++KDQ+ L EP+KELDI+L+Q+AAG+ VDIMPG++DPANF+LPQQPL+RCLFPG
Subjt:  FQLLVDHITGHLGDEKEQGIAAQIVHVVICGNSVEIPRGILNGQHLSAKDQTKLTEPLKELDILLNQLAAGLPVDIMPGSSDPANFSLPQQPLHRCLFPG

Query:  SSAYNTFRSCTNPHCFELDNFRQSFGFRFLGTSGQNVDDLEKYSEAKDKLEFMERTLRWRHLAPTAPNTLGCYPFTDRDPFLIETCPHVYFIGNQDKFDT
        SS YNTFRSCTNPH F++DN       RFLGTSGQN+DDL KYSEAK KL+F+ERTLRWRHLAPTAPNTLGCYPFTDRDPFLIETCPHVYF+GNQDK+D 
Subjt:  SSAYNTFRSCTNPHCFELDNFRQSFGFRFLGTSGQNVDDLEKYSEAKDKLEFMERTLRWRHLAPTAPNTLGCYPFTDRDPFLIETCPHVYFIGNQDKFDT

Query:  RLIKGAEGQMVRLIAIPRFCETGIAVMLNLRNLECHTLSFGTEFS
        RLIKG+EGQ+VRLI IP+FCETGIAV +NLRNLECHTLSF T+ +
Subjt:  RLIKGAEGQMVRLIAIPRFCETGIAVMLNLRNLECHTLSFGTEFS

AT2G42120.2 DNA polymerase delta small subunit

1.7e-204

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Query:  MEIDSLKILYRKQCTYEISDEQYKIQKETYKGQQYSHIYFARLHLMRTILHSLVSNWKPHLPVSTVLGLEEGKECVIVGTVYKHMKLKPTILDEYSKERS
        MEIDS KI  RKQ  Y   DE+++IQKE Y+GQQYS IYFARLHLMRT+L+SL   WK HLPV  VLGLE+GKEC+IVGT++KHMKLKP +LDEYSKERS
Subjt:  MEIDSLKILYRKQCTYEISDEQYKIQKETYKGQQYSHIYFARLHLMRTILHSLVSNWKPHLPVSTVLGLEEGKECVIVGTVYKHMKLKPTILDEYSKERS

Query:  ATPLVKPHNFVHPDDHLVLEDESGRVKLSGDVLLPSVYVTGTVLALHGKETCVGDFLVLDILEADLPPQIERPLISSEDKYVIFVSGLSIGSSISNPLQF
         TPLVKPHNF+HPDD+L+LEDESGRVKL+G  L P++YVTG V+ALHGKET  G+F V D+LEA LPPQIERP+   EDKYV+ +SGL IGS  +NPLQF
Subjt:  ATPLVKPHNFVHPDDHLVLEDESGRVKLSGDVLLPSVYVTGTVLALHGKETCVGDFLVLDILEADLPPQIERPLISSEDKYVIFVSGLSIGSSISNPLQF

Query:  QLLVDHITGHLGDEKEQGIAAQIVHVVICGNSVEIPRGILNGQHLSAKDQTKLTEPLKELDILLNQLAAGLPVDIMPGSSDPANFSLPQQPLHRCLFPGS
        QLLVDHITGHLGDE+EQG+AAQIVHVVI GNS E PR ++NGQ+L++KDQ+ L EP+KELDI+L+Q+AAG+ VDIMPG++DPANF+LPQQPL+RCLFPGS
Subjt:  QLLVDHITGHLGDEKEQGIAAQIVHVVICGNSVEIPRGILNGQHLSAKDQTKLTEPLKELDILLNQLAAGLPVDIMPGSSDPANFSLPQQPLHRCLFPGS

Query:  SAYNTFRSCTNPHCFELDNFRQSFGFRFLGTSGQNVDDLEKYSEAKDKLEFMERTLRWRHLAPTAPNTLGCYPFTDRDPFLIETCPHVYFIGNQDKFDTR
        S YNTFRSCTNPH F++DN       RFLGTSGQN+DDL KYSEAK KL+F+ERTLRWRHLAPTAPNTLGCYPFTDRDPFLIETCPHVYF+GNQDK+D R
Subjt:  SAYNTFRSCTNPHCFELDNFRQSFGFRFLGTSGQNVDDLEKYSEAKDKLEFMERTLRWRHLAPTAPNTLGCYPFTDRDPFLIETCPHVYFIGNQDKFDTR

Query:  LIKGAEGQMVRLIAIPRFCETGIAVMLNLRNLECHTLSFGTEFS
        LIKG+EGQ+VRLI IP+FCETGIAV +NLRNLECHTLSF T+ +
Subjt:  LIKGAEGQMVRLIAIPRFCETGIAVMLNLRNLECHTLSFGTEFS

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGGAAATCGACTCACTGAAGATTCTCTACCGCAAGCAGTGTACCTATGAAATATCGGATGAGCAGTACAAGATTCAGAAGGAGACATACAAGGGCCAGCAATACAGTCA
CATTTACTTTGCTAGACTTCACTTGATGAGAACGATACTCCATTCACTTGTCTCTAACTGGAAACCTCATTTACCTGTTAGCACTGTATTGGGGTTGGAGGAAGGCAAGG
AATGTGTCATTGTTGGAACCGTCTACAAGCATATGAAACTTAAACCTACCATTCTGGACGAGTATTCAAAGGAGAGATCTGCCACCCCACTTGTTAAGCCACACAACTTT
GTGCATCCAGATGATCATCTTGTATTGGAAGATGAAAGTGGGAGAGTAAAGCTTTCTGGGGACGTACTTTTACCTTCTGTGTATGTTACAGGGACTGTCCTTGCATTGCA
TGGAAAGGAAACTTGCGTTGGTGACTTTTTGGTTTTGGACATCCTAGAAGCTGACTTGCCACCCCAGATAGAGCGGCCGCTCATATCAAGTGAAGATAAGTACGTGATTT
TCGTGTCAGGCCTAAGTATTGGGAGTAGCATCTCTAATCCTCTACAGTTTCAGCTCCTTGTTGATCATATAACAGGACATTTAGGGGATGAGAAGGAACAGGGGATTGCG
GCTCAAATAGTTCATGTTGTCATTTGTGGGAACTCTGTTGAAATTCCTCGAGGAATTTTAAATGGGCAGCATTTGTCTGCAAAGGACCAAACAAAGCTGACAGAACCGCT
TAAAGAGCTAGATATCCTATTGAATCAGCTTGCTGCAGGTTTACCTGTGGACATCATGCCGGGATCCAGTGACCCAGCCAATTTTTCCTTGCCTCAGCAGCCTTTGCACA
GATGCCTTTTTCCTGGATCATCAGCTTATAACACTTTCAGATCTTGCACTAACCCTCACTGTTTTGAGCTTGATAATTTCAGGCAATCCTTTGGTTTCAGGTTTCTTGGA
ACATCAGGTCAGAATGTAGATGATCTCGAGAAGTACTCAGAGGCTAAAGATAAACTTGAATTTATGGAGAGGACTTTGAGATGGAGACATCTAGCACCAACTGCTCCAAA
TACTCTTGGTTGTTACCCATTCACTGACCGAGATCCTTTCCTGATCGAGACCTGTCCTCATGTTTATTTTATTGGGAATCAGGACAAGTTTGATACTCGTTTAATAAAAG
GAGCTGAAGGGCAGATGGTAAGACTCATTGCGATTCCAAGATTTTGTGAGACGGGGATTGCCGTAATGCTTAACTTGAGAAACCTTGAATGCCACACTCTGAGTTTTGGG
ACTGAATTCAGCTGA

mRNA sequence

Show/hide mRNA sequence

Protein sequence

Show/hide protein sequence

MEIDSLKILYRKQCTYEISDEQYKIQKETYKGQQYSHIYFARLHLMRTILHSLVSNWKPHLPVSTVLGLEEGKECVIVGTVYKHMKLKPTILDEYSKERSATPLVKPHNF
VHPDDHLVLEDESGRVKLSGDVLLPSVYVTGTVLALHGKETCVGDFLVLDILEADLPPQIERPLISSEDKYVIFVSGLSIGSSISNPLQFQLLVDHITGHLGDEKEQGIA
AQIVHVVICGNSVEIPRGILNGQHLSAKDQTKLTEPLKELDILLNQLAAGLPVDIMPGSSDPANFSLPQQPLHRCLFPGSSAYNTFRSCTNPHCFELDNFRQSFGFRFLG
TSGQNVDDLEKYSEAKDKLEFMERTLRWRHLAPTAPNTLGCYPFTDRDPFLIETCPHVYFIGNQDKFDTRLIKGAEGQMVRLIAIPRFCETGIAVMLNLRNLECHTLSFG
TEFS

PI0000502 (gene) of Melon (PI 482460) v1 genome