CuGenDBv2

Gene ID	PI0000514
Organism	Cucumis metuliferus PI 482460 (Melon (PI 482460) v1)
Description	HNHc domain-containing protein
Genome location	chr04:10237121..10242203
RNA-Seq Expression	PI0000514
Synteny	PI0000514
Gene Ontology terms	GO:0090305 - nucleic acid phosphodiester bond hydrolysis (biological process) GO:0003676 - nucleic acid binding (molecular function) GO:0004519 - endonuclease activity (molecular function)
InterPro domains	IPR002711 - HNH endonuclease IPR003615 - HNH nuclease

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

XP_004141149.1 uncharacterized protein LOC101207660 [Cucumis sativus]

1.6e-109

94.76

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Query:  MAQFTAHSRVKLLLNGDGLPFGSESKDRFRYKLRSVRTRRFPLSGPSSS-TSSTSALRKSTQHAAEVRVGVRDESISGGDDAIVGFDYDYEFESDDLACF
        MAQFTAH+R+KLLLNGDGLPFGSESKDRFRYKLRSVR RRFPLS PSSS TSSTSALRK TQHAAEVRVGVRDES++GGDD +VGFDYDYE ESDDLACF
Subjt:  MAQFTAHSRVKLLLNGDGLPFGSESKDRFRYKLRSVRTRRFPLSGPSSS-TSSTSALRKSTQHAAEVRVGVRDESISGGDDAIVGFDYDYEFESDDLACF

Query:  RGLVLDISYRPVNVVCWKRAICLEFMEKADVLEYYDQTVNSPSGSFYIPAVLRVPHLLQVVKRRRIKNSLSRKNILYRDNYTCQYCSSHESLTIDHVLPI
        RGLVLDISYRPVNVVCWKRAICLEFMEKADVLEYYDQTVNSPSGSFYIPAVLRVPHLLQVVKRRRIKNSLSRKNILYRDNYTCQYCSSHESLTIDHVLPI
Subjt:  RGLVLDISYRPVNVVCWKRAICLEFMEKADVLEYYDQTVNSPSGSFYIPAVLRVPHLLQVVKRRRIKNSLSRKNILYRDNYTCQYCSSHESLTIDHVLPI

Query:  SRGGEWTWEN
        SRGGEWTWEN
Subjt:  SRGGEWTWEN

XP_008465340.1 PREDICTED: uncharacterized protein LOC103502982 [Cucumis melo]

4.0e-113

97.61

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Query:  MAQFTAHSRVKLLLNGDGLPFGSESKDRFRYKLRSVRTRRFPLSGPSSSTSSTSALRKSTQHAAEVRVGVRDESISGGDDAIVGFDYDYEFESDDLACFR
        MAQFTAHSRVKLLLNGDGLP GSESKDRFRYKLRSVR RRFPLS PSSSTSSTSALRKSTQHAAEVRVGVRDES++GGDDAIVGFDYDYEFESDDLACFR
Subjt:  MAQFTAHSRVKLLLNGDGLPFGSESKDRFRYKLRSVRTRRFPLSGPSSSTSSTSALRKSTQHAAEVRVGVRDESISGGDDAIVGFDYDYEFESDDLACFR

Query:  GLVLDISYRPVNVVCWKRAICLEFMEKADVLEYYDQTVNSPSGSFYIPAVLRVPHLLQVVKRRRIKNSLSRKNILYRDNYTCQYCSSHESLTIDHVLPIS
        GLVLDISYRPVNVVCWKRAICLEFMEKADVLEYYDQTVNSPSGSFYIPAVLRVPHLLQVVKRRRIKNSLSRKNILYRDNYTCQYCSSHESLTIDHVLPIS
Subjt:  GLVLDISYRPVNVVCWKRAICLEFMEKADVLEYYDQTVNSPSGSFYIPAVLRVPHLLQVVKRRRIKNSLSRKNILYRDNYTCQYCSSHESLTIDHVLPIS

Query:  RGGEWTWEN
        RGGEWTWEN
Subjt:  RGGEWTWEN

XP_022152374.1 uncharacterized protein LOC111020122 [Momordica charantia]

1.8e-97

87.79

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Query:  MAQFTAHSRVKLLLNGDGLPFGSESKDRFRYKLRSVRTRRFPLS----GPSSSTSSTSALRKSTQHAAEVRVGVRDESISGGDDAIVGFDYDYEFESDDL
        MAQFT  +RVKLLLNGDG+PFGSESKDR RYKLRSV  RR PLS    G S S SS SALRKS QH AE+RVGVRDES+S  D AIVG D DYEFESDDL
Subjt:  MAQFTAHSRVKLLLNGDGLPFGSESKDRFRYKLRSVRTRRFPLS----GPSSSTSSTSALRKSTQHAAEVRVGVRDESISGGDDAIVGFDYDYEFESDDL

Query:  ACFRGLVLDISYRPVNVVCWKRAICLEFMEKADVLEYYDQTVNSPSGSFYIPAVLRVPHLLQVVKRRRIKNSLSRKNILYRDNYTCQYCSSHESLTIDHV
        ACFRGLVLDISYRPVNVVCWKRAICLEFMEKADVLEYYDQTVNSPSGSFYIPAVLRVPHLLQVVKRRRIKNSLSRKNILYRDNYTCQYCSSH+SLTIDHV
Subjt:  ACFRGLVLDISYRPVNVVCWKRAICLEFMEKADVLEYYDQTVNSPSGSFYIPAVLRVPHLLQVVKRRRIKNSLSRKNILYRDNYTCQYCSSHESLTIDHV

Query:  LPISRGGEWTWEN
        LPISRGGEWTWEN
Subjt:  LPISRGGEWTWEN

XP_022932702.1 uncharacterized protein LOC111439170 [Cucurbita moschata]

1.3e-95

86.11

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Query:  MAQFTAHSRVKLLLNGDGLPFGSESKDRFRYKLRSVRT--RRFPLSGPSS-----STSSTSALRKSTQHAAEVRVGVRDESISGGDDAIVGFDYDYEFES
        MAQFTAHSRVKLLLNGDG+PFGSE KDR R+KLRSVRT  RR PLSG SS     S+SS SALRKS Q     RVGVR ES+S GDDAI+  DYDYEFES
Subjt:  MAQFTAHSRVKLLLNGDGLPFGSESKDRFRYKLRSVRT--RRFPLSGPSS-----STSSTSALRKSTQHAAEVRVGVRDESISGGDDAIVGFDYDYEFES

Query:  DDLACFRGLVLDISYRPVNVVCWKRAICLEFMEKADVLEYYDQTVNSPSGSFYIPAVLRVPHLLQVVKRRRIKNSLSRKNILYRDNYTCQYCSSHESLTI
        DDLACFRGLVLDISYRPVNVVCWKRAICLEFMEKADVLEYYDQTV+SPSGSFYIPAVLRVPHLLQVVKRRRIK SLSRKNILYRDNYTCQYCSSHESLTI
Subjt:  DDLACFRGLVLDISYRPVNVVCWKRAICLEFMEKADVLEYYDQTVNSPSGSFYIPAVLRVPHLLQVVKRRRIKNSLSRKNILYRDNYTCQYCSSHESLTI

Query:  DHVLPISRGGEWTWEN
        DHVLP+SRGGEWTWEN
Subjt:  DHVLPISRGGEWTWEN

XP_038905692.1 uncharacterized protein LOC120091663 [Benincasa hispida]

6.8e-105

92.42

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Query:  MAQFTAHSRVKLLLNGDGLPFGSESKDRFRYKLRSVRT--RRFPLSGPSSSTSSTSALRKSTQHAAEVRVGVRDESISGGDDAIVGFDYDYEFESDDLAC
        MAQFTAHSRVKLLLNGDG+PFGSE KDRFRYKLR VRT  RR PLSGPS STSS SALRKS QHAAEVRVGVR ES+S GDDAIV  DYDYEFE+DDLAC
Subjt:  MAQFTAHSRVKLLLNGDGLPFGSESKDRFRYKLRSVRT--RRFPLSGPSSSTSSTSALRKSTQHAAEVRVGVRDESISGGDDAIVGFDYDYEFESDDLAC

Query:  FRGLVLDISYRPVNVVCWKRAICLEFMEKADVLEYYDQTVNSPSGSFYIPAVLRVPHLLQVVKRRRIKNSLSRKNILYRDNYTCQYCSSHESLTIDHVLP
        FRGLVLDISYRPVNVVCWKRAICLEFMEKADVLEYYDQTV+SPSGSFYIPAVLRVPHLLQVVKRRRIKNSLSRKNILYRDNYTCQYCSSHESLTIDHVLP
Subjt:  FRGLVLDISYRPVNVVCWKRAICLEFMEKADVLEYYDQTVNSPSGSFYIPAVLRVPHLLQVVKRRRIKNSLSRKNILYRDNYTCQYCSSHESLTIDHVLP

Query:  ISRGGEWTWEN
        ISRGGEWTWEN
Subjt:  ISRGGEWTWEN

TrEMBL top hits

e value

%identity

Alignment

A0A0A0LG99 HNHc domain-containing protein

7.5e-110

94.76

Show/hide

Query:  MAQFTAHSRVKLLLNGDGLPFGSESKDRFRYKLRSVRTRRFPLSGPSSS-TSSTSALRKSTQHAAEVRVGVRDESISGGDDAIVGFDYDYEFESDDLACF
        MAQFTAH+R+KLLLNGDGLPFGSESKDRFRYKLRSVR RRFPLS PSSS TSSTSALRK TQHAAEVRVGVRDES++GGDD +VGFDYDYE ESDDLACF
Subjt:  MAQFTAHSRVKLLLNGDGLPFGSESKDRFRYKLRSVRTRRFPLSGPSSS-TSSTSALRKSTQHAAEVRVGVRDESISGGDDAIVGFDYDYEFESDDLACF

Query:  RGLVLDISYRPVNVVCWKRAICLEFMEKADVLEYYDQTVNSPSGSFYIPAVLRVPHLLQVVKRRRIKNSLSRKNILYRDNYTCQYCSSHESLTIDHVLPI
        RGLVLDISYRPVNVVCWKRAICLEFMEKADVLEYYDQTVNSPSGSFYIPAVLRVPHLLQVVKRRRIKNSLSRKNILYRDNYTCQYCSSHESLTIDHVLPI
Subjt:  RGLVLDISYRPVNVVCWKRAICLEFMEKADVLEYYDQTVNSPSGSFYIPAVLRVPHLLQVVKRRRIKNSLSRKNILYRDNYTCQYCSSHESLTIDHVLPI

Query:  SRGGEWTWEN
        SRGGEWTWEN
Subjt:  SRGGEWTWEN

A0A1S3CNK0 uncharacterized protein LOC103502982

1.9e-113

97.61

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Query:  MAQFTAHSRVKLLLNGDGLPFGSESKDRFRYKLRSVRTRRFPLSGPSSSTSSTSALRKSTQHAAEVRVGVRDESISGGDDAIVGFDYDYEFESDDLACFR
        MAQFTAHSRVKLLLNGDGLP GSESKDRFRYKLRSVR RRFPLS PSSSTSSTSALRKSTQHAAEVRVGVRDES++GGDDAIVGFDYDYEFESDDLACFR
Subjt:  MAQFTAHSRVKLLLNGDGLPFGSESKDRFRYKLRSVRTRRFPLSGPSSSTSSTSALRKSTQHAAEVRVGVRDESISGGDDAIVGFDYDYEFESDDLACFR

Query:  GLVLDISYRPVNVVCWKRAICLEFMEKADVLEYYDQTVNSPSGSFYIPAVLRVPHLLQVVKRRRIKNSLSRKNILYRDNYTCQYCSSHESLTIDHVLPIS
        GLVLDISYRPVNVVCWKRAICLEFMEKADVLEYYDQTVNSPSGSFYIPAVLRVPHLLQVVKRRRIKNSLSRKNILYRDNYTCQYCSSHESLTIDHVLPIS
Subjt:  GLVLDISYRPVNVVCWKRAICLEFMEKADVLEYYDQTVNSPSGSFYIPAVLRVPHLLQVVKRRRIKNSLSRKNILYRDNYTCQYCSSHESLTIDHVLPIS

Query:  RGGEWTWEN
        RGGEWTWEN
Subjt:  RGGEWTWEN

A0A5D3E2H2 HNH endonuclease

1.9e-113

97.61

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Query:  MAQFTAHSRVKLLLNGDGLPFGSESKDRFRYKLRSVRTRRFPLSGPSSSTSSTSALRKSTQHAAEVRVGVRDESISGGDDAIVGFDYDYEFESDDLACFR
        MAQFTAHSRVKLLLNGDGLP GSESKDRFRYKLRSVR RRFPLS PSSSTSSTSALRKSTQHAAEVRVGVRDES++GGDDAIVGFDYDYEFESDDLACFR
Subjt:  MAQFTAHSRVKLLLNGDGLPFGSESKDRFRYKLRSVRTRRFPLSGPSSSTSSTSALRKSTQHAAEVRVGVRDESISGGDDAIVGFDYDYEFESDDLACFR

Query:  GLVLDISYRPVNVVCWKRAICLEFMEKADVLEYYDQTVNSPSGSFYIPAVLRVPHLLQVVKRRRIKNSLSRKNILYRDNYTCQYCSSHESLTIDHVLPIS
        GLVLDISYRPVNVVCWKRAICLEFMEKADVLEYYDQTVNSPSGSFYIPAVLRVPHLLQVVKRRRIKNSLSRKNILYRDNYTCQYCSSHESLTIDHVLPIS
Subjt:  GLVLDISYRPVNVVCWKRAICLEFMEKADVLEYYDQTVNSPSGSFYIPAVLRVPHLLQVVKRRRIKNSLSRKNILYRDNYTCQYCSSHESLTIDHVLPIS

Query:  RGGEWTWEN
        RGGEWTWEN
Subjt:  RGGEWTWEN

A0A6J1DFU6 uncharacterized protein LOC111020122

8.6e-98

87.79

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Query:  MAQFTAHSRVKLLLNGDGLPFGSESKDRFRYKLRSVRTRRFPLS----GPSSSTSSTSALRKSTQHAAEVRVGVRDESISGGDDAIVGFDYDYEFESDDL
        MAQFT  +RVKLLLNGDG+PFGSESKDR RYKLRSV  RR PLS    G S S SS SALRKS QH AE+RVGVRDES+S  D AIVG D DYEFESDDL
Subjt:  MAQFTAHSRVKLLLNGDGLPFGSESKDRFRYKLRSVRTRRFPLS----GPSSSTSSTSALRKSTQHAAEVRVGVRDESISGGDDAIVGFDYDYEFESDDL

Query:  ACFRGLVLDISYRPVNVVCWKRAICLEFMEKADVLEYYDQTVNSPSGSFYIPAVLRVPHLLQVVKRRRIKNSLSRKNILYRDNYTCQYCSSHESLTIDHV
        ACFRGLVLDISYRPVNVVCWKRAICLEFMEKADVLEYYDQTVNSPSGSFYIPAVLRVPHLLQVVKRRRIKNSLSRKNILYRDNYTCQYCSSH+SLTIDHV
Subjt:  ACFRGLVLDISYRPVNVVCWKRAICLEFMEKADVLEYYDQTVNSPSGSFYIPAVLRVPHLLQVVKRRRIKNSLSRKNILYRDNYTCQYCSSHESLTIDHV

Query:  LPISRGGEWTWEN
        LPISRGGEWTWEN
Subjt:  LPISRGGEWTWEN

A0A6J1F2H9 uncharacterized protein LOC111439170

6.2e-96

86.11

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Query:  MAQFTAHSRVKLLLNGDGLPFGSESKDRFRYKLRSVRT--RRFPLSGPSS-----STSSTSALRKSTQHAAEVRVGVRDESISGGDDAIVGFDYDYEFES
        MAQFTAHSRVKLLLNGDG+PFGSE KDR R+KLRSVRT  RR PLSG SS     S+SS SALRKS Q     RVGVR ES+S GDDAI+  DYDYEFES
Subjt:  MAQFTAHSRVKLLLNGDGLPFGSESKDRFRYKLRSVRT--RRFPLSGPSS-----STSSTSALRKSTQHAAEVRVGVRDESISGGDDAIVGFDYDYEFES

Query:  DDLACFRGLVLDISYRPVNVVCWKRAICLEFMEKADVLEYYDQTVNSPSGSFYIPAVLRVPHLLQVVKRRRIKNSLSRKNILYRDNYTCQYCSSHESLTI
        DDLACFRGLVLDISYRPVNVVCWKRAICLEFMEKADVLEYYDQTV+SPSGSFYIPAVLRVPHLLQVVKRRRIK SLSRKNILYRDNYTCQYCSSHESLTI
Subjt:  DDLACFRGLVLDISYRPVNVVCWKRAICLEFMEKADVLEYYDQTVNSPSGSFYIPAVLRVPHLLQVVKRRRIKNSLSRKNILYRDNYTCQYCSSHESLTI

Query:  DHVLPISRGGEWTWEN
        DHVLP+SRGGEWTWEN
Subjt:  DHVLPISRGGEWTWEN

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT2G23840.1 HNH endonuclease

5.6e-65

58.67

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Query:  MAQFTAHSRVKLLLNGDGLPFGSESKDRFRYKLR---------SVRTRRFPLSGPSSSTSSTSALRK------STQHAAEVRVGVRDESISGGDDAIVGF
        MA F+A  R+KLL + DGL FG +S+D+FR  L           +R  R        S+ S    RK      +T+   ++     +    G DD +   
Subjt:  MAQFTAHSRVKLLLNGDGLPFGSESKDRFRYKLR---------SVRTRRFPLSGPSSSTSSTSALRK------STQHAAEVRVGVRDESISGGDDAIVGF

Query:  DYDYEFESDD-LACFRGLVLDISYRPVNVVCWKRAICLEFMEKADVLEYYDQTVNSPSGSFYIPAVLRVPHLLQVVKRRRIKNSLSRKNILYRDNYTCQY
              E+DD L+CFRGLVLDISYRPVNVVCWKRAICLE+M+KADVLEYYDQTV+SP+GSFYIPAVLRVPHLLQVVKRRR+KNSLSRKNIL RD+YTCQY
Subjt:  DYDYEFESDD-LACFRGLVLDISYRPVNVVCWKRAICLEFMEKADVLEYYDQTVNSPSGSFYIPAVLRVPHLLQVVKRRRIKNSLSRKNILYRDNYTCQY

Query:  CSSHESLTIDHVLPISRGGEWTWEN
        CSS E+LTIDHV+P+SRGGEWTW+N
Subjt:  CSSHESLTIDHVLPISRGGEWTWEN

Sequences

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CDS sequence

Show/hide CDS sequence

ATGGCGCAATTCACTGCTCACAGTCGAGTTAAGTTGCTGCTCAACGGAGACGGTTTACCATTCGGTTCAGAATCCAAAGATCGGTTCAGATACAAGCTCAGATCAGTACG
AACACGGAGGTTTCCTCTCTCTGGTCCCTCTTCTTCTACATCCTCTACTTCAGCTTTGAGGAAATCCACTCAGCATGCTGCGGAGGTGCGTGTTGGTGTGAGGGATGAGA
GCATTAGCGGCGGTGACGACGCCATTGTTGGTTTTGACTATGACTACGAGTTTGAGTCTGACGATTTGGCTTGCTTCAGAGGTCTCGTCTTGGATATTTCCTACAGGCCA
GTTAACGTTGTTTGTTGGAAACGTGCAATTTGTTTGGAGTTCATGGAAAAGGCTGATGTTTTGGAATACTATGACCAGACTGTAAATTCTCCAAGTGGATCCTTCTATAT
ACCAGCAGTCTTGCGGGTTCCCCATTTATTGCAAGTTGTTAAGAGGAGAAGAATCAAGAACTCTTTGAGTCGTAAAAACATACTTTATCGGGACAATTACACTTGTCAGT
ATTGTTCATCACACGAGAGCTTGACCATTGACCATGTTTTGCCCATATCCCGGGGTGGAGAATGGACATGGGAAAACTGGTTGCTGCCTGTGTAA

mRNA sequence

Show/hide mRNA sequence

AGAAAATCTCACAACATGCACGTGCCAGTAGAGATTAGTGGATTAGACGACAAAATAGAGGACTTCAATTTTGTGTTGATAAACAAAATTTTGGAAAACCAAAGATATGA
AGTGAAATGTGCGGGAAAAATATGTGGTGATGAACTTTTCCGTGCGCATGTAATGTTCTTTTCGTCTTCCCCTCAACTACTGGGTTTCAATTTCTTCATCCGATGAGCAG
TAATCTCGACTTCCATCTCTATTGACCGTTCGGAGGAGCGAATTTTGGTTCAGAAATGGCGCAATTCACTGCTCACAGTCGAGTTAAGTTGCTGCTCAACGGAGACGGTT
TACCATTCGGTTCAGAATCCAAAGATCGGTTCAGATACAAGCTCAGATCAGTACGAACACGGAGGTTTCCTCTCTCTGGTCCCTCTTCTTCTACATCCTCTACTTCAGCT
TTGAGGAAATCCACTCAGCATGCTGCGGAGGTGCGTGTTGGTGTGAGGGATGAGAGCATTAGCGGCGGTGACGACGCCATTGTTGGTTTTGACTATGACTACGAGTTTGA
GTCTGACGATTTGGCTTGCTTCAGAGGTCTCGTCTTGGATATTTCCTACAGGCCAGTTAACGTTGTTTGTTGGAAACGTGCAATTTGTTTGGAGTTCATGGAAAAGGCTG
ATGTTTTGGAATACTATGACCAGACTGTAAATTCTCCAAGTGGATCCTTCTATATACCAGCAGTCTTGCGGGTTCCCCATTTATTGCAAGTTGTTAAGAGGAGAAGAATC
AAGAACTCTTTGAGTCGTAAAAACATACTTTATCGGGACAATTACACTTGTCAGTATTGTTCATCACACGAGAGCTTGACCATTGACCATGTTTTGCCCATATCCCGGGG
TGGAGAATGGACATGGGAAAACTGGTTGCTGCCTGTGTAAAATGCAATTCAAAGAAAGGCCAAAAAACCGTAGAAGAAGCAAATATGAAGCTGAAAAAAACTCCTAAGGC
TCCTAAAGATTATGATATACTTGCCATTCCTCTAACAAGTACCGCAATAAAGATGTTGAAACTGAGAAAGGGAACTCCTGAAGAATGGCGTCAATATCTGTCAAGTGAGC
AATGAGCATGTGTGTACTTTTAAGTGGTACTTGTAAATTCTTCTTTGCACATATAGCACAAATTTCACGTAATACTTGGTTCTTCTAAGACTTCTTTATATAGCACAGCA
CCTTCTAAATTTAGCTTAATCTATCATTTGTTCTCATAA

Protein sequence

Show/hide protein sequence

MAQFTAHSRVKLLLNGDGLPFGSESKDRFRYKLRSVRTRRFPLSGPSSSTSSTSALRKSTQHAAEVRVGVRDESISGGDDAIVGFDYDYEFESDDLACFRGLVLDISYRP
VNVVCWKRAICLEFMEKADVLEYYDQTVNSPSGSFYIPAVLRVPHLLQVVKRRRIKNSLSRKNILYRDNYTCQYCSSHESLTIDHVLPISRGGEWTWENWLLPV

PI0000514 (gene) of Melon (PI 482460) v1 genome